ZMP
cyp27c1
Ensembl ID:
ZFIN ID:
Description:
cytochrome P450, family 27, subfamily C, polypeptide 1 [Source:RefSeq peptide;Acc:NP_001106808]
Human Orthologue:
CYP27C1
Human Description:
cytochrome P450, family 27, subfamily C, polypeptide 1 [Source:HGNC Symbol;Acc:33480]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10938 | Nonsense | Available for shipment | Available now |
| sa14231 | Nonsense | Available for shipment | Available now |
| sa2308 | Nonsense | F2 line generated | Not yet available |
| sa7591 | Missense, Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa33808 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa10938
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081309 | Nonsense | 162 | 468 | 4 | 9 |
| ENSDART00000144335 | Nonsense | 265 | 571 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 6 (position 8151429)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 9339730 |
| GRCz11 | 6 | 9575269 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATATGATGAGTAAAACAWATTTGACTCTTTCTTAGGTGTTGCAACTATTT[T/A]ATACGAGACTCGCCTGGGCTGCTTGGAAAATGAAATTCCCAAGATGAGTC
Long Flanking Sequence:
CCTATTCACTATCATTAATCAGCTCAATTCAGTCAGCACAATGTTGATTCACATTAGATTAAAGACAAAGACACAAAGTTTATCAGAATGTAAACATCTTCAACTTCAGCCATAAAAGTAGTTCAAACTAACAGCACTATCACGGAGGTCTGAATTAGTTTATTCAGCCTAGCAAGGATTTAATTTAATCTGCAGAGCTACAATTACATCAATAGTTCATTCAAAACAATTCGGTTTGAGTTTTTGTGTTCTTATCTCATACACAGATGATATGTTTCGAATATTAGCTTTGTAATTTGCATACTAAATGACTTAACGCTGTTTGAAGTGATTGATTTTTGGAAGTCAACCTACTCAGAATTCAAATAAACATATAGAGCCGATCCAGTGTGCAATTGCATTTATTACTAGGATATCTATATAATATGGTCAGTACATAAATGTTAAGCAATATGATGAGTAAAACATATTTGACTCTTTCTTAGGTGTTGCAACTATTT[T/A]ATACGAGACTCGCCTGGGCTGCTTGGAAAATGAAATTCCCAAGATGAGTCAGGAGTACATTACTGCATTACACCTCATGTTCAGCTCCTTTAAGACCACCATGTACGCTGGTGCCATTCCCAAATGGCTGCGTCCCATCATTCCCAAACCCTGGGAGGAATTCTGCAGCTCATGGGACGGCCTCTTTAAATTCAGTAAGAACAGAAGGACTGTGGTGTGATGGGACATTGTGACAAAGTAGCTTTTTTCCGTTTCATTAAAAGCTTAATGTTTGTTTTAGGTCAAATCCACGTGGACAAGAGGCTTTCCGAGATCAAAAAGCAGATGGAGAAGAGCGAAGAGATTAAAGGAGGGTTGCTGACTCACATGCTGGTCACCAGAGAGATGAATCTAGAGGAGATCTACGCAAACATGACAGAAATGCTCTTGGCTGGGGTGGACACGGTAAGGACTGGGGTGCTGGGAATAAGGGCATTACAAGTCATCGCTTCTCAACTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14231
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081309 | Nonsense | 181 | 468 | 4 | 9 |
| ENSDART00000144335 | Nonsense | 284 | 571 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 6 (position 8151487)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 9339672 |
| GRCz11 | 6 | 9575211 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTCGCCTGGGCTGCTTGGAAAATGAAATTCCCAAGATGAGTCAGGAGTA[C/A]ATYACTGCATTACACCTCHTGTTCAGCTCCTTTAAGACCACCATGTACGC
Long Flanking Sequence:
TTAAAGACAAAGACACAAAGTTTATCAGAATGTAAACATCTTCAACTTCAGCCATAAAAGTAGTTCAAACTAACAGCACTATCACGGAGGTCTGAATTAGTTTATTCAGCCTAGCAAGGATTTAATTTAATCTGCAGAGCTACAATTACATCAATAGTTCATTCAAAACAATTCGGTTTGAGTTTTTGTGTTCTTATCTCATACACAGATGATATGTTTCGAATATTAGCTTTGTAATTTGCATACTAAATGACTTAACGCTGTTTGAAGTGATTGATTTTTGGAAGTCAACCTACTCAGAATTCAAATAAACATATAGAGCCGATCCAGTGTGCAATTGCATTTATTACTAGGATATCTATATAATATGGTCAGTACATAAATGTTAAGCAATATGATGAGTAAAACATATTTGACTCTTTCTTAGGTGTTGCAACTATTTTATACGAGACTCGCCTGGGCTGCTTGGAAAATGAAATTCCCAAGATGAGTCAGGAGTA[C/A]ATTACTGCATTACACCTCATGTTCAGCTCCTTTAAGACCACCATGTACGCTGGTGCCATTCCCAAATGGCTGCGTCCCATCATTCCCAAACCCTGGGAGGAATTCTGCAGCTCATGGGACGGCCTCTTTAAATTCAGTAAGAACAGAAGGACTGTGGTGTGATGGGACATTGTGACAAAGTAGCTTTTTTCCGTTTCATTAAAAGCTTAATGTTTGTTTTAGGTCAAATCCACGTGGACAAGAGGCTTTCCGAGATCAAAAAGCAGATGGAGAAGAGCGAAGAGATTAAAGGAGGGTTGCTGACTCACATGCTGGTCACCAGAGAGATGAATCTAGAGGAGATCTACGCAAACATGACAGAAATGCTCTTGGCTGGGGTGGACACGGTAAGGACTGGGGTGCTGGGAATAAGGGCATTACAAGTCATCGCTTCTCAACTTGTAATCCGTGACTCATAATTTGGCACAAGTTCGCTTTGTTGGCCAGCCAAATTAGTCAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2308
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081309 | Nonsense | 211 | 468 | 4 | 9 |
| ENSDART00000144335 | Nonsense | 314 | 571 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 6 (position 8151575)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 9339584 |
| GRCz11 | 6 | 9575123 |
KASP Assay ID:
554-3010.1 (used for ordering genotyping assays)
KASP Sequence:
CCACCATGTACGCTGGTGCCATTCCCAAATGGCTGCGTCCCATCATTCCC[A/T]AACCCTGGGAGGAATTCTGCAGCTCATGGGACGGCCTCTTTAAATTCAGT
Long Flanking Sequence:
GGTCTGAATTAGTTTATTCAGCCTAGCAAGGATTTAATTTAATCTGCAGAGCTACAATTACATCAATAGTTCATTCAAAACAATTCGGTTTGAGTTTTTGTGTTCTTATCTCATACACAGATGATATGTTTCGAATATTAGCTTTGTAATTTGCATACTAAATGACTTAACGCTGTTTGAAGTGATTGATTTTTGGAAGTCAACCTACTCAGAATTCAAATAAACATATAGAGCCGATCCAGTGTGCAATTGCATTTATTACTAGGATATCTATATAATATGGTCAGTACATAAATGTTAAGCAATATGATGAGTAAAACATATTTGACTCTTTCTTAGGTGTTGCAACTATTTTATACGAGACTCGCCTGGGCTGCTTGGAAAATGAAATTCCCAAGATGAGTCAGGAGTACATTACTGCATTACACCTCATGTTCAGCTCCTTTAAGACCACCATGTACGCTGGTGCCATTCCCAAATGGCTGCGTCCCATCATTCCC[A/T]AACCCTGGGAGGAATTCTGCAGCTCATGGGACGGCCTCTTTAAATTCAGTAAGAACAGAAGGACTGTGGTGTGATGGGACATTGTGACAAAGTAGCTTTTTTCCGTTTCATTAAAAGCTTAATGTTTGTTTTAGGTCAAATCCACGTGGACAAGAGGCTTTCCGAGATCAAAAAGCAGATGGAGAAGAGCGAAGAGATTAAAGGAGGGTTGCTGACTCACATGCTGGTCACCAGAGAGATGAATCTAGAGGAGATCTACGCAAACATGACAGAAATGCTCTTGGCTGGGGTGGACACGGTAAGGACTGGGGTGCTGGGAATAAGGGCATTACAAGTCATCGCTTCTCAACTTGTAATCCGTGACTCATAATTTGGCACAAGTTCGCTTTGTTGGCCAGCCAAATTAGTCAATTTATACGCTGCTGCTCGTACTTCCATTGAAGTATCTCCAAGCAGAAGTGATTTAGGAAGCAGGGGCACATTGTTAATTGAGACATCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7591
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Missense, Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081309 | Missense, Splice Site | 337 | 468 | 7 | 9 |
| ENSDART00000144335 | Missense, Splice Site | 440 | 571 | 7 | 9 |
Genomic Location (Zv9):
Chromosome 6 (position 8154558)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 9336601 |
| GRCz11 | 6 | 9572140 |
KASP Assay ID:
554-4350.1 (used for ordering genotyping assays)
KASP Sequence:
ACTGTTTAAAACAAAACATTATTTAACTTCATCCCTCTACTGCACACAGG[C/T]TTTTYCCTGTTCTCCCTGGAAATGGACGTGTTACACATGATGATCTGATC
Long Flanking Sequence:
AGAGTGGCACTTAGTGTTTTCTCATGGTGTATCTCATGGTGAACTCTTTAATGCAGCTCATGTGGAATGCATGCATTTTCATAAATCGTACATTAAACAACTTGTATATTGAGATCTTTGAATCTCGAAATAAAAGAATATTTTCCAACCTTCTAACAGAGACAGAGAATTTCTTCAGAATTCCTCAACATTTTGATCCCTCTGCTCCTTCACAGACCTCTTTTACGCTGTCGTGGAGCACATACCTTCTGGCGAGGCATCCCACAATACAGCAGCAGATCTTTGAGGAAGTGGACCGAGTGCTGGGTGGTCGAGTCCCAACTGGAGAAGATGTTCCTTATCTGCCGCTTATTAGAGGGCTTGTTAAAGAGACACTCAGGTAAGCTCCGCCCACCATTGTGAAAATAAAATTCATCTTAAATATTGTTATTTAGGTTGAGATACAGGGTGACTGTTTAAAACAAAACATTATTTAACTTCATCCCTCTACTGCACACAGG[C/T]TTTTCCCTGTTCTCCCTGGAAATGGACGTGTTACACATGATGATCTGATCGTTGGAGGTTATCTTATTCCTAAAGGGGTAAGAGCAGCATGTATCATGTAACTGACCATTTCAATGTGGTGATGTCATTGGCCCATGAACATTTCCTGCTTGTTGTCAAACTGATTCATAAGAGGGAATTCAACCATAACTTAAAATAGCTTTTATAACATCATTCAAATGTGGACCTTTTTAGATTCTTTGAAGCTATGAAAATGAAAAAGTAAAACAGGAAATATGTTAGGACCATTGTTATCTTTAACGTCCCTCAAAATGGTCTATTTTTATATATTCATCTTAAACAGGTCAAAACTTGCCCCATAAAATGAAGCATTGTTTCCTGCCTGATCTTTCTGCACTTCTAGGTTTATGAATTACCTTTACTTGGATATACGTAGATATTTTGTGTCTCAAAAACAAGACTTGTACTCCCCCTACATTTCGATCTCACTGCATTAGGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33808
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081309 | Nonsense | 357 | 468 | 7 | 9 |
| ENSDART00000144335 | Nonsense | 460 | 571 | 7 | 9 |
Genomic Location (Zv9):
Chromosome 6 (position 8154620)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 9336539 |
| GRCz11 | 6 | 9572078 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCCTGGAAATGGACGTGTTACACATGATGATCTGATCGTTGGAGGTTA[T/A]CTTATTCCTAAAGGGGTAAGAGCAGCATGTATCATGTAACTGACCATTTC
Long Flanking Sequence:
TGGAATGCATGCATTTTCATAAATCGTACATTAAACAACTTGTATATTGAGATCTTTGAATCTCGAAATAAAAGAATATTTTCCAACCTTCTAACAGAGACAGAGAATTTCTTCAGAATTCCTCAACATTTTGATCCCTCTGCTCCTTCACAGACCTCTTTTACGCTGTCGTGGAGCACATACCTTCTGGCGAGGCATCCCACAATACAGCAGCAGATCTTTGAGGAAGTGGACCGAGTGCTGGGTGGTCGAGTCCCAACTGGAGAAGATGTTCCTTATCTGCCGCTTATTAGAGGGCTTGTTAAAGAGACACTCAGGTAAGCTCCGCCCACCATTGTGAAAATAAAATTCATCTTAAATATTGTTATTTAGGTTGAGATACAGGGTGACTGTTTAAAACAAAACATTATTTAACTTCATCCCTCTACTGCACACAGGCTTTTCCCTGTTCTCCCTGGAAATGGACGTGTTACACATGATGATCTGATCGTTGGAGGTTA[T/A]CTTATTCCTAAAGGGGTAAGAGCAGCATGTATCATGTAACTGACCATTTCAATGTGGTGATGTCATTGGCCCATGAACATTTCCTGCTTGTTGTCAAACTGATTCATAAGAGGGAATTCAACCATAACTTAAAATAGCTTTTATAACATCATTCAAATGTGGACCTTTTTAGATTCTTTGAAGCTATGAAAATGAAAAAGTAAAACAGGAAATATGTTAGGACCATTGTTATCTTTAACGTCCCTCAAAATGGTCTATTTTTATATATTCATCTTAAACAGGTCAAAACTTGCCCCATAAAATGAAGCATTGTTTCCTGCCTGATCTTTCTGCACTTCTAGGTTTATGAATTACCTTTACTTGGATATACGTAGATATTTTGTGTCTCAAAAACAAGACTTGTACTCCCCCTACATTTCGATCTCACTGCATTAGGAGGCTTCTGTAAAATGTATTTATTATTTATTACTTCTAATAATTAATTCAAATTCAAATGTAAT
Associated Phenotype:
Not determined