ZMP

pcdh1a3

Ensembl ID:

ENSDARG00000091924

ZFIN ID:

ZDB-GENE-050202-3

Description:

protocadherin 1 alpha 3 [Source:RefSeq peptide;Acc:NP_001019268]

Human Orthologues:

PCDHA1, PCDHA10, PCDHA11, PCDHA12, PCDHA13, PCDHA2, PCDHA3, PCDHA4, PCDHA5, PCDHA6, PCDHA7, PCDHA8, PCDHA9

Human Descriptions:

protocadherin alpha 1 [Source:HGNC Symbol;Acc:8663]
protocadherin alpha 10 [Source:HGNC Symbol;Acc:8664]
protocadherin alpha 11 [Source:HGNC Symbol;Acc:8665]
protocadherin alpha 12 [Source:HGNC Symbol;Acc:8666]
protocadherin alpha 13 [Source:HGNC Symbol;Acc:8667]
protocadherin alpha 2 [Source:HGNC Symbol;Acc:8668]
protocadherin alpha 3 [Source:HGNC Symbol;Acc:8669]
protocadherin alpha 4 [Source:HGNC Symbol;Acc:8670]
protocadherin alpha 5 [Source:HGNC Symbol;Acc:8671]
protocadherin alpha 6 [Source:HGNC Symbol;Acc:8672]
protocadherin alpha 7 [Source:HGNC Symbol;Acc:8673]
protocadherin alpha 8 [Source:HGNC Symbol;Acc:8674]
protocadherin alpha 9 [Source:HGNC Symbol;Acc:8675]

Mouse Orthologue:

AC020968.2

Mouse Description:

protocadherin alpha-3 [Source:RefSeq peptide;Acc:NP_619603]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa34891	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa34891

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000108584	Nonsense	362	787	1	4

Genomic Location (Zv9):

Chromosome 10 (position 21641987)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	21603401
GRCz11	10	21560782

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCTGATAGAAAGTGTGAAAGAGGACGCAAAGCCCGGAACTGCCGTAGCTT[T/A]AGTCACAGTGTCTGATAAAGATGGGGGTAAAAATGGCATTGTACAATGTG

Long Flanking Sequence:

AGAAAAGCAAGCCGTTATTCACTTAATTTTAACTGCTGTTGATGGAGGGAAACCTCCTAAATCTGGAACCTTGAGTATTATTGTTGAGGTTATGGATGTAAACGATAATAAACCTATTTTCAGCAAATCTTTATACAAAGTTAAAGTGAAGGAAAACAGCCAATTTGGAGCTAAAATCATTACCATTTCTGCCAGTGATTTGGATGAGGGCACTAATGGGCAAATTCAATATTCATTTCTTGGAAATACCGATGAACAAAACCTTTTTACAATAAATTCTAATTCAGGGGTAATTGTTGTTCAAGGTCAAATTGATTATGAGGAGAACCCTGCCATTCAACTCCGTGTTCAGGCTAAAGATAAAGGCAGTCCTCCTAAAAGCACTCACTGTAAAGTTTTAATAGAAGTTGTGGATGAAAATGATAATGCGCCAGAAATAGTTACAACACCTCTGATAGAAAGTGTGAAAGAGGACGCAAAGCCCGGAACTGCCGTAGCTT[T/A]AGTCACAGTGTCTGATAAAGATGGGGGTAAAAATGGCATTGTACAATGTGCTCTGAAAGGTTTGTTTCCTTTCAAACTAGAGACATCATACAATAATCATTATTCTCTAGTGGTAGATGGACCTCTGGACAGAGAGAGTGTTTCTCAGTATAACATCACTATTACAGCTGCAGATGAAGGAACTCCGCCTCTTTCCAGCAGCACAGTTATAACTGTTCATGTCTCTGATGTTAATGACAATGCTCCACATTTCCCAGCACCCGTTATTAACGCTTTTCTAAGTGAGAATAGTCAAGCTGGAGGTCTCGTGACAAAAGTGACTGCTGATGATTCAGACACTGGTGAGAACGCAGAACTTTCATATTCACTGTTAGACAGTTCCAGCTCCAGCATTCCTGTAACAACACTGATAAATATCAACTCTTTAAGTGGAGAAATATTCAGTTTGCAATCATTTAATCACGAAGAGACCAAAAGATTTCAATTTCAAGTTACAGCAA

Associated Phenotype:

Not determined