ZMP
rad54b
Ensembl ID:
ZFIN ID:
Human Orthologue:
RAD54B
Human Description:
RAD54 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:17228]
Mouse Orthologue:
Rad54b
Mouse Description:
RAD54 homolog B (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:3605986]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42732 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa2853 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa42732
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000138496 | Essential Splice Site | 327 | 917 | 6 | 15 |
Genomic Location (Zv9):
Chromosome 16 (position 28998703)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 26874477 |
| GRCz11 | 16 | 26747919 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCAGAAAGAGGGCGTGGTCTTCCTTTACGAATGCTTAATGGGAATGAGG[T/G]AAATAAGAGTTGATCGGTTGTTGCTATGTTCTTCATATGCTCGTCTTTGT
Long Flanking Sequence:
ACGTATATGTTGACATTACATGAAACATTAGGTCATGAAAATTTACTTGAAAGTCCTGGAAAAATCAGAACTTTTGTAGGAAAAATGTGTATGAACCCTGCAGGGGTTGTATTATAGGTCAGAAAAATATGTTACATTTTTATATAAACATGTTTGCTGAATGACATCTCAAATTTCTACAATTTATTTACATTTTATTTTTAGAAATTACAAATTTCTAAATTTAAATAAATTTTCTTTAATTTTATTTCATTTATTTAAATTTTATTTAAATAAAAAATTATTTTATTTATTTCCATTTTATTTTATTTACAAGTTATTGATTTTCATCCTTAGGAGCCCTGGTGATGCCACGGCCTACAGCAGATCACCAGTGGCAGTATAATAAATCTGGAGCTCCACTGGTTGACGTGGTCATCGACCCTCACTTGACCAATCACCTTCGGCCACATCAGAAAGAGGGCGTGGTCTTCCTTTACGAATGCTTAATGGGAATGAGG[T/G]AAATAAGAGTTGATCGGTTGTTGCTATGTTCTTCATATGCTCGTCTTTGTTTACACACATGTTTGTGTTTTCGCAGATTGGCTGGCCGCTGTGGGGCGATTCTAGCAGATGAGATGGGATTGGGGAAAACTCTGCAGTGTGTTTGTGTTTTGTGGACATTACTCAGGCAGGGGCCCTATGGTGGACGTCCCGTAATGAAAAGAGCACTTGTGGTTTGTCCTGGAAGTTTGGTGAAGAACTGGGCTGCTGAGTTCAACAAGTGGCTGGGCAGAGAGAGAATCAGTGTTTACACCGTGGACCAGGTGTGTACAGAAGAAGATTATCATGTGTTAATTTGCTGTTCTATTAAAATCAAACACTTTAGCTATTTAATGATTAATAATGATTTATAGTTATCAATGTTGCTTTTCCCCCTGCTTCATAGTTTTATGTTACTTAATACATTTTACTTTTTAGATTATTTTAATGAAAAGAAAGTTAAAAAAACAGCATTTAACTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2853
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000138496 | Nonsense | 693 | 917 | 12 | 15 |
Genomic Location (Zv9):
Chromosome 16 (position 29002696)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 26878470 |
| GRCz11 | 16 | 26751912 |
KASP Assay ID:
554-2920.1 (used for ordering genotyping assays)
KASP Sequence:
ACTCTTGACTTACTCCAGGACGTCTGTGATCAGATAGGCTATAAATGGTG[T/A]CGTCTTGATGGACAGACACCAGTTGGCCAGCGGCAGAAAATTGTTGATTC
Long Flanking Sequence:
AACATGCAAACTCCACACAGAAATGCCAACTCACCCTGCTACCCACTACGCCACCATGCAGCCCTATATTATATTATGTTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTTTATATTTTTTTATTTTATTTTATATTATATTGTATTGTATTATATTGTATTATATTATATTATTTTATATTATATTATATTATATTAAAAACATAACAGTTTTGATTTATCATAATTCATCAACAACATATAACACCTAACATAACTGTGGTCGACCACCATCAGCATGCTGAATCTGAGAATGTCCATTAATTGACTTACTTTATTATCAGTCTTATGTCCAGTTTCTTCTGTCTTTTTCTCCCTAGGGTTGTTTTGGTGTCCAACCACACACAGACTCTTGACTTACTCCAGGACGTCTGTGATCAGATAGGCTATAAATGGTG[T/A]CGTCTTGATGGACAGACACCAGTTGGCCAGCGGCAGAAAATTGTTGATTCCTTCAACAGCCCACATTCGTCCAGCTTTCTACTGCTGCTCAGCTCCAAAGCTGGAGGAGTGGGACTAAACCTCATCGGTGCCTCTCACCTCGTTTTATATGATATAGACTGGAATCCTGCCAATGACATACAGGTCAGTAGAAGCTACAGTAGAAAATAATAAGCCAACAATAAAACCACTGCATATTTATTGCAGTATGACACAAAAAAGAAATAATGCAACTTGTTGCCTTTCAAAATTGGTTAGAAACAATGTAATTAGACAAGCTGATATATGACAAGGTAAAAGGTTCATTCTGCTGTGGCAACCCCTGATAATCAGGTACTAAGCCGAAGGAAAATAAATGAATGATTTACGACAATCTGAAAATCTTTAGCCGAAAAGGCATAAAAGTTAGTGCTAGCGGTTTCTGTCTAGCAGAACATGGGAAGCGAGGCCAATTTTTAAAT
Associated Phenotype:
Not determined