ZMP
si:ch73-162j3.4
Ensembl ID:
ZFIN ID:
Human Orthologue:
PDZD4
Human Description:
PDZ domain containing 4 [Source:HGNC Symbol;Acc:21167]
Mouse Orthologue:
Pdzd4
Mouse Description:
PDZ domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2443483]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa43893 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa31076 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa43894 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43893
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004678 | Nonsense | 426 | 821 | 7 | 7 |
ENSDART00000138198 | None | None | 78 | None | 3 |
The following transcripts of ENSDARG00000090564 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 261423)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 232414 |
GRCz11 | 23 | 245207 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGGAAGCATCCCTGTCGATATGAACTGCAACGAGAGTTTGATGCAGCAC[G/T]AAATCGCTCTTCTGGATGAGGAAATACGACATCTGGAGTTTAAATGGCGC
Long Flanking Sequence:
ACCACCGCAGCAAAGCCAGCTCCCTGCTGAGTGACGTCAGCGGGATTCGAGCTAATCGGCCGAATTTGTGGCACACGGCCCTCAATAACAGCCAGGAGCTGGACAGCGGTGTGGGCCGCACGGATGAGAGCACACGCTGCGAAGAGTCCTCAGAACTGGCTGAAGATGCCACCAGTGCATGCACCACCAACGCCACCAACACGCCGGGCAGCCTGCGCAAGTTTAAAGCGGCTCAGCATGGGTTTGAGTTCCACTACAGCAATGACTCTTTACTGGGACCAGATGGGGTGGACCACGGAGCTCCTGAATCACTGGGAGCAAGCAAAGTGCCGGGGTTAACCGAAGAAGAATACGAACGCTACCGAGAGCTTCTGGAGATCCGCTGCCTTTACGAGAAGAACGGAAACGCACTTCTGTATTTGGATGGAAGAAACCAGTGTGACTTTGCAGGGGGAAGCATCCCTGTCGATATGAACTGCAACGAGAGTTTGATGCAGCAC[G/T]AAATCGCTCTTCTGGATGAGGAAATACGACATCTGGAGTTTAAATGGCGCAATGTCTTGCGCGCACAGAAGATGCAGCAGTTGCGCCAACGCTGCTTAAAGGTCTGGCCTGCTGATGAAGAGGACGATGAAGACAAAGGAGCAAAGGCAAGATGTGGAGGCGCAGAATCAATCCACCATGACCTCTCGGATATCAACGAGATCCCAGAAAGGGAGCGTTCTGATAAGGAAAGCACAAGCGCATATAACACTGGAGGGGAGAGCTGTAGGAGCACACCTCTGGCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31076
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004678 | Nonsense | 686 | 821 | 7 | 7 |
ENSDART00000138198 | None | None | 78 | None | 3 |
ENSDART00000004678 | Nonsense | 686 | 821 | 7 | 7 |
ENSDART00000138198 | None | None | 78 | None | 3 |
The following transcripts of ENSDARG00000090564 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 262205)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 233196 |
GRCz11 | 23 | 245989 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAA
Long Flanking Sequence:
GCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCACACTAATGGAGCTAGTGGGGTAGTAAAAGGGGGACGGAGTGCTGAAAACAGCCCATATCTGTCCCGCCGGCACTGCAGCACCACACTGCCTCAACGCTACCAGAGCTGCATGCAACTGAGAGATGTGACCATCAATGACGGGAATACTGAAGAAGATCCTGCTCACTCCAGCACGACACCTACTGCTAATAAAGACACCACTGCTACTGCCGTGAATATCCCACCTCCATCTTCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAAGATTCGTGAGGAGCGCAGCGGGATGACCACAGACGATGACGCGGTGAGCGAAATGAAAATGGGGAGATATTGGAGCAAAGAGGAGCGCAAGCAGCAGCTGCTGAGAGCCCGGGAACATCGGAGACGGCGGGAGTTCATGATGCAGAGTCGACTGGACTTCTTGAGGGAGAAAGAAAAGGAGCAAGACTCCGGACCACAGGCTTCCATACTGGAGCTGAGCCAGAAGAAGAGCATGAAGAAGCGCAGCCGACGCATCCTGGACAACTGGATCACCATTCAGGAGCTGCTGGCTCATGGATCCAGCTCTGTGGATGGGAAGAAAGTCTACAACCCGTTGCTCTCCGTGACCACTGTCTGATCGACAGCCAGACTCTAATGAAGTAAGAGTGGAGATGACTGCAAAGTTTAGCCAAGTCTGATGAAGATGCCTAGAGGAATACTCCAGAAACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43894
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004678 | Nonsense | 686 | 821 | 7 | 7 |
ENSDART00000138198 | None | None | 78 | None | 3 |
ENSDART00000004678 | Nonsense | 686 | 821 | 7 | 7 |
ENSDART00000138198 | None | None | 78 | None | 3 |
The following transcripts of ENSDARG00000090564 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 262205)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 233196 |
GRCz11 | 23 | 245989 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAA
Long Flanking Sequence:
GCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCACACTAATGGAGCTAGTGGGGTAGTAAAAGGGGGACGGAGTGCTGAAAACAGCCCATATCTGTCCCGCCGGCACTGCAGCACCACACTGCCTCAACGCTACCAGAGCTGCATGCAACTGAGAGATGTGACCATCAATGACGGGAATACTGAAGAAGATCCTGCTCACTCCAGCACGACACCTACTGCTAATAAAGACACCACTGCTACTGCCGTGAATATCCCACCTCCATCTTCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAAGATTCGTGAGGAGCGCAGCGGGATGACCACAGACGATGACGCGGTGAGCGAAATGAAAATGGGGAGATATTGGAGCAAAGAGGAGCGCAAGCAGCAGCTGCTGAGAGCCCGGGAACATCGGAGACGGCGGGAGTTCATGATGCAGAGTCGACTGGACTTCTTGAGGGAGAAAGAAAAGGAGCAAGACTCCGGACCACAGGCTTCCATACTGGAGCTGAGCCAGAAGAAGAGCATGAAGAAGCGCAGCCGACGCATCCTGGACAACTGGATCACCATTCAGGAGCTGCTGGCTCATGGATCCAGCTCTGTGGATGGGAAGAAAGTCTACAACCCGTTGCTCTCCGTGACCACTGTCTGATCGACAGCCAGACTCTAATGAAGTAAGAGTGGAGATGACTGCAAAGTTTAGCCAAGTCTGATGAAGATGCCTAGAGGAATACTCCAGAAACA
Associated Phenotype:
Not determined