Busch Lab

ZMP

mdn1

Ensembl ID:
ENSDARG00000008976
ZFIN ID:
ZDB-GENE-041001-138
Description:
Novel protein similar to human MDN1, midasin homolog (Yeast) (MDN1) [Source:UniProtKB/TrEMBL;Acc:Q5R
Human Orthologue:
MDN1
Human Description:
MDN1, midasin homolog (yeast) [Source:HGNC Symbol;Acc:18302]
Mouse Orthologue:
Mdn1
Mouse Description:
midasin homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:1926159]

Alleles

There are 23 alleles of this gene:

Allele Name Consequence Status Availability
sa29356 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa4898 Essential Splice Site, Missense F2 line generated Not yet available
sa17093 Essential Splice Site Available for shipment Available now
sa16548 Nonsense Available for shipment Available now
sa45696 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa23696 Nonsense Available for shipment Available now
sa23695 Essential Splice Site Available for shipment Available now
sa23694 Nonsense Available for shipment Available now
sa25134 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa31044 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa43434 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa37021 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa29353 Nonsense Mutation detected in F1 DNA Not yet available
sa1349 Nonsense Available for shipment Available now
sa8598 Nonsense Mutation detected in F1 DNA Not yet available
sa23693 Essential Splice Site Available for shipment Available now
sa6631 Nonsense Confirmed mutation in F2 line Not yet available

Mutation Details

Allele Name:
sa29356
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 219 5553 4 102
ENSDART00000020923 Essential Splice Site 219 5539 4 101
ENSDART00000142323 Essential Splice Site 219 2210 4 43
Genomic Location (Zv9):
Chromosome 20 (position 23923050)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24041851
GRCz11 20 23940951
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGCGGAAGGTTCTTTCCAGTGAAGAGATTCTGCATCTGAAAATGAAG[T/A]ATGTTTGCCAAGCTTTTATTTTATGATGATTTTTCTATATTTGCAGAAAT
Long Flanking Sequence:
GGAACACTGACGCAGCTGATGACCAAGTTTTATTTGTTTACATTTCAGGTTTGCAGCGAGGTATTTCAGCAGCTCTCCTCCAGTATTTCAGAGGCTCTTCTTTACCAGTGAAGAGGCTGCATCCATCCAGTATGGACCCAGACGGATGAAACTACGGGACCTGATGGGGGCCACTCTCCGCTTCCTCCAAAGCGATTGTGAGAAGTTTCGTGTCCTGTGGGACTGGAGTGCCTGTGTTTCACAGCTTCTCACTAGCGACGTCATGGTTAGAAGGTATTGCCAATGAGAAGATCAGACTCGTCTCTAACAAATCCAGAAAACCACTTGAATTTTTCAGAATATCATCACTCTTTGTCTTGGCCTAATCAATGTTTTCTTTCTATTTGTTAAGCTATACTGCCCAGTGCCTTGCCCTGGTGTCCCACATGACAGATAACCAGAAAACAATATTTTTGCGGAAGGTTCTTTCCAGTGAAGAGATTCTGCATCTGAAAATGAAG[T/A]ATGTTTGCCAAGCTTTTATTTTATGATGATTTTTCTATATTTGCAGAAATAACTCAGCGTGAACTAACATGATATTTTTATAGGTCACTTGAGGAGGTACAGCAGCTGGAAGTAGAAAAGGCGCTAGTTTTGGCCAATCAGGGCTCAGCAATATGGCGGAAAGAGAGGGTAAAGAAGGTCACCTCTGGTCAGGTGGTGACAGAAGACCTAACAAAGAGTGTTACTGTGGTATGTGGGGTGATTCTACCTAGACGGACTCCTCGACAAGATGAACAGGCAAGACGATCATATAAAAAGTCAATATTAAGTTAGTGGCATTCTGGGTGTTTTGGGAAGAATTATTGTGTTTTTTAATGTAAATTTGTGTTTCATTGATAGAAATGCTTGAGGAATTTGGTGTTGGTGGATTCAACCTGTCAAAATCTACGGCGACTTGCTATGGCAGTTGCATCCCAGAAGCCCATTCTTTTAGAAGGGCCTATTGGATGTGGGAAAACTGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa4898
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Missense 268 5553 5 102
ENSDART00000020923 Missense 268 5539 5 101
ENSDART00000142323 Essential Splice Site 267 2210 None 43
Genomic Location (Zv9):
Chromosome 20 (position 23922820)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24041621
GRCz11 20 23940721
KASP Assay ID:
554-3510.1 (used for ordering genotyping assays)
KASP Sequence:
CACCTCTGGTCAGGTGGTGACAGAAGACCTAACAAAGAGTGTTACTGTGG[T/G]ATGTGGGGTGATTCTACCTAGACGGACTCCTCGACAAGATGAACAGGCAA
Long Flanking Sequence:
CCTGTGTTTCACAGCTTCTCACTAGCGACGTCATGGTTAGAAGGTATTGCCAATGAGAAGATCAGACTCGTCTCTAACAAATCCAGAAAACCACTTGAATTTTTCAGAATATCATCACTCTTTGTCTTGGCCTAATCAATGTTTTCTTTCTATTTGTTAAGCTATACTGCCCAGTGCCTTGCCCTGGTGTCCCACATGACAGATAACCAGAAAACAATATTTTTGCGGAAGGTTCTTTCCAGTGAAGAGATTCTGCATCTGAAAATGAAGTATGTTTGCCAAGCTTTTATTTTATGATGATTTTTCTATATTTGCAGAAATAACTCAGCGTGAACTAACATGATATTTTTATAGGTCACTTGAGGAGGTACAGCAGCTGGAAGTAGAAAAGGCGCTAGTTTTGGCCAATCAGGGCTCAGCAATATGGCGGAAAGAGAGGGTAAAGAAGGTCACCTCTGGTCAGGTGGTGACAGAAGACCTAACAAAGAGTGTTACTGTGG[T/G]ATGTGGGGTGATTCTACCTAGACGGACTCCTCGACAAGATGAACAGGCAAGACGATCATATAAAAAGTCAATATTAAGTTAGTGGCATTCTGGGTGTTTTGGGAAGAATTATTGTGTTTTTTAATGTAAATTTGTGTTTCATTGATAGAAATGCTTGAGGAATTTGGTGTTGGTGGATTCAACCTGTCAAAATCTACGGCGACTTGCTATGGCAGTTGCATCCCAGAAGCCCATTCTTTTAGAAGGGCCTATTGGATGTGGGAAAACTGCTCTGGTTGAATACCTAGCTGCTGTCACTGGGCACGTTAAAGCCCCTGACATCCTTAAAGTTCAGCTTGGAGATCAGACCGACAGTAAGGTGAGATTTTACATTGACTTCACTTTGCTGCTTCTAGTCTTACCATATTTTATCTGCTGTTAAAGACATTTCTATTACTCTTCTGTCTTCTGTAGATGTTGCTGGGTATGTACCGCTGCACAGATGTTCCTGGAAAGTTTGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17093
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 406 5553 7 102
ENSDART00000020923 Essential Splice Site 406 5539 7 101
ENSDART00000142323 Essential Splice Site 381 2210 7 43
Genomic Location (Zv9):
Chromosome 20 (position 23922233)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24041034
GRCz11 20 23940134
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGTTACTGGATTCTGCTGGAGGAYATTGATCATGCTCCTTTGGATGTGG[T/A]AAGTGCCAAATGTATAAACGCACTAAAGATATTTAAAAAATCCCTAACCC
Long Flanking Sequence:
ATTCTGGGTGTTTTGGGAAGAATTATTGTGTTTTTTAATGTAAATTTGTGTTTCATTGATAGAAATGCTTGAGGAATTTGGTGTTGGTGGATTCAACCTGTCAAAATCTACGGCGACTTGCTATGGCAGTTGCATCCCAGAAGCCCATTCTTTTAGAAGGGCCTATTGGATGTGGGAAAACTGCTCTGGTTGAATACCTAGCTGCTGTCACTGGGCACGTTAAAGCCCCTGACATCCTTAAAGTTCAGCTTGGAGATCAGACCGACAGTAAGGTGAGATTTTACATTGACTTCACTTTGCTGCTTCTAGTCTTACCATATTTTATCTGCTGTTAAAGACATTTCTATTACTCTTCTGTCTTCTGTAGATGTTGCTGGGTATGTACCGCTGCACAGATGTTCCTGGAAAGTTTGTGTGGCAGCCAGGTTCTTTGACCCAGGCCGTCTCAAAAGGTTACTGGATTCTGCTGGAGGACATTGATCATGCTCCTTTGGATGTGG[T/A]AAGTGCCAAATGTATAAACGCACTAAAGATATTTAAAAAATCCCTAACCCTTTCTTAGTTTCTTAGTCTTTAATATTGATTGTATGTGTGGGTGAAGACTTTTTATAACTGGGTTACAGGAGCTTTATATTATGTAGAGTTCTGTGTTTACAAGTTATGTAGGAATTGCACAATTCTCAATATAATATTGAACTCTTCAAGTACGACATCCATGGTTCAATACACGCTTGTGAATTTTTTTTTTTTTAGTTTTACGTTTAAAATTTATTTATTTACTTTTTTTTCTCTCTGAATTGACTGTTTGTGTGTTTCTGTAGGTCTATTAGCTGAGTAAATATTCAATCACTGTGCTCTAATGGCTCGTTTCCACTGACTGGTACAGTACGGTACAGTTCGGGTCGGTACGGGTCACCTTTATAAGGCTTGCATTTCCACTTCCAAGGGTACCCTTTTGGTGGGAGTGGTGTATGACAAAGTTTCAGTCGACGTCATTTTCACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16548
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 1784 5553 37 102
ENSDART00000020923 Nonsense 1785 5539 36 101
ENSDART00000142323 Nonsense 1635 2210 33 43
Genomic Location (Zv9):
Chromosome 20 (position 23896632)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24015433
GRCz11 20 23914533
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCTTGCCAAGGCTTCTGGGAACCATCYTGTCAGGAWCAACCTTTCTGAA[C/T]AAACCGTATGTCAAAGAAATTAGCCAAACACTAATATTGACATATACAAA
Long Flanking Sequence:
ACCACAGTGTCAGCAGCAGAGAATGCACTGGTGGCACGCAAGTTGAGTCTGGAATACCTGGAGAAGAGACTAAGCAGAATAACAGAGCTGGATGAGGAGATGCAGGAAGCTATCAGAGTCTACAACACCAGCGTCTCCAGAGAGCCCCAGTGGGGTGAAGGGTTCTTTGGCATCGACCCCTTCTATATTGCTGCTGGTGAGAATTTACAGAGACAATTAATTATTTAAAGTCATCAAAAATGACTGTCCAATAAAGTGCTACTCATTTGGAATCTCCTAATACTTAATCTACCCCAGGTTCTGAGAGTGAAGGCAGAAGTCTGTCGGACTATGCTCTGAGTGCGGGCACCACTGCAGTGAATGCCCAGAGGATTCTGCGGGCACTGAAGCTTCAGAGACCCATACTGCTTGAGGGCTCTCCTGGAGTGGGCAAGACTAGCCTGGTTGCTGCCCTTGCCAAGGCTTCTGGGAACCATCTTGTCAGGATCAACCTTTCTGAA[C/T]AAACCGTATGTCAAAGAAATTAGCCAAACACTAATATTGACATATACAAATATTATATTAGATTTCTCATCAGTTTTAGATCACGTAGTGTATAGTTAGTAGTGTTTAACTAGTGTATAGATTTCAGTAGTGTGTTAATCATACTGTTTTCTCTCTGCACAGGATGTAACCGATCTGTTTGGGACAGATCTGCCAGTAGAAGGTGGGAAAGGAGGGGAGTTTGCATGGCGTGATGGCCCCTTACTTGCTGGACTGAAGGCTGGACATTGGATTGTTCTAGATGAGGTGCAAAAAATGTTTGATTGAATGTTTATAACCCTGTTTATAACTAACCAAATCTTGAATGTTTTTGGGTAGAATTAGCTGATTTGGTAGAAGACTGTTGGTTAATCCTATCCCTCTCATCTGCTCAGCTGAATCTGGCCTCTCAGTCAGTTCTGGAAGGTCTCAACGCATGCTTTGACCATCGTGCTGAGATCTATATCCCAGAGCTGGGCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45696
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 2198 5553 44 102
ENSDART00000020923 Essential Splice Site 2199 5539 43 101
ENSDART00000142323 Essential Splice Site 2049 2210 40 43
Genomic Location (Zv9):
Chromosome 20 (position 23892517)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24011318
GRCz11 20 23910418
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCATTGTTCTGCTGCACAAACTCAACACTAAACTCAAGGTCTTCACAGG[T/C]CAGGACACCTATAGTTTGCCTTGCAAGTTTGAATAGTTTTCTGTGACTGT
Long Flanking Sequence:
GCTTTATAAAGGTGTCAATCAAGCTCAGGCCGAATTCTGTCGGGCTCGGGTCCTTTTGGGCCTAATTTTTATGACCGATTGCAGCTTTATCAGATTGTACTAAGTACAATACAAGTACAATGTAGGGCAGATTCCCCCAAAAATGTATCACCTAAAATTAATCAAGTGTTTTGCACTCCATCTATTAACTTGATGTTATAATCTTTTTTTTTGTTTGTTTGTTTTTTTTTTTAGGTGGACATCATACGACCCTGGCAGCAGGTCTTGGAAAGCATGGACTATGTTGTTGCCATGGTGACCAGGCGAGGGCTGATGTCACTTGACGGAGCCGTGCAGGACACTGAGTTTCTGTTAAGCACCTGGAGCACTTTCCGCCGATGGCTGAGAGAGGAGGGGCTAGACACCACTGAGGGCCAGCTCACATTTGAGGCTTTAAACAAACTGGAGGTCATCATTGTTCTGCTGCACAAACTCAACACTAAACTCAAGGTCTTCACAGG[T/C]CAGGACACCTATAGTTTGCCTTGCAAGTTTGAATAGTTTTCTGTGACTGTTTTTCGTTTTAGTTGAATTGTCAACAGGAAAATTATTGACCTAACAATTTTTAACTAGCTTTACAAATAAGTATAAATGTGTTTATTTTTTATTTTAAATAACAAATGTTAAGAAAAAACTGTACAAAAGCACGCACATCTCTCTTAATTGGGTGCTCAGCCAAAACCGCAAAAAGTGCAAATTAAATGTAAATCAAAGGCGGCAACACCAAGGCTCCAAAAATACAAATTTATTAAATTAAAAAGGCTGACACAGAGCGTGTAACGTTTCGAGCCACCCGGCTCTTCATCAGACAGTCTTTTGATTTACATTTAAATAACAAATGTTAAAAATTTGTATTATCATTAAAAAAATTTAATTGTAAAATTTGAATTTGTACATATGAAATCAATTCAATTATTTAAAAAAAAAACCTTACTTTTTATTAAAACATGACATTAAGTGTCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23696
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 2439 5553 49 102
ENSDART00000020923 Nonsense 2438 5539 48 101
ENSDART00000142323 None None 2210 None 43
Genomic Location (Zv9):
Chromosome 20 (position 23889486)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24008287
GRCz11 20 23907387
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTGCTGGACTCTGAGGACTGGGGCAGTGGGTTGTTGTGTGCAGGCGTTT[G/A]GCCAGACCGCATCCCTTCAGCGCTCATGTGCACAGAGGACTCGTGTTTCT
Long Flanking Sequence:
AAAAATGTTGGAAAAAACAGACATTGGCTTTCATAGTATTTTTTTGTTCCTTCTGTGGATGTCAGCGGCTGCTTTTTTCAACATTTTTCAGATCATCTTGTTTTCTGTTGAACAGAGGAAAGAAATGGATATTTTAAATATGTTTATTTGGATATTCTATCTCTACCATTTTCTAGACTCTCCTGCGTCCTCCATGTCCTCTCTTCTTCATGCTGCGTCACTGTTGTCTGGTCAGCTCCAGAGAGGAGTGGATCTGCCCAGTGCTCTTCTGCAGGCCTGTGGAGAGGCTTATGCTTTCTGCCAGCGCACCATCGCTAACCAGCAGGTTCGCTGTCATTTTTCATAAACAGCGACAAGATAAATGATGCCAGAATTTTTTAATTATGTCTGATCTAACCCACCTCTCTCTTTCTCTCAGCTGGCACAGGAAGTCATAGAGAGGCAGTTGGCAGTGCTGGACTCTGAGGACTGGGGCAGTGGGTTGTTGTGTGCAGGCGTTT[G/A]GCCAGACCGCATCCCTTCAGCGCTCATGTGCACAGAGGACTCGTGTTTCTCCAGTGTTCAGAGAGATGGTCAAGTCCTCCTGTACTGCCTCAATACCCTCAGCTTGTATGGAAAAAGGTCAGAACTACACTGTATAATTTTTAATCTCATTATCGCCACTTTATTATATTTAAAGGCAAAGTATGAACAATTTATTTCATTAAAAAATTCCAAAAAATACTACAACAGAATTTTTACTAGTGACACGGACCGTATCCTTCTGTATGGCCATGCTAATGATGTCATACACTCCCACTTTCCGGTTTGGTTTATAGAGAACGAGGTTATATAAGTCGACTGTGTCATAACAAAAGCTTCCCTACTTTTAGGCCACATCATGCTTGTCTCTTATCCACAGTCTTTTTTTTCACTTTGACAGCTTTCAGCATGCTTAATGCTACCATGATTATAATTTTTGAAAACTTTAGCTCATCCATGGACATGATTTCTCTTAGTATGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23695
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 3300 5553 63 102
ENSDART00000020923 Essential Splice Site 3300 5539 62 101
ENSDART00000142323 None None 2210 None 43
Genomic Location (Zv9):
Chromosome 20 (position 23882367)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 24001168
GRCz11 20 23900268
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGCTTGAAGAGAGTAGCACAACTGACAACTTCCAACATCCTCGCATTAG[G/A]TAATGAAACATTCAGAATTTTTCTCTTAGAGATTGTCACTTAGGTTTATA
Long Flanking Sequence:
CAATTTACCTTAGCCATACCCATCCAAACTTTATACTGGGTTAACTGGTTAACTGCTGTGTCAAATCACTTGCTATAGATTACTTGTGGGATGTTTTTCCCCTCACGCAAAATCTAATTTTAAATCTAACAGTTGAATTTTTTGAACTAGTGTAGAAGATGCAGCAAACACATGTCATTCTTGACATTTATAACACATTTCCATTGACTTTTATTTAATCCGCTTAATAAATACTTAAATTTGCATGTATATGATGACAGAAAAAGCCCAAAAATAAGCCCCACCTCCTACTCAATATTTTTTGTCTTTTGGAAATGTCAACATACTGAAATAAAAGTTGACTCAGACTTAATTCAGATCAACTTGAGATGTCTTTGTGTGTTTCAGCTTGCTTTGCTACAGGAGGAGTGGAGAGGGCGGAGTCTCTCCTCACAGCTGCTTACAGGGGCGGAGCTTGAAGAGAGTAGCACAACTGACAACTTCCAACATCCTCGCATTAG[G/A]TAATGAAACATTCAGAATTTTTCTCTTAGAGATTGTCACTTAGGTTTATATGGATGCAGAAAATATCACTATTATATAAAATAGTAGGCAGTAATAAATATGTTAAGAAAATATTATTTGATGTCAAATAAATTTATGTTCAACTTCTATTTAAAACCTATTATACAGATTTACATAATGCATTGCATTCGATATCAGTACCATATTAGATTTTCACCCTGTACAAACCAATATTGGATATTTAACTGTTTGTGCTACTGTAGATATCAGGAGCATATCAGTCAATATGAGAGATGATCAGCTAATATCAACTTATATTGGGTATTTTAATAGTTTGTGCTCAGGTCTATGTTTTACAGCTTACTCTGCGAATGTGTGTGCATACAGAAGGTATTGGTGCTGTACCTTATCAGTTATCAGCCTTTACTAACCAAAACTGCATAATTAATTCTGCTGTTTTTACTGCTTATACATGAATGTGTATGAATGTTGGATTTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23694
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 3414 5553 64 102
ENSDART00000020923 Nonsense 3414 5539 63 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23880795)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23999596
GRCz11 20 23898696
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCTTTATCCTGATGTGGTGGTGCCTCTGCGGGCAGCTATTTTGCAGGTG[C/T]AGCATGGGATGCGACTCCTGGCTTCTCAGGTGTCCTTTTCAACGACTGCC
Long Flanking Sequence:
TGTGGTGCTCTGATTAATGTAAATGTTTTATTAATGAATATGTGTTATTTAACATGTTTGGGTGTGCACAGGGGCGCAGCAGTGTTGAGGATCTATGGTTTATCGCTATTGAATTTTAACTACAATTTGAGATGTCTTTTGTTGTATGTGATGTTTGTAGGTACTTATGGATCCGCATGCAGCAGGTAAAGGAGCAGATTTGTGAACTGAGCCGTAAACAAGCTTACCGTCCTCCTGAACCTCAGTACGGGCGCCTGTATCAGGAACTCCAGCACTACCTGTGCAGCATCGGGCAACCAGCTGCAGTGGGTGACCTGCTCTCACACCTCCTGAAGGCCCTACAAGCCCCAGGACCAAAATCTAAGCTAGGCGTTCAGGGTTTGTTGAAAGAGGAGGCCGTCTGGCAGGCTTCACAGCACCGCTTCTCCCAGCGGCTGCTTGAGGAATTCCCGCTTTATCCTGATGTGGTGGTGCCTCTGCGGGCAGCTATTTTGCAGGTG[C/T]AGCATGGGATGCGACTCCTGGCTTCTCAGGTGTCCTTTTCAACGACTGCCCAACCAGGTCTGGTGCACCTTGTGTCCACTATGCTTACTTTTCCCTGTCCAGTAGCATCCTCTGATCTGGCCTGTGCAGATTACCTGTGTTCAAGGGAGTGCTTGCGTACACTGAAAACACTGGGAAAGCAGCTGCCAGCTACAGAGGTCAGCCGTGTGATCCCAGATCATGCAGTGCTGCTGCTGAACGCACTGCTGTACATACAGAGTCACACACTGAGTGCTGGACAGCTCAGTGCAGAGGCGCAAAAGCTTTTCAGACATGTTTGCCAGGTGAGATATGGAGTAAACATATGACAAAAATGATAAACAATTGCAAATTTCAATTATATTTAAAACCTATGTATTTATAATTGATAGATGAAATAGATAGATAAAATGCTGTTGTACAAAACATCATTACATCATTTGTATCAGTGTTGACGTATATATTCATATTGTTTAAATACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25134
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 3968 5553 None 102
ENSDART00000020923 Essential Splice Site 3968 5539 None 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23875882)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23994683
GRCz11 20 23893783
KASP Assay ID:
554-7375.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCTCTAATCAACTAAATGTTTTAAAAATTATACCATTCTATCTGTGGTC[A/G]GGACCCTGTTTAAGTTTGTGAAGAAGTTTGAAGCGGCACTGAAGGAGCCG
Long Flanking Sequence:
TGATGACCAAAATAAATTAACGTGTTCTCTTTATCCTCTCAGACTCACTGTGCAGTTTGCTGTGGAATCTCTATAAATACTACTCACAGTTTTCACCGAGCATTCAGACCAAAATCACCCACTTGAGGTCTCCTTTAGAGAAAGAGCTAAAGGTAGGTGAAAATAAAGCAATCTAGACTGACATGGTGTAAAATTCTGGGTTTTTTTTCTCTTTTAATTTATTTGATGTAATGTTTATCTCTTGAAATACAGGACTTTGTTAAAATCTCCAAGTGGAATGATGTCAGTTTTTGGTCCATCAAGCATTCAGTGGAGAAGACACACAGGTGAGGGTGACAGACAGACTACATGTGTTTTGTTTTGTAATAGTATTTCACACTACATTCACCTTAAAGTACATCATTAGCTTGATATGTTTATGTTGTTTGCTACATAGTGCTAAAGCAATGTATCTCTAATCAACTAAATGTTTTAAAAATTATACCATTCTATCTGTGGTC[A/G]GGACCCTGTTTAAGTTTGTGAAGAAGTTTGAAGCGGCACTGAAGGAGCCGTGTGCACCGTGTCTGGTGGAGCAGGGCAGTAGCAGCAGCATGGATGATGTGGATTCACAGCCTGAGGAGACTCCTCTTCTCAGGGTTCACAGAGCGCTGAAAGAAGCCCTTCCTGGAAAAGGCAGAGATCTGCAGGTGCCATAACCTTAAGATAAACGAACATTTATTACAGCTAACTTCACAGTTAACATTCATTTCCAGCATGATGTTTGATTTTTATTTAAACACTCTTCATGCATCAGGCTGATGGTCCAGAGGAACTGTCTTCTGAAAATCCTTCATCTCTGCAAGCCCGTCTGCCTGTCCTCACCAGGAAGATGAAGAAGTTGTGTGTGCAGCTGGTGAAGAAGACCTCTCTGCCTGAACTATCAGAAGACCTAGATCAGTTCACAGGTATCAAAGCTTGAGAACTTCTAGCGGACTTGTTGAAACTAGATTCTTTGTTGCTGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31044
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 4129 5553 None 102
ENSDART00000020923 Essential Splice Site 4129 5539 None 101
ENSDART00000142323 None None 2210 None 43
ENSDART00000004209 Essential Splice Site 4129 5553 None 102
ENSDART00000020923 Essential Splice Site 4129 5539 None 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23874702)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23993503
GRCz11 20 23892603
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAAACAGAGAGCACTGGCTGATCTCTTCAAGATGCTTGCACAGATAGG[T/C]CAGTCTGAGTTGCTTCTTCTGGTTTTAGAAACCTTGTTTAGAAATACTCA
Long Flanking Sequence:
AATCTGTGCCATTTTTGGACTGTCACTCACAATTTAATTGAGATTTTGCTCTCAAAAGATGGCAAAACTACAAATTTGTCAGCATAGTGGCAGATTCAAAAACACGGCTAACGTCCTATGCTAATGAGGGAGAGGTCTTCGCTAATGGGCGGGGCTTTCTGATGACACGTACAAAGGAAGAATCGATTAAAAAGATTACAAGAAATCAAATTAATACCGTTTTACCATTAGAAGTGTGTTATATTCACAGACTGTTGACACACATAGCTCCTCTTAAAAGGCTTAATGTATGAGATTTGCAAATCTCTTAAGAAGCAGAAAAGGTGTAATTGTCCCTTTATCTGTGTTCCAGCCGAGATCATTTTGAATGTGCAGGCCCTGCAGGGCCTGACGGTGGACCGCAGCATGGAGCAGGAGAAGCAGAAAGCAGAGGTGAAACACATCCTTCAGCAGAAACAGAGAGCACTGGCTGATCTCTTCAAGATGCTTGCACAGATAGG[T/C]CAGTCTGAGTTGCTTCTTCTGGTTTTAGAAACCTTGTTTAGAAATACTCATGGTCATGGAAGATGTGAAAATAGTATTACAATCTAGGTCTTATTATAAAATGATTATTTGTTTACATTTTATTAGTATTTTAACTATATTATTTGCATTACTGTTTTATTATAATATGCATTACAAATGTTAATATATACATTTTGATAGATATTTATATTTTTCTCTACACTACTGTAAAAAAGACCATATTAAAGGTGATATTGCTATGTGAAGTATATTACATGCAGATTGATTATGTTTCATTTCGGTTCAGGTCTGTCCTACCGTAAAGGTCTGACTTGGAGTCGTACAGCAGATTCAGATGAAACGGTGTGTCTTCAGCCAGTGGAGATAAAGGTTGCCCTGTCCGCAGTCAAGACAAATGACAACAGTGAGCAAATGTATGTAATCATCATCATCATCTACACATTTGTGTTATTCATAGAGCTAATGGTCAGAACCAGATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43434
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 4129 5553 None 102
ENSDART00000020923 Essential Splice Site 4129 5539 None 101
ENSDART00000142323 None None 2210 None 43
ENSDART00000004209 Essential Splice Site 4129 5553 None 102
ENSDART00000020923 Essential Splice Site 4129 5539 None 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23874702)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23993503
GRCz11 20 23892603
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAAACAGAGAGCACTGGCTGATCTCTTCAAGATGCTTGCACAGATAGG[T/C]CAGTCTGAGTTGCTTCTTCTGGTTTTAGAAACCTTGTTTAGAAATACTCA
Long Flanking Sequence:
AATCTGTGCCATTTTTGGACTGTCACTCACAATTTAATTGAGATTTTGCTCTCAAAAGATGGCAAAACTACAAATTTGTCAGCATAGTGGCAGATTCAAAAACACGGCTAACGTCCTATGCTAATGAGGGAGAGGTCTTCGCTAATGGGCGGGGCTTTCTGATGACACGTACAAAGGAAGAATCGATTAAAAAGATTACAAGAAATCAAATTAATACCGTTTTACCATTAGAAGTGTGTTATATTCACAGACTGTTGACACACATAGCTCCTCTTAAAAGGCTTAATGTATGAGATTTGCAAATCTCTTAAGAAGCAGAAAAGGTGTAATTGTCCCTTTATCTGTGTTCCAGCCGAGATCATTTTGAATGTGCAGGCCCTGCAGGGCCTGACGGTGGACCGCAGCATGGAGCAGGAGAAGCAGAAAGCAGAGGTGAAACACATCCTTCAGCAGAAACAGAGAGCACTGGCTGATCTCTTCAAGATGCTTGCACAGATAGG[T/C]CAGTCTGAGTTGCTTCTTCTGGTTTTAGAAACCTTGTTTAGAAATACTCATGGTCATGGAAGATGTGAAAATAGTATTACAATCTAGGTCTTATTATAAAATGATTATTTGTTTACATTTTATTAGTATTTTAACTATATTATTTGCATTACTGTTTTATTATAATATGCATTACAAATGTTAATATATACATTTTGATAGATATTTATATTTTTCTCTACACTACTGTAAAAAAGACCATATTAAAGGTGATATTGCTATGTGAAGTATATTACATGCAGATTGATTATGTTTCATTTCGGTTCAGGTCTGTCCTACCGTAAAGGTCTGACTTGGAGTCGTACAGCAGATTCAGATGAAACGGTGTGTCTTCAGCCAGTGGAGATAAAGGTTGCCCTGTCCGCAGTCAAGACAAATGACAACAGTGAGCAAATGTATGTAATCATCATCATCATCTACACATTTGTGTTATTCATAGAGCTAATGGTCAGAACCAGATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37021
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 4385 5553 None 102
ENSDART00000020923 Essential Splice Site 4385 5539 None 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23872303)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23991104
GRCz11 20 23890204
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGGATGGACTGGCGGAGGAGTCCACAGAAAGAGCTATTTGTAGTTGG[T/C]AAGACCGAATAATATTTTACACTCTGTCTGTTCAGTTATTGAGTTGTGCA
Long Flanking Sequence:
GAAATGAAACAAATCAGACATTGAAAATCTTGTTCACTTTCATACATCTTTTCTGATAACTTTCTGTTCTAAACAATAGGAAATTGATCAGCAGTGTCCAGAGCATCCAGTCCCCGAGCTCTGAGTCTGGCTGTGATGTCAGCGGTGTCCCTCCTCAGGACTCTCTCCAGCACTGGATCCGCAGGGCTCAGTCTTCAGCCCTGCACTGCTCTGTTGTGCTCCAGCAGATCTCCTGGCTCCTCCAGTGCTGTCCTGAAAGCTCTTCTGTCGCCCCCGCTGAGGCCAGAGAAGGAGAAGCCATGCAGGGTCAGGCCACACTGAGCCACCCGTCTCCTTTGGCTCCGCACCTCCAGCCACAGGCCTGTCTACTGCGCAGAGGAGAGCAGGGGTGGAAGGTGATTGAGCAGAAGGTGGAGAGTCTGATAAAAGAAGTGAAAGATCTGAAAATGAAGCTGGATGGACTGGCGGAGGAGTCCACAGAAAGAGCTATTTGTAGTTGG[T/C]AAGACCGAATAATATTTTACACTCTGTCTGTTCAGTTATTGAGTTGTGCAAACATCAATTTATTTAATTATAATAATATTTGTGATTAAAATTTAAATCATTATTTGAATTTTGTTTAAGTTGTCACCTCTAGAAAATTGATCAAATATATATTTTTTCTGTCTAAATCAAGTCCTTCAAAATTCATCAGATATGCCTGTTTCTTTCTCTTTTGTTTTAGCTTATTTGAACTAATTTTATTTAGACCTTGAAAAATCATCAATATTTCTCTGTCTAAATTGGTGTTTAAATTTAATTTCTTTATTAACTCTAGAGAATCAATCAGTTGAAAATTTAATGACAATAATGAGATTTATTATAAATATTATTTATTTATTTTTAGACCTAGAAAATCATCACTCTATCATCACTATATTTATATATTATTTTTTTTTTTTCAAAATTAGTATTTTACACTCTTACATCTAAAAAAGTGATCAATTCAAAACATTTTAAATTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29353
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 4522 5553 83 102
ENSDART00000020923 Nonsense 4513 5539 82 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23870802)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23989603
GRCz11 20 23888703
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATTTATGTTTTTTTATAGAGAGTGACTCAGAGGTAGTGGAGGAGCTCT[T/G]AAAACCAGGACACTTGAGCAGGTTGCTGGAAGAGGAACTGAGTGGAGACT
Long Flanking Sequence:
AAAAATTACAAACTGGTAAATTCCTTTAAAGTATTTAAATAATACATTTAAAAACACAGGTTGAAATGGGGGTGAAAACTATAATAAAATAATATTGATTAAATGAGCAGTGAAAAAATGCTGAATTATTTTTATGTTATTTTATTATATTTGTAAAATCTTAGTTGCATTATTTTTACAATCATTTTTAGGTGCAATCTATATTTATCTATTATTTCATTTTCCCTTATTTTGTCTACATGCAGGACATTCCCATCCATTTTCTGTTGAGTTCTCTGGGCAGCTGGAGAAAGCAATAAACATGGTTTTGTGTGCGGTTCAGACAGTAGTTAAGAGGAAGGAGAAGGAAAAGCAGGAGGATCAGCTGTCAGAAAGCAAGAGAGGTGCAAAATCAGCCATGAATTTGCATACGGCATGTTTTAGGAGATATATTTGTGTATATATGAGAGCTCATTTATGTTTTTTTATAGAGAGTGACTCAGAGGTAGTGGAGGAGCTCT[T/G]AAAACCAGGACACTTGAGCAGGTTGCTGGAAGAGGAACTGAGTGGAGACTTGTCCAGTCTCTCATTACCCGAGATCAATGGAGTCGTAACAGAGCTGCTGGAGAGACTTCGTTCACACAGGGACGACTGTCAGCCTCACCATTTACAGGTCAGTCATGCATTAAATATACATTAAATATTATACCCAAATGGTTACTGTCTGAAAATATCAGTTAAAATGTGTGTTGTTTTATATAAAGGAATTGAGAGAGGCTTGCAGGAGTGTGGTGCGTTTGGAGCCCATGCTGTGTCTCTACTCTGAATTGGTGAGGTATTATCTTGCTGTGCTGATGGGGGCTCACCGTACCACCGGAAAGCTTTTGTCCGTCCTCGCTAATGTCTTCACTGAACTTGCACAAAAGGTAGATGTTGCTCTGCCTGCTTGCACTGCTTACTACAGACAGAGTTGCTCAAATTTCGGTTGTTACTACCTGTTTCTTTCTCATTTTGGTCAATTGTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1349
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 4597 5553 84 102
ENSDART00000020923 Nonsense 4588 5539 83 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23870485)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23989286
GRCz11 20 23888386
KASP Assay ID:
554-1263.1 (used for ordering genotyping assays)
KASP Sequence:
GTGCGTTTGGAGCCCATGCTGTGTCTCTACTCTGAATTGGTGAGGTATTA[T/A]CTTGCTGTGCTGATGGGGGCTCACCGTACCACYGGAAAGCTTTTGTCCGT
Long Flanking Sequence:
TTCAGACAGTAGTTAAGAGGAAGGAGAAGGAAAAGCAGGAGGATCAGCTGTCAGAAAGCAAGAGAGGTGCAAAATCAGCCATGAATTTGCATACGGCATGTTTTAGGAGATATATTTGTGTATATATGAGAGCTCATTTATGTTTTTTTATAGAGAGTGACTCAGAGGTAGTGGAGGAGCTCTTAAAACCAGGACACTTGAGCAGGTTGCTGGAAGAGGAACTGAGTGGAGACTTGTCCAGTCTCTCATTACCCGAGATCAATGGAGTCGTAACAGAGCTGCTGGAGAGACTTCGTTCACACAGGGACGACTGTCAGCCTCACCATTTACAGGTCAGTCATGCATTAAATATACATTAAATATTATACCCAAATGGTTACTGTCTGAAAATATCAGTTAAAATGTGTGTTGTTTTATATAAAGGAATTGAGAGAGGCTTGCAGGAGTGTGGTGCGTTTGGAGCCCATGCTGTGTCTCTACTCTGAATTGGTGAGGTATTA[T/A]CTTGCTGTGCTGATGGGGGCTCACCGTACCACCGGAAAGCTTTTGTCCGTCCTCGCTAATGTCTTCACTGAACTTGCACAAAAGGTAGATGTTGCTCTGCCTGCTTGCACTGCTTACTACAGACAGAGTTGCTCAAATTTCGGTTGTTACTACCTGTTTCTTTCTCATTTTGGTCAATTGTAATCTACATCGCCTATATGTCATGCCAGAGATCACTGTCTGTGAATTAAAACGATTAAGAAAAAAAATGTTCAATCAATATTTTATTGCAGTGTTCAAAAGTAAAACAGTTTAAAGGTCATATTTTTTTGCAGATGTTCGTCTTTAAATGTGTTGGTATAGATATAGTTTTTTTAATTTTAAATTTGATTTACAATCCTTTTATTGCTTCAAATTTGTAGTATTGCTGTAACATCCTAAATGGAAAACAAGGGTGCGGATTACATGGGGGTTTGGGGGGATTGACCCCCCTACTACCGCTTGATTCCCCCCTGAAGGCA
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
Control on top; Mutant below; 5 dpf
Control on top; Mutant below; 5 dpf
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 eye
ZFA:0000107		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 gut
ZFA:0000112		 quality
PATO:0000001		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 head
ZFA:0001114		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 inner ear
ZFA:0000217		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 melanocyte
ZFA:0009091		 quality
PATO:0000001		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 pericardium
ZFA:0000054		 edematous
PATO:0001450		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 swim bladder
ZFA:0000076		 aplastic
PATO:0001483		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 yolk
ZFA:0000084		 increased size
PATO:0000586		 abnormal
PATO:0000460

Mutation Details

Allele Name:
sa8598
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 5156 5553 93 102
ENSDART00000020923 Nonsense 5140 5539 92 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23865043)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23983844
GRCz11 20 23882944
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGATGARGAAGATGAYATYGCGATGGAAGTGGARGAAGAGAAGGAYCTA[C/T]AAGCAGTTGAAGCCCAGGAGCTTAAACCAGAGAAGCTAAATGACAATAAG
Long Flanking Sequence:
TCTCCTCTACCAGAGCTTCAAACGCAAACCTGGGCAGGCAGATAATGAGCGCTCAATGGGTGATTATAATGAGCGTGTGAATAAGCGTTTGCGAACCGTTGACAAAACAGAGCAGAAAACACAGGATCAGACGCAGCCTGATACACAACAGGAGTCTGACCTGTACGAGCACATTAAGCAGGGAGACGAGAGATATGATGCTCAGACATATGGTAAGAAGATGCACAATAATATATATTTTTATACACACAAAATTATATATTTTAAAAAAACATTGAGTCATGAGTGAGGCAGATTTGAGTCTGACCTAAAAAGTCTTTTATACATATAAAACAAACAATGAAATAAAGGAAAAAAGAAACCACCCGAGTAATATTTTTGGACATGTATTTTTCAAAGATGTTGCGAGTAAGGAGCAGCAAAAGCCGACTGGTGTAAAACAGGAAGAAGAAGATGAGGAAGATGACATTGCGATGGAAGTGGAGGAAGAGAAGGACCTA[C/T]AAGCAGTTGAAGCCCAGGAGCTTAAACCAGAGAAGCTAAATGACAATAAGGCTTCTCAAAAAGGTGCAGTACAATGTAATGGTTTGGTGAACAAACTGTCTTGAAATACTTAATTATGATCACATTTTTCCTAAGTATAAAAAACTTTTCAAAAGTAGCAAAACACTAAGCTTGTTGTTATAAAATGCCTAGTGAGTTTTTATGCATTCATCAATTGAAACAGCTAAGATTAAAAGATTGATTTTTGGAGTGAATTTAAAAGATGGTGTATAAAACTGTATAGTTGTTTAGTGTGATAGTGTGTACTGCTACATGCCTAAAGTGTATACACACAAAAGTATCCTGTGCGTCCAAATTTAAGATTCATCTTTAACCTTGATCTGTTGTCTCTCAGGTCTGGACTGTGGAGATTTGGAGGCACAGAAACAGGCCATTGAGGAAGAGATGGAGAAGCTGGAGACACAGAGGAGCATTAATGAAGAAGAGATGAAAGAGAGGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23693
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Essential Splice Site 5267 5553 None 102
ENSDART00000020923 Essential Splice Site 5247 5539 None 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23863658)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23982459
GRCz11 20 23881559
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGCTTAAATGTGTGTGTATTTATTTGTGTGTTTTGCTGTTGTCCCTC[A/C]GGAGAGTGCTGCTGCAGCGTTGTGGCATCAGTACCAGACCCTGACATCTC
Long Flanking Sequence:
CATTAAGTAACATTAACTAATGAACCTTATTGTAAAGTGTGACCTAAAAATGAATTTCATCTAGAACATTAGATCAAAATAACAAATTATTTGTAATTTTACAGAACTGCTTTTAATTACTTTTGAACTTCTATTAATCAAAGAATCCTTCAGATCGATAAAATATAAAAATAATAATATTTATATAATTGTTTAGCAAATCTTAGTGATTTCTGAAGGACTGTGTCTCACCAAAGACAAGTGAAATTCATCTTATTTCAGAAAATTATTATTTTTACTGCATCTAAACTGAGCAGCACTTCTGTTTGTTTTATCAGGCAACTCTGATGAACCCAGAGGAGCTGAGAAGAGAGATGGAGCTGCAGTTAGAGGCCTGGCAGAGACAGACTTTAGGATCACATGAAGAGGTGAAGCCACATGACTAAGCAGATTTTCCTCACCTAGCAAATCTGTTGCTTAAATGTGTGTGTATTTATTTGTGTGTTTTGCTGTTGTCCCTC[A/C]GGAGAGTGCTGCTGCAGCGTTGTGGCATCAGTACCAGACCCTGACATCTCCACTGTCCCAGCAGCTCTGTGAGCAGCTCCGACTTGTCCTGGAGCCAACACAGGCTGCCAAACTCAGGTTGGTCTTTCTACCTTTCCGTTACAAATTAAAGGATTTCCCTACAAGCCAAAGGAATTATTATTTAAAGGTATAGTTCACTCCAACATGTGAACATTTCATCATTCTAAAATTTACTCGGACTGCACTTGTTCCAAACTTGTTTCATTTTGTTTCTTTTTGAGCCTAAAGAAACATATTCAGAAGCATGTTGACAAATGATAGCCATTGACTTTTTTTTCCCTATTATAGATGTATTATAGAAAATGGCTAGCAATTTTCAACATTCTTCAGAATATCTCATTTTGGGCTCAACAGAAAAAAAGAAACTCATAAAGGTTTTGAACTAATAAAGAAATGTTCATTTTTGAGTGAGCTACCCCTGTAAAAATGCTATATGTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6631
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004209 Nonsense 5333 5553 97 102
ENSDART00000020923 Nonsense 5313 5539 96 101
ENSDART00000142323 None None 2210 None 43

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 23862978)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23981779
GRCz11 20 23880879
KASP Assay ID:
554-4560.1 (used for ordering genotyping assays)
KASP Sequence:
GCGGAAAGTTATTCCCTACATTGCCAGTCAGTTCCGCAAGGATAAGATCT[G/A]GCTGAGGAGAACAAAACCCAGCAAGAGGAAYTACCAGATCTGCCTGGCTG
Long Flanking Sequence:
ATTTAAAGGTATAGTTCACTCCAACATGTGAACATTTCATCATTCTAAAATTTACTCGGACTGCACTTGTTCCAAACTTGTTTCATTTTGTTTCTTTTTGAGCCTAAAGAAACATATTCAGAAGCATGTTGACAAATGATAGCCATTGACTTTTTTTTCCCTATTATAGATGTATTATAGAAAATGGCTAGCAATTTTCAACATTCTTCAGAATATCTCATTTTGGGCTCAACAGAAAAAAAGAAACTCATAAAGGTTTTGAACTAATAAAGAAATGTTCATTTTTGAGTGAGCTACCCCTGTAAAAATGCTATATGTTATTGTTCAGATTTATAAGTTCAGGCCCGGAAAACGTGGATCCTACACTTTCAGTCATTTTTACCCAGTTTTTATCAATGTTGATTGCTTTTTAAACAGGGGAGACTTCCGCACAGGCAAACGGCTCAACATGCGGAAAGTTATTCCCTACATTGCCAGTCAGTTCCGCAAGGATAAGATCT[G/A]GCTGAGGAGAACAAAACCCAGCAAGAGGAACTACCAGATCTGCCTGGCTGTGGACGACTCCTCCAGTATGGTGGACAACCACACCAAACAGGTACAGTCTTCCTAAAGCATTTCAGATATTAATTATAACCGACTAAATCAAAATGCAGTTAAAGAATCAGTCAAATTATACTCTGCATACAAGTCTAGGGAGGCTGAGAGGGTTTGTATCTAGAAGATGTGATCATGATAATCTATAATTCATGGACTTGACTTCATTCATTCATGCACTTCGCTCACTCCCTGGACACTTATGGATATTTATGCATAATTTGCCAGGTCATATATTGTGTGCTCCAAGAGTGGACTTCACAAACAAGAATACACTCTTTCCTCTTTATGCACCAGACACTTTATTAGAAACACAATGTTTTCACTGTTTGTTTGTATAGCTAAGATTTGTTTAAATGTTAGGTTTTTGTATCTTGTTAGATTTTCTATAGCTTCAGTTTCAAATATTT
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 eye
ZFA:0000107		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 gut
ZFA:0000112		 quality
PATO:0000001		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 head
ZFA:0001114		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 inner ear
ZFA:0000217		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 melanocyte
ZFA:0009091		 quality
PATO:0000001		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 pericardium
ZFA:0000054		 edematous
PATO:0001450		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 swim bladder
ZFA:0000076		 aplastic
PATO:0001483		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 decreased size
PATO:0000587		 abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037		 yolk
ZFA:0000084		 increased size
PATO:0000586		 abnormal
PATO:0000460