Busch Lab

ZMP

si:ch73-162j3.4

Ensembl ID:
ENSDARG00000090564
ZFIN ID:
ZDB-GENE-090313-136
Human Orthologue:
PDZD4
Human Description:
PDZ domain containing 4 [Source:HGNC Symbol;Acc:21167]
Mouse Orthologue:
Pdzd4
Mouse Description:
PDZ domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2443483]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa43893 Nonsense Mutation detected in F1 DNA Not yet available
sa31076 Nonsense Mutation detected in F1 DNA Not yet available
sa43894 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43893
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004678 Nonsense 426 821 7 7
ENSDART00000138198 None None 78 None 3

The following transcripts of ENSDARG00000090564 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 261423)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 232414
GRCz11 23 245207
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGGAAGCATCCCTGTCGATATGAACTGCAACGAGAGTTTGATGCAGCAC[G/T]AAATCGCTCTTCTGGATGAGGAAATACGACATCTGGAGTTTAAATGGCGC
Long Flanking Sequence:
ACCACCGCAGCAAAGCCAGCTCCCTGCTGAGTGACGTCAGCGGGATTCGAGCTAATCGGCCGAATTTGTGGCACACGGCCCTCAATAACAGCCAGGAGCTGGACAGCGGTGTGGGCCGCACGGATGAGAGCACACGCTGCGAAGAGTCCTCAGAACTGGCTGAAGATGCCACCAGTGCATGCACCACCAACGCCACCAACACGCCGGGCAGCCTGCGCAAGTTTAAAGCGGCTCAGCATGGGTTTGAGTTCCACTACAGCAATGACTCTTTACTGGGACCAGATGGGGTGGACCACGGAGCTCCTGAATCACTGGGAGCAAGCAAAGTGCCGGGGTTAACCGAAGAAGAATACGAACGCTACCGAGAGCTTCTGGAGATCCGCTGCCTTTACGAGAAGAACGGAAACGCACTTCTGTATTTGGATGGAAGAAACCAGTGTGACTTTGCAGGGGGAAGCATCCCTGTCGATATGAACTGCAACGAGAGTTTGATGCAGCAC[G/T]AAATCGCTCTTCTGGATGAGGAAATACGACATCTGGAGTTTAAATGGCGCAATGTCTTGCGCGCACAGAAGATGCAGCAGTTGCGCCAACGCTGCTTAAAGGTCTGGCCTGCTGATGAAGAGGACGATGAAGACAAAGGAGCAAAGGCAAGATGTGGAGGCGCAGAATCAATCCACCATGACCTCTCGGATATCAACGAGATCCCAGAAAGGGAGCGTTCTGATAAGGAAAGCACAAGCGCATATAACACTGGAGGGGAGAGCTGTAGGAGCACACCTCTGGCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31076
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004678 Nonsense 686 821 7 7
ENSDART00000138198 None None 78 None 3
ENSDART00000004678 Nonsense 686 821 7 7
ENSDART00000138198 None None 78 None 3

The following transcripts of ENSDARG00000090564 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 262205)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 233196
GRCz11 23 245989
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAA
Long Flanking Sequence:
GCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCACACTAATGGAGCTAGTGGGGTAGTAAAAGGGGGACGGAGTGCTGAAAACAGCCCATATCTGTCCCGCCGGCACTGCAGCACCACACTGCCTCAACGCTACCAGAGCTGCATGCAACTGAGAGATGTGACCATCAATGACGGGAATACTGAAGAAGATCCTGCTCACTCCAGCACGACACCTACTGCTAATAAAGACACCACTGCTACTGCCGTGAATATCCCACCTCCATCTTCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAAGATTCGTGAGGAGCGCAGCGGGATGACCACAGACGATGACGCGGTGAGCGAAATGAAAATGGGGAGATATTGGAGCAAAGAGGAGCGCAAGCAGCAGCTGCTGAGAGCCCGGGAACATCGGAGACGGCGGGAGTTCATGATGCAGAGTCGACTGGACTTCTTGAGGGAGAAAGAAAAGGAGCAAGACTCCGGACCACAGGCTTCCATACTGGAGCTGAGCCAGAAGAAGAGCATGAAGAAGCGCAGCCGACGCATCCTGGACAACTGGATCACCATTCAGGAGCTGCTGGCTCATGGATCCAGCTCTGTGGATGGGAAGAAAGTCTACAACCCGTTGCTCTCCGTGACCACTGTCTGATCGACAGCCAGACTCTAATGAAGTAAGAGTGGAGATGACTGCAAAGTTTAGCCAAGTCTGATGAAGATGCCTAGAGGAATACTCCAGAAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43894
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004678 Nonsense 686 821 7 7
ENSDART00000138198 None None 78 None 3
ENSDART00000004678 Nonsense 686 821 7 7
ENSDART00000138198 None None 78 None 3

The following transcripts of ENSDARG00000090564 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 262205)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 233196
GRCz11 23 245989
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAA
Long Flanking Sequence:
GCTAGCGAACGAAACCCTTCGCTGTCCGCAGCTGGAGACTCCAGTGCCTCTGCAACCATGCGGCCTCGGACGCCACGTCACAAAACAAGGGAAAGGAATCCAAACTCTGCAGACGTCAAGAAAAAGAGCGAAGAATTGGGGGACGTCAAAAATCCAGCAGCAAGGGTTAGGAACGGCGGCGGTAGGAAGGGTTTGGATGGACCGCGAAGGGGATCCCACACTAATGGAGCTAGTGGGGTAGTAAAAGGGGGACGGAGTGCTGAAAACAGCCCATATCTGTCCCGCCGGCACTGCAGCACCACACTGCCTCAACGCTACCAGAGCTGCATGCAACTGAGAGATGTGACCATCAATGACGGGAATACTGAAGAAGATCCTGCTCACTCCAGCACGACACCTACTGCTAATAAAGACACCACTGCTACTGCCGTGAATATCCCACCTCCATCTTCACCTAGGATGGAGTGGAAGGTGAAGATCCGCAGCGATGGCTCAAGGTA[C/A]GTGGCTAAACGCCCTGTAAGAGATCGTCTGCTGAAGGCTCGTGCCATGAAGATTCGTGAGGAGCGCAGCGGGATGACCACAGACGATGACGCGGTGAGCGAAATGAAAATGGGGAGATATTGGAGCAAAGAGGAGCGCAAGCAGCAGCTGCTGAGAGCCCGGGAACATCGGAGACGGCGGGAGTTCATGATGCAGAGTCGACTGGACTTCTTGAGGGAGAAAGAAAAGGAGCAAGACTCCGGACCACAGGCTTCCATACTGGAGCTGAGCCAGAAGAAGAGCATGAAGAAGCGCAGCCGACGCATCCTGGACAACTGGATCACCATTCAGGAGCTGCTGGCTCATGGATCCAGCTCTGTGGATGGGAAGAAAGTCTACAACCCGTTGCTCTCCGTGACCACTGTCTGATCGACAGCCAGACTCTAATGAAGTAAGAGTGGAGATGACTGCAAAGTTTAGCCAAGTCTGATGAAGATGCCTAGAGGAATACTCCAGAAACA
Associated Phenotype:
Not determined