ZMP
pkhd1l1
Ensembl ID:
ZFIN ID:
Description:
polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:RefSeq peptide;Acc:NP_
Human Orthologue:
PKHD1L1
Human Description:
polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:HGNC Symbol;Acc:20313]
Mouse Orthologue:
Pkhd1l1
Mouse Description:
polycystic kidney and hepatic disease 1-like 1 Gene [Source:MGI Symbol;Acc:MGI:2183153]
Alleles
There are 20 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18556 | Essential Splice Site | Available for shipment | Available now |
sa987 | Nonsense | Available for shipment | Available now |
sa23516 | Nonsense | Available for shipment | Available now |
sa15541 | Nonsense | Available for shipment | Available now |
sa23517 | Nonsense | Available for shipment | Available now |
sa17557 | Nonsense | Available for shipment | Available now |
sa32243 | Essential Splice Site | Available for shipment | Available now |
sa15346 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18556
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Essential Splice Site | 504 | 4196 | None | 77 |
ENSDART00000130472 | None | None | 3172 | None | 48 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 23348269)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23277684 |
GRCz11 | 19 | 22862007 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAGAAACAGCAGATCAACGCATACTACTCTATACTACCTGAAAAAYAGG[T/C]AAGTGAACTCACTTTAGGCAGAGTTCAAAGATTATCTAAAGATAAGATGG
Long Flanking Sequence:
GTTTAGGGGCGGGGTGTGGTGCCACGCCTCCTTTTTAAGATAATACATTTTCGTATGTTCAAATTTGTACAAATTAGCTACTAAATTGACAAAATGTAATATAGTTACATTTCCTTGTGAGATAAGACTGGCTATTCCGACGTGTGTTCTCAGAAAACAGTACAGTGTTTAAACCAAGACATTAACTGCAGTGCCATGTGATCGATAAAACAAATTGCAAATTTACAAACATACTGAAGACAATGGAGTTTTTCTTGTTAAAATAAACATAAAAGGTCTTGTTTTCTCCAATCTTGGATCTAAACATTTTCTCTGTATAATTCTTTCAATGTGCTGCAGGTACTACATCGAAGTTCTAATGCAGGAATATGCAGTAGTAGCATCAGTAGATGTGGGCTTTTTCAAAGAGGTCAGCCCTTTCACGGCCCAGCAGACAATAGAGTCTGTTAATGAGAAACAGCAGATCAACGCATACTACTCTATACTACCTGAAAAACAGG[T/C]AAGTGAACTCACTTTAGGCAGAGTTCAAAGATTATCTAAAGATAAGATGGAAGGAAGCCTTAGAAAAATCTGCAAACTTAATAGGAGAAAAGTTTTTCTGTCTGTACTGTATGTGTGTGTGTGTTTTAAACTCTATTAATACTGCTTTAGGTGATACGTTTTGATGGATGGACACCAGTAACTGCTGTGAATGAGGTTCAAACTTTAAGAATCAGCAGTGACTGTTTTTCTCAGGGCACATGTGAAAACACATACTACTCACTAGGATATGGAAATCTTACAACAGGTGTAATACAATACAATGGTTCTAAGAATGTGTTTAAAGGAGCCAAATATTCGTTTTTTAATTCACTTCTAAATTTTTACATGTTTGTGATACTTTTATTTGCATGTGTTGTAATGTTTACTGTAATTAATTACTGTGCGTGTTGTAGGACCGATCCCTGTCAGTGCTTCAGCAATGGATTTGCAGAATGCTCTGAATGACTTGTGGACGATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa987
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 678 | 4196 | 19 | 77 |
ENSDART00000130472 | None | None | 3172 | None | 48 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 23349482)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23278897 |
GRCz11 | 19 | 22863220 |
KASP Assay ID:
554-0891.1 (used for ordering genotyping assays)
KASP Sequence:
AATGTCCAGCAGAGATTCCAACCGCTGAGAACAGTAACGTGAAATTTTTC[A/T]GAGATTATGAGATGACCACCACAGGGGTAAGCTGCAAATGCACATGATCA
Long Flanking Sequence:
AAACATGTATAATAATATTTAAAGATGATATTTTTTATTTTGCGTATGAATTTAATTTTAAATTAAGTAAAAACTGAGTAATTTGCCAAATCAAAAAATATGTTTTATAACATTTTGAAAATGATCTCAGGTGACTTTGAGGATTTCGATTACATGATAATGGACTTAGATACGAACATCACAGTGACTGAAGCTGTGAAAGGGAAGGCCAGCATGGAGACATTTACGCTGCTGTGGGCAGAAGTTCCATCCCTCCCTCTGCCTTTCAATGCTTCTGAAACTGAGGTTCACCTTTGCTTTATATCTCTTAAAATTGACCATAGAATGTGTACCAAACTTTTACAACTTTTCTTTAAATGTTTCATACCTATATGATGGGTTTCATCTGTGTTTATTTTGTTTTTTATCAAATAAAGGTGCGTTCAGCACTAGATTTGATGATCACAGCTAAATGTCCAGCAGAGATTCCAACCGCTGAGAACAGTAACGTGAAATTTTTC[A/T]GAGATTATGAGATGACCACCACAGGGGTAAGCTGCAAATGCACATGATCATACGGTACATGTTTTACATGCTGAGCACTATTTAGTGAAGTTTATTCATAAACTAATTTCGAGAGGAGCACGTGATTATGATTGAACACGGCTGGTTCTGCATTAGCATGCTTGATCCACCAATCAGGCCATTCCTAACCACTATAAAGAGCCAGGGTTTTCTCACTACAGTTATCTTCGATTTGAAGAATCCCCCCTTCCACCCCTACCTTTTCACCTTTCCCTCCATAGGGCAGCACGGTGGCTCAGTGACTAGCACTGTCGCCTCACAGCAAGAACGTCACCGGTTCTAGTTCCTTAACAGGCCGGTGGTCGTTTCTGTGTGTAGTTTGCATGTTCTTCCCGTGCTTGCGTGGGTTTTCCCCGGGTTCTCCGGTTTCCTCCCACATTCCAAAAACATGTACAACAAGTTAATCGTTAAATCTAAATTTCAATACAGGTAATCTAATA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa23516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 2124 | 4196 | 42 | 77 |
ENSDART00000130472 | Nonsense | 1059 | 3172 | 15 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23379411)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23308826 |
GRCz11 | 19 | 22893149 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATCATCTGTGTGACCAATGCTGGGCCCAAATCTCAAGAAACTCAAGTG[C/T]GAGTTCAATTGGGGAACAGAGGAATTGCCAGAATGGTAATGTAAAATGTA
Long Flanking Sequence:
TGTGTTGTAGTCAATCAAGTAACCTGTCGAAGAAGGAGAAATGGATGTAAAACACCCTATCAAAAATTTTACATGTGGACTGTTATGTCAATCCTACATACTGCTCCTTTAATTGATAAACTATCTCATCAATAGCACCAAGAGTTGATCAAAATTTCAGAAACGCTATTAGCTAAAAGTGAACACTGGGCAGGTGATGTTAAGTTTTGAAAAAACAAAAAGTACCATCTAAATACTGTACAACCAAAAGTATTACAATTTGTACACTATGTCCCAAGTCTTTAAAGCCCAATTGGGGTAAACAAACATTAACCAAATGGTTTGAAACTAATCTGAATTTTTGAGTTTCCGGCATTTCTCTTTTCTGTTTTATTTATAGCTCAAATATCAGTGAAATTGCAGTCACAATCGCAGGCTCTATCTGTGATATCCAGTCTGCCAATGAAACTCAGATCATCTGTGTGACCAATGCTGGGCCCAAATCTCAAGAAACTCAAGTG[C/T]GAGTTCAATTGGGGAACAGAGGAATTGCCAGAATGGTAATGTAAAATGTAAATTCATTTATGTAAATGATATAATAATTGTCAATGTTTAGCTATTTCATTTATCTGTTCTCTTTTAACAACTTCTTACTGTTGGCCTGTTTTGATCAGCTAGATTAGTCTATTGCTGAACAGGGGTGCATTTCCGAATACCATCGCTAGCCAACTAAAGTCGCAAGTCCCTTCATTATAAAAAAATCTGTTGATTTGTCGTTTCCGAAATCCATCGTTCCAACGAACATTGCAACTACACTTCTGGAGTTGTAGTTTGAAACAAAGTGGCTGTGTTCTATTCCCAGTTATTCTCCCTATGCCCTATTCGTTTAGAACATTCTAACATTTAAACTTGGAATTATCCAAAGGAAAAAAAAAAGCATTAAAGTCATCACTCTTAGGTATAATTTGCTTTCAAAGTATTTTTACAGTTCAGTTTTAGCGATCTCCATGTTTACAATTATGCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 2146 | 4196 | 43 | 77 |
ENSDART00000130472 | Nonsense | 1081 | 3172 | 16 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23381079)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23310494 |
GRCz11 | 19 | 22894817 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTCAATGTATGTCTCAGGATAATGCTTCCTTCTTCTACATTGACGTCTG[G/A]TCATCTCCCTACACATGGGGTGGTCTCTCTCCTCCTGAGGAGGGATCGTT
Long Flanking Sequence:
CACAAAGAAATGATGGGGTTCTTCTCTAAAGAAGTTGTTACTCCACCCCGTTTAGAACATCATTATGGTCATTTTACATTATAACTAACGTGGCAGAGAAACTACGAGTTTTAGGAAACACTCGTCACTACATCAATCTTTTCCCAAACAATGTATCGTACTATAGTTTAGCCCCAAGTTATGTCGATGTTTGAGGAATGCGCCTAGAGCATCTTCTTGATATGTCGACAGCATAAACTCTGCAATTAAGCAAATGTGTTATACATCATCAGGTTTGTGCAGGAAGTAAAACTGAAATGACTCTCTGACACTTACAGAGAGTTCAGAATTAGTTCTTTTTAATATGCACTTTGTTCCTTCTAATTCAGATCCTTTATACTACAGTAACACACAAATGTTTGTCTCAATATCTAAAAAAGAATAACAGAGGCATTTATTGTCTCTTCTTTTGCTCAATGTATGTCTCAGGATAATGCTTCCTTCTTCTACATTGACGTCTG[G/A]TCATCTCCCTACACATGGGGTGGTCTCTCTCCTCCTGAGGAGGGATCGTTTGCTGTAATCACTGCTGGTCAGACCATTCTTCTTGACACAAGCACTCCAATCCTTAAGATGCTGCTTATCCAAGGTATTCTTATTTAAACATGTGCAACTTTTATTAATTAAAGCCTTGGTGCACACATACAGTACTATACAGTACTCTAAATGTTTCTGTTTAGGTGGCCGACTGATATTTGATGAGGCAGACATTGAGCTGCAGGCGGAGAATATTCTGATCACAGATGGCGGAGCTCTGCAAATCGGAACAGAGCAGATGCCCTTCCAGCACAAGGCCATCATCACCCTGCATGGACACCTGCGCTCTCAAGAGCTTCCTGTCTATGGCACCAAAACACTGGGAGTCCGACAGGGCGTGTTGGATCTGCATGGTATGCAAATTAACATCATTTCTAAAGGGACTACTAGTTGACTCTCTAAAAAGTATTTGCTCGTTTTCAAAAAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23517
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 3134 | 4196 | 56 | 77 |
ENSDART00000130472 | Nonsense | 2081 | 3172 | 29 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23393534)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23322949 |
GRCz11 | 19 | 22907272 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGGTGTGTTTGGATCTCTTGACCTGTATGGCATGCCACACAACATCTA[T/A]CACACTAAGCTGGCAAGCACATCCCAGGCAGGAAACAACACTCTCTCTCT
Long Flanking Sequence:
AAATAAACGAACAAACAAACTGTAAATTGTTTTTTTTAAGCGTTAAACTTATTTTATTTGAGTAATTTGTTTCTATTTGCATTTAAATTTGAAAATGGATTTGTCTTCTCTTTTAATTTTGTTCTTTCATGTTATTATTGCACACTTTTTTTCTATTATTGCCCATGTATGTCGATCAGTAGTACCCTTTATAATCCTTCATTCTGAAAGGCGATTCGAAGTGGCCCTTCAGAGGGTGAAATCCCATTTTGAATGGACCATCAATGTCATAAAGAGTTAATAAAGATCATAATGCAAATAGAGTGAAAGTTTAGCTGCATTAGTGTTGACTGATGCATTTGAGCTTAGTTTATCTTTTAGTGCATTGAAGACACCAGACAGTCATGCAAACAATGGTAAAATACATTCTCCACAGTCTTTAAAGGTTCTAATTTTAACAGTCACTGTTTTCCAGGTGTGTTTGGATCTCTTGACCTGTATGGCATGCCACACAACATCTA[T/A]CACACTAAGCTGGCAAGCACATCCCAGGCAGGAAACAACACTCTCTCTCTACAGGAGTCTGTGGACTGGAAGGTCAGACGCTTTTTAATGGTGCTACCAAAAGGAGTTTAAAGAAGAATTTCATGATGTGTGATGCCATTAAGAGTCAAATCTCCTTTCATGAACTAAACTGCTTTTATTATCTTCAGGTTGGGGATAAGATCCTGCTGTCCACCACTAGCTATGACCCTTGGCAGACAGAAATACGCAACATTATTGCTGTTTCCAATTATGGTCGCACACTGACCCTGGACCAGCCTTTAACATATACACACATTGGTTAGTTTTCTACAGTAGTGTTTCCCAACTGAACGGTTTCACTTTCTCACAATTTTAGTTGTCAGAATCCAGTTTCTTTCTTCTGTTGAACACAAAATAAGTTATTTTGAAGATGGTAGTCATTGTCTTCCAAAATATTATTTTTTCCTACTATGGATGTCAGTGGTTGCTTTTCGAGTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17557
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 3356 | 4196 | 61 | 77 |
ENSDART00000130472 | Nonsense | 2303 | 3172 | 34 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23396849)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23326264 |
GRCz11 | 19 | 22910587 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGGGGAGAYAGWAATGTGGTTCGKAGGAACTTGGTTACTTTGACACTGT[G/A]GCCYGGATCTTACAATGGCAGAGCAGAGGAATTTAACTTTCAATGGAATG
Long Flanking Sequence:
AGTGATAAAGCTTCACTCCCCATCTCTAAGGGTGCGCCCTTCAACCCTTTGAAAGAAGCTCATATTAGTAACTTGTGGTTGAGATCTTGCCCTTTTGGTAATGACCCAAAGTTCATGACCATTGGTGAGAATCGAGTGTTTTGCCTTTCATTCTTCCTCTATCTCCCTCTCCCATTGTGTTTAAATCTATGAAAGTAAATATCTTCCCAAGTTTGTTTTAGAGTTGTTTTATTATTTTAATTGTTCAGTTCCTCAGACATTGGCTACTAATTTATCCTCACTAGTAATACTACAGTTGTGTGAGTGCAGGAGGAATGTTCTGACAGGATGAACATGTGTGGAAATAGGCCTGCCACCACACCTAGAAAGAAAAACACTTTTACAGTATAAAACCACATGTAATCCCTCATCAAATTACTATTTTTATTTTAATTTCCAAGGAATCAGAGTCTGGGGAGATAGTAATGTGGTTCGGAGGAACTTGGTTACTTTGACACTGT[G/A]GCCTGGATCTTACAATGGCAGAGCAGAGGAATTTAACTTTCAATGGAATGCAGGAATTGAGGTACTACATACAGAATAAAGTCAGATGGGAATATCATGTTACTGTGCTTGAATGTGCTATTTAATGGCTACCATTTTCATATACTGTGTGTAATGGTACATGAAGCACTAATGCATGAATTACCATGTTACCATGTTGAAAATCATGGTAGACCCACTTTTAGAACTGCATATTTGCTTAAAAGATTAATACTATAAAAATATAATGTTGTGTGCCCTAGGTCAGTGAAGCAACCAATGTGATTCTTCAAGGAAATATTGTTGCTGGCTATGAACGAGTGGGATTCAGAATTGATGGAGAACCCTGCCCAGGTACAATATATGAAGCAAAAGTAATTTTAAAAAATAAACACAAACATACACACAAAATAAAGATTTCAACAATATGTCAAAAGGAGTTTCAAATCCAGTGGCCCAGTGGAGTCAGAATGAGGCGCATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32243
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Essential Splice Site | 3497 | 4196 | 64 | 77 |
ENSDART00000130472 | Essential Splice Site | 2444 | 3172 | 37 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23397714)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23327129 |
GRCz11 | 19 | 22911452 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTCCCGCGGTCAGTCACAGGTATTCTGACAAAACCGTTCGCGTGCAGG[T/C]GAGAATGCACTACAGTATAAACTGTGCACACTATACAGAAGTGGCCAAAA
Long Flanking Sequence:
CTGCCCAGGTACAATATATGAAGCAAAAGTAATTTTAAAAAATAAACACAAACATACACACAAAATAAAGATTTCAACAATATGTCAAAAGGAGTTTCAAATCCAGTGGCCCAGTGGAGTCAGAATGAGGCGCATGGTGGTCTTTTCGGGCTCTACATGAATAAAGATGGACTTCCTGGTTGCTCTCAGATCCAGGGCTTCACTGTCTGGAGAAGTTTTGATTTCGGCATTTATGTTCAAGTATGAAAAATGATTCATGCACATCCTGCTATTATATAATACCCATGTGTTCTCTTGGTCAAAATGTCCTAGTTCTACAAATGCATTGTGCCGATCGATCTAGCATTGTTTTAAATGACTGTTTTCTCACTTGCAGGTCTCCATGAGTGTGTTGATTTCTAATGTGAGCCTGATTGATAATGGAATGGGAATCATGTCTTTAATTTATGAACCTCCCGCGGTCAGTCACAGGTATTCTGACAAAACCGTTCGCGTGCAGG[T/C]GAGAATGCACTACAGTATAAACTGTGCACACTATACAGAAGTGGCCAAAATTAATAGAACGCTCGTTAGATCTGAAAACACTTGTTGCTCTGAGCACAACAACTATAAAATAAAGTGAGTCATATTGTTTAATTCACTTTTTACTTACCTACTATTTTGTATGTCCAGCAATTACAGGACATCTCTTTGGCACATTGTTATTTTTTTCCTCAGAACTTCAATAGTAATATGTTATTACTATTAAAGTTCTGATGTTATGTCTTATACTATAAGTCTCATAGTATATGTTAGTTATGCACCGGTTTTTAAAATAGCTCCTATGTCCACTGTTGTGTTTGTAGTCATGAATAATTTATGTAGCACTGCAACACGGTGGAACAGTTGGTAGTGCTGTCGCCTCACAGCAAAAGGTTGCTGGTTCGAGCCTCGGCTGGGTCAGTTGGCATTTCTTTGTGGAGTTTGCATGTTCTCCCCACGTTTGCGTGGGTTTCCTCCAGGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15346
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127517 | Nonsense | 4023 | 4196 | 73 | 77 |
ENSDART00000130472 | Nonsense | 2970 | 3172 | 46 | 48 |
Genomic Location (Zv9):
Chromosome 19 (position 23401807)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 23331222 |
GRCz11 | 19 | 22915545 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCATCCATGGGTATCATTCCTCCTCCACCCTCATCCASTGACCCAGCCT[G/A]GAATAATGTAAGAYGTTAATCYACTTGTTTTATTTGAACAATATATAKCC
Long Flanking Sequence:
TACAAATCCGCACCTCCCCAGTTCTGTTTGTGGCCTTCAACCTCCCGGCTATGACTGAGGCGGAATTCTTTGGCGCAAATTTAATCAACAATCTTGCTGCATTCCTAAAAATTCCTTCGTACAAAATCCGAATCACCAACATAATCCGTGAAGGAACTAATGCTAGACGACGGCGCTCGACAGGACTGACAGTGGAGGTGGAGATCAGGGAGCCGCCGACTCAGACGACCACCAACAGCACCACAGGTGACAACAGACAGCTATATTGCATTTAAACAAAAAATGATTAATACACAACAGCATTTAAATCACATCATATTGACCGAAATTGTATATTAATATTCTTTCTTTAGATAACACCCAACAGTTTGATGTCCTGAAGAACATTGCTGATGATCTGGGCCGTGCTGCTGTATCCGGAAATCTGAGTCAGTCCATCGGCTTCAATGTGTCATCCATGGGTATCATTCCTCCTCCACCCTCATCCAGTGACCCAGCCT[G/A]GAATAATGTAAGACGTTAATCTACTTGTTTTATTTGAACAATATATATCCTTAGGGTATCTTAGTGTTTTATATACATGTACACTTCAAATAAGAGTCAAATATGTAGAAATGCAATAGTTTGGATAAAAGAATGAAACATTTAAAATGTAATTTGTAAAATGAACCCAATGGTTTGGTTTGTCCATATATCTTCAGTAATATACCTCATATAGACATCTGTGTTTAATATGTTATATATAAATAAAAGCAAAATAAAAATAAATAAAAATAAAAGCAAAAGCTTGTAAACATAATTTAATGCAGAAACTACAAACATTAAGCACGGGTCACATTATCAAAGAAGGTGAGATGAATCAGGGAACAATCATAACACAACATAACTGATACACTCTAAAAATACTGGGTTGTTGTTACCCAGCGTTGGATCGAATATGGACACATGCATCCACTGGGTTAAAAAGTTTAATTTATATGTTATTGAAAAAAAGTTAACTCAAT
Associated Phenotype:
Not determined