ZMP
si:dkey-222h21.10
Ensembl ID:
ZFIN ID:
Description:
Novel NACHT domain containing protein [Source:UniProtKB/TrEMBL;Acc:B8JIK0]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19627 | Nonsense | Available for shipment | Available now |
sa1161 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa19627
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000138007 | Nonsense | 908 | 976 | 7 | 8 |
ENSDART00000138467 | None | None | 361 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 58923436)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 57501384 |
GRCz11 | 1 | 58237066 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGAATCAACAGGAAAGGAGGGAGTGACTCTTGGTTTGGGTACAATGAT[A/T]AATCCTGGAGCATGTACTGCACTGATGACAGATTCACAGTCTGGCATAAT
Long Flanking Sequence:
GATAATTTAACTGCTTCCTATCAGAAATCTGCATTTGCCTCCTGTTTTTACTGTTTGAATGCTTCACGTTTAGCAGATGTGGTTCATATCTGTGTCTTTCTAGTTTGGATCATGGAGGACATTTAAGAATCATACGAGGACTAAGAAAATGTAGGTGTTTTCTCCTTTAGACACACGGATCTAAAATAATCCTTCGTGTAAAGTTGATCTTATTTTTATTCTTGTGTTCAGATGCTGTTTTTCTCACTCTGGATCCAAACACAGCACACAATCAACTCATCCTGTCTGAGGGAAACAGAAAGGCAAAATTTGAGAAAGAGCATCAGCCGTATCCTGATCATCCTGACAGATTTGAGCACCATGAGCAGGTTCTGTGTAAAGAGACTCTGACTGGACGCTGTTACTGGGAGGCTGAATGGAGCAGTTGGTCTTATATAGCAGTCACCTATAGAGGAATCAACAGGAAAGGAGGGAGTGACTCTTGGTTTGGGTACAATGAT[A/T]AATCCTGGAGCATGTACTGCACTGATGACAGATTCACAGTCTGGCATAATAATAACAAAACTGACATCCCAGCTCCTTTATCCAAGTTAAAAAGATTAGGAGTGTATGTCGACGTTCCATCCGGCTCTTTGTCCTTCTACAGTGTCTCTGACACACACACACTCACACTCATACACACACTCAACACCACATTCACTGAACCCCTCTATGCTGGATTCAGAGTGTTTGAAACGACATTGACTCTGTGTCAGATTTAACAACAACACGATACACAATGATACATTGACAGAGCATCACAAAATAACATGCTGAAAACACCTGCCGTGAAGCTAAAGGAAAATTTGCCTAATACTAATTTCTCGGTTTGCAGGTCAAAAAGGCAATGCAGTTAACCCCATTCACTCATAGCTATATTTTTATATTTTTTTAAATATTTTTAAATCATCCTGAAATGACTTTGATTTGTTTTGACTGTTAGTAGCGAAGTGTTAGCCTTTGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1161
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000138007 | Nonsense | 951 | 976 | 7 | 8 |
ENSDART00000138467 | None | None | 361 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 58923566)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 57501514 |
GRCz11 | 1 | 58237196 |
KASP Assay ID:
554-1071.1 (used for ordering genotyping assays)
KASP Sequence:
ATCCAAGTTAAAAAGATTAGGAGTGTATGTCGACGTTCCATCCGGCTCTT[T/A]GTCCTTCTACAGTGTCTCTGACACACACACACTCACACTCATACACACAC
Long Flanking Sequence:
CATACGAGGACTAAGAAAATGTAGGTGTTTTCTCCTTTAGACACACGGATCTAAAATAATCCTTCGTGTAAAGTTGATCTTATTTTTATTCTTGTGTTCAGATGCTGTTTTTCTCACTCTGGATCCAAACACAGCACACAATCAACTCATCCTGTCTGAGGGAAACAGAAAGGCAAAATTTGAGAAAGAGCATCAGCCGTATCCTGATCATCCTGACAGATTTGAGCACCATGAGCAGGTTCTGTGTAAAGAGACTCTGACTGGACGCTGTTACTGGGAGGCTGAATGGAGCAGTTGGTCTTATATAGCAGTCACCTATAGAGGAATCAACAGGAAAGGAGGGAGTGACTCTTGGTTTGGGTACAATGATAAATCCTGGAGCATGTACTGCACTGATGACAGATTCACAGTCTGGCATAATAATAACAAAACTGACATCCCAGCTCCTTTATCCAAGTTAAAAAGATTAGGAGTGTATGTCGACGTTCCATCCGGCTCTT[T/A]GTCCTTCTACAGTGTCTCTGACACACACACACTCACACTCATACACACACTCAACACCACATTCACTGAACCCCTCTATGCTGGATTCAGAGTGTTTGAAACGACATTGACTCTGTGTCAGATTTAACAACAACACGATACACAATGATACATTGACAGAGCATCACAAAATAACATGCTGAAAACACCTGCCGTGAAGCTAAAGGAAAATTTGCCTAATACTAATTTCTCGGTTTGCAGGTCAAAAAGGCAATGCAGTTAACCCCATTCACTCATAGCTATATTTTTATATTTTTTTAAATATTTTTAAATCATCCTGAAATGACTTTGATTTGTTTTGACTGTTAGTAGCGAAGTGTTAGCCTTTGTTATAAGCTAGTGTGATAGAAGATATTAGCATTAAGATCTTGCATTTTCTCACTTTAGTAAGACGTAATCTGCATGTAAACTGTAGTTTCTCATCAAATCTTCTGACCAAGCAAATGTTCTCTAGTATCTGG
Associated Phenotype:
Not determined