ZMP
si:ch73-249k16.4
Ensembl ID:
ZFIN ID:
Human Orthologue:
SCFD2
Human Description:
sec1 family domain containing 2 [Source:HGNC Symbol;Acc:30676]
Mouse Orthologue:
Scfd2
Mouse Description:
Sec1 family domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:2443446]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37019 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37019
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000132916 | Nonsense | 22 | 115 | 1 | 3 |
| ENSDART00000134639 | Nonsense | 22 | 86 | 1 | 2 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 22995048)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 23108435 |
| GRCz11 | 20 | 23007535 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCTGAAGCAGGTGCTAGAGGAGATCTTCCACCCTGACAGACGTGAATG[T/A]CCTGATATAGAGCACATGTCTGGAGGACTCACTGAACTTCTCAAGACTGG
Long Flanking Sequence:
GGGAGGCTTTCATGACCCTTTAAAGACCTACTTTAAATGTCTTTTCTTGGTTGTCACTTAACAATAAGCTCATAGTTTCAGTTGTACTGCTTGTCTCATTGTTATTCTTCTGTCATGTTTTTTATGTAACTTGCAGTTGTGAATATATATACCTCTTGGGGTTCTCTTAAGCCAGGCTTTTTCTTCGAAATGGAGGATTGTGCTTTTTGCATACTAATAGGCCAATCTGAAATCAGCATACGCTGCAGGGTACCTGAGAAGTGTTTGTGAGTGGGAGAACAAGCTTTCCTTCTCAGTATTTTATCATAATTCTTCAAATCTTAGCGTTTATCCAGGAAATCACTGACAAACATACAATAATGTGTGTGCATGTGTGTGTGTGTGTTTTATATGTACATACATTGTACTTATTTATTCATGTCTTGTTTTGTATAGGCAACATACCGGCCATTGCTGAAGCAGGTGCTAGAGGAGATCTTCCACCCTGACAGACGTGAATG[T/A]CCTGATATAGAGCACATGTCTGGAGGACTCACTGAACTTCTCAAGACTGGCTTCAGCATGTTCATGAAGGTAAACACATGCACTTGTGCCCTAATGGTTAGGGAGTTGGAGTTGTAATCGAAAGTTTGCAAGTTCAATTCCAAGTCACCATCTTTGATACCCAGCTAAGTTTCGGGTGTGTGCTCACTGTTTGTGTGCTCTCACTTCTCACTTGTTTGTATGCACTTGGATGGATCAAAAGCAGAGGACGAATTTAAAGTATGGGTTAAAGTTCTTGACAATACTCGATTGACTTCACCTTTAAGTTTCAATCATTTCAAGCAGATAAGTGACTTTATTTCTAGTTTAATTTAAACAGTTTTGTTAAAATGATTAGTTGTGGTAGTCAGATTAAAGCAGGGGTGCACAAAATCGGTCCAGACAAACCGGTGTCCTGCAAAGTGTAGTTCCAACCCCAATCAGACAGACCTGGGCTACCTAATCAAGCTCTTACTAGGCTT
Associated Phenotype:
Not determined