ZMP
si:ch211-198e13.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate SET binding protein 1 (SETBP1) [Source:UniProtKB/TrEMBL;Acc:B0R1
Human Orthologue:
SETBP1
Human Description:
SET binding protein 1 [Source:HGNC Symbol;Acc:15573]
Mouse Orthologue:
Setbp1
Mouse Description:
SET binding protein 1 Gene [Source:MGI Symbol;Acc:MGI:1933199]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa8440 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa8440
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000143276 | Nonsense | 1186 | 1438 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 5 (position 54942882)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51477965 |
| GRCz11 | 5 | 52124558 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACTCTCTCGTCATTATCCTTATCTGACTCTCAGCATTGCAAACGCACT[C/T]RAGGAGAGACACTGAACAACTTCCTCAACATCTGCACTAGACAACCACAT
Long Flanking Sequence:
ATTACGGTCAGTACCCTTCACCCTTGTACTTATCTCATGCACTTGGACCTACAGCCTCTCCTCTGATGAGGCCACCAGTCCCTCCACCAAAGTTCCACCCTGGTGCGTCCTCCTGTCTCTCTGCTTCTAGCAGACATAGAGTGAAGAATATGCCACATGAGATGTCTTCATCAAGAATGAGCGACTCCCATCACCCTTCAAGCAGCTGTTTGGGAAGTGTCTGTCTCCATAAACGCAAGCACAAACACAAGTACAAACATAAAGAAGATCAGTACATCCAAGAGAGGGAGGACCTTGGCGGGCTATTCAGTGGAACACAGAGTCCTGCCTTCCTCAGCCTCTTGAATGAGAGACTTGAGAAGAACTCCTTGTCCAAACTGAAGGACAAGCAAAGAGGCAAGCACAGCACAGACACTTCACCAAAAGCTTCCAGAAACTACTTTGAAGTAGACACTCTCTCGTCATTATCCTTATCTGACTCTCAGCATTGCAAACGCACT[C/T]GAGGAGAGACACTGAACAACTTCCTCAACATCTGCACTAGACAACCACATGAGCGCCTGCGAGCCAGCCAGGACCAGCCGCTGGACTTGTTCAAGGGGCAGCACTTAGGGGGCGATGATTCTAGCATCCACATCAGGAGGCATAGCTTGGAAGACTTCACAACATACAAAGAAGGAAGTATGGCATCTTTCCAAGGATGTAGTGAAGAGCGGGCTGAACAGATGTACCAGTGCTCCACAGCTGTAGCAGGTAAAAATATATCTGTCTCTGTAAAATGTGAAATATGTGTCTGTGAAATGTATTTAGACAAATGAAAGATCCATGCAAGTTACTGATTCTATTGAACTAGTTTTGCTATAAATGAACATGGTTATAATTTACCTGGGGTTGATTAATTGGATACAAGTGAAATCATGTTCCGTTATTAAGTAGAAAATCTAGAGAATCAAATGTGCTCTCCAAGCACTTTGTATTCCGTTCTCTGTACATCTGGCAAGCAA
Associated Phenotype:
Not determined