ZMP
si:ch73-63e15.2
Ensembl ID:
ZFIN ID:
Human Orthologue:
SBNO2
Human Description:
strawberry notch homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:29158]
Mouse Orthologue:
Sbno2
Mouse Description:
strawberry notch homolog 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2448490]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37491 | Essential Splice Site | Available for shipment | Available now |
| sa37490 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37491
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056032 | Essential Splice Site | 300 | 1452 | None | 31 |
| ENSDART00000137984 | None | None | 729 | None | 13 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 22 (position 17935153)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 17686088 |
| GRCz11 | 22 | 17711066 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGCATCATTCTAGAAAACAACTTAAAGGGAAGGAAAAAAGCACTATGG[T/A]GAGAAGCATCGACATCCAGCACAACTGACCGACTTTACTGGCACACTCAT
Long Flanking Sequence:
TCAATCATTGTTTCATTTGTTTATTTAATATACTGCTCATTTATTTTTGTATTCAGTTTGTTTATTTATTTTGTTTGTTTGTTTCATTTTCAGTAAAACTTTGAACTGTGAGCTACTATCTGACATGATACTATATATATTTTTAATTTACGTTAATTATTCTATAAGAAAATGTTTAATTAAATTAGTTTGCTATTAAATCTGGTAAAAATTATATATTTTATTTATATTCAATTTCAATTTAACGTTTACATTCCTGTCAAACCTTTGCATACAGTCCTAATCATCATACTTTCATAATCAGACATGCTTTTTTTTCCTCATACCTCTATAATAATACATCTCTTGTTTACTTCATTCTCCAGCAACATGAAGTGATTCTGCAGAACAGCCAGCGGGCAGGTTTCCTCATCGGTGATGGCGCTGGTGTGGGCAAAGGCCGGACAGTGGCTGGCATCATTCTAGAAAACAACTTAAAGGGAAGGAAAAAAGCACTATGG[T/A]GAGAAGCATCGACATCCAGCACAACTGACCGACTTTACTGGCACACTCATAACATGATAATCCTTCATAAGATCACTGTACACATAAACACATCTATAATTATTCATACTTATTTTAAGCATTCTGTTTTCCTGGATCTTATGCTGATTTTGCACACTTTTTTTGCTTTGTTTATTTACATGCGCAAGCGTGAAATGTTACAGAAAAAACATTTTTACTGTGGAAATAAACACTATATAAGAAATATAAGTCATTGTAGAATTATTGGCTAGATTTATTTATTCAAAAATACAGTAAATGTGTAAAACTGTAAAATTGTGGACTGTTATTACAATTTAAACTGTTCTTGTTGAATGTACTTATAAATGTTATTTATTCCTGCTATTTACAGCATCATTCCTCCATTCCTCAGTGTCAGATGATCCTTCAGAAGTCATACTTTGTTCTGTTATGATCAATTATTATCGGTACTCAATCACTAATAGTAAATCTTCTAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37490
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056032 | Nonsense | 855 | 1452 | 22 | 31 |
| ENSDART00000137984 | Nonsense | 132 | 729 | 4 | 13 |
Genomic Location (Zv9):
Chromosome 22 (position 17921989)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 17672924 |
| GRCz11 | 22 | 17697902 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAACAAGTTCTTTGGTGCTGACTTTTCATTTGCATTTTAATAGGGAGCTT[T/A]GACTCATGGTGACAGGAGAGCCACAGAGTCTAGAGACCTGAGCAAATACA
Long Flanking Sequence:
CATCCAGCAGTTTGGTGAGTAGCATGCATACCTATAAAATTTGTGGCCATGCACCAGTTATTTTGACTACTCTAAGTAGGACAGTCTTTAGATTAGACTGCAATGCTTTGATGCTGTTAAAAGTGTCTACACCCCCTGTCTACACCCCCAGTCCAATGTAGCAACAATAATTCCACCTGCATCAATCAGGCACAACCTCTAACCTTGCCATCAAAGCTCTCTTACTATAATGAGTGTCATCATACCACAAATACTAACTCACTCTGTTCCTCAGGGCGCACACATCGTTCCAACCAAGTCAATGCACCAGAGTACATCTTCCTTATCTCCGAATTGGCAGGCGAGCGACGTTTTGCATCTATCGTGGCGAAGAGGCTGGAGAGCCTGGTGCGTCCCTGAACTGCTGATTAGCTCTTAACCATTTCATTTATTTTGCAAATATACATATTCAAACAAGTTCTTTGGTGCTGACTTTTCATTTGCATTTTAATAGGGAGCTT[T/A]GACTCATGGTGACAGGAGAGCCACAGAGTCTAGAGACCTGAGCAAATACAACTTTGAAAATAAAGTAAGTAACTGTTTCACATAACACAGAGTAAAACACATGTCATTGACTAACACATTGTTTTGGCTGTTCCTCACAGTACGGTACCAAAGCTCTTGATAAGATCACCAAAACCATCCTTGGTCAAACTGAAAGCAAGGTACCTCCTCCAAAGGACTATCCTGGTGGAGAAGCCATGTTTTTCAGAGGTAAAAGGGCTCTGTTTGTCCATTACTCTCTTAAGATGTGCATTAGCTAGAACCTTAATCTCACCAAAGCTTTTGATGACTCCTTAGATATGAAGTATGGTATGATGGATGTAGGCATGCTGTGCAGTCAGTCCCGCTTGGGCATCAACATTGAAAAAGGTGAGCCTTCTGTTACATTTTTTGCTAAGTGCTCGCATCCACATCTTCTCTCTGACTTTGTGATTCCTCTTTGTGTCAGACTGCAATATCAC
Associated Phenotype:
Not determined