Busch Lab

ZMP

LOC100332857

Ensembl ID:
ENSDARG00000089458
Human Orthologue:
RP1L1
Human Description:
retinitis pigmentosa 1-like 1 [Source:HGNC Symbol;Acc:15946]
Mouse Orthologue:
Rp1l1
Mouse Description:
retinitis pigmentosa 1 homolog (human)-like 1 Gene [Source:MGI Symbol;Acc:MGI:2384303]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa36294 Nonsense Mutation detected in F1 DNA Not yet available
sa39138 Nonsense Mutation detected in F1 DNA Not yet available
sa36295 Nonsense Mutation detected in F1 DNA Not yet available
sa39139 Nonsense Mutation detected in F1 DNA Not yet available
sa22985 Nonsense Available for shipment Available now
sa42856 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa36294
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 156 2394 1 3
Genomic Location (Zv9):
Chromosome 17 (position 5562677)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5643872
GRCz11 17 5800968
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAACACCCGCCGAAAGCCGTCCCGACCTGATGAACCCCTATCAGGACAC[C/T]AACACCACCATCATCGGCACCCCAAAAGGATTATTCTCGTGAAAAACAGT
Long Flanking Sequence:
TTTTTTTTTGCAGTGTGATCTGATGTGGATGAGAGATGCAGAGGACGGCTCAAGGCTTTTTCGACGCTGATCCCCATTTCCACAATGAACCCTATCAGTTTCCTCATCCTCCAACATCATCTTTCGGCTCCATCGTGACTGCATCGAGTCCAGTCAAGAGAATTACTTTCTACAAGAGCGGCGACTCCCAGTTCAAAGGCGTCAAGATGGCCGTCCATAAACGCACCTTCAAATGCTTTGATGCCTTACTGGATGACCTTTCTCAAAAGGTTCCCCTGCCTTTCGGTGTACGTACCATCACAACGCCCAGAGGAACCCACAGCATTAAACATTTAGAGCAGTTCGAGGATGGAGGGTGTTATCTCTGCTCCGACCGCCGATATGTAAAACCAATCAACATGGAAGAAGTAGGAAAAAGGCAGGCGGTCTGGCACCACCATAGCCATCCAAATAACACCCGCCGAAAGCCGTCCCGACCTGATGAACCCCTATCAGGACAC[C/T]AACACCACCATCATCGGCACCCCAAAAGGATTATTCTCGTGAAAAACAGTGACCCCGCTGTTCGCCGATCTATTATTCTGAGTCGACGAACCGCTCGCAGTCTTCGAGTCTTTACGGAGGAGATTTCAGAGCTCATGCAGTGTCACGTCAAGAGACTGTACACCCTGGAGGGGCGCAAGGTCAGGACTTTATTTCTTCAGCCAATCTTTAACAAACAGCTAGTGTTTTTAAGCCAACAATAGACTTCTGGTGAATTTGATAAGGTTTCTTTTACAGCATCGATGTTGTAATGTAATTAAAATACAATCAGTTAAATAGACTTCATTATTCATTTAGTTGTTCAAGTTTAAAACGAGATTTGAGACCTTGTAAACGTAAGTGCCATCAGTAGCTGCAGGCTAGCACAAAAACATCATTGAGAATACTGGAGTAAAAAAGACATGACGGTGTAAGAACGGGTTTAAACCACAGCGGTTCGAACTGTGGTTTTGCCGAATGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39138
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 249 2394 2 3
Genomic Location (Zv9):
Chromosome 17 (position 5573651)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5654846
GRCz11 17 5811942
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGTCGAGAACCATTCAGGCCGTTGCTCGTTGAAAGCTTGAAGAAACTCT[C/A]AGATGAAAAGCTTCCTGGAGTGGGCACGAGGTCACACTCCAGCGTCTGCA
Long Flanking Sequence:
ATGGAATTAGATTGCTTATTGAGTAATTAAATAACTTTTCAGACAAACTATTCAGATTTGTAATTGCATACTTATTTGAAGCAACTTAACCGAAACTGGATAATAGAAAGTAGCTGTTTATGTAGACCAGTGGTCACCAAACTTGTTCCTGGAGGGCCGGTGTCCGGCAGATTTTTGCTCCAACCCTAATCAAACACACCTGAACAAGCTAATCAAGGTCTAACTAGGTATACTTGAAACATCCAGGCAGGTGGGTTGAGGCAAGATGGAGCTAAACTCTGCAGGGACACCGGCCCTCCAGGACCAGGATTGGTGACCCCTGATGTAGACAGTAAGCATGAGTGTATCTGACTCATTGTTTGTTTGTTTTTTTGCCTTGTTTATTCACCCCTGTCCTTAGATCGACAGTATTCAGAGTCTGATGCAGTGTCCCAGTGTGCTGGTCTGTGTGGGTCGAGAACCATTCAGGCCGTTGCTCGTTGAAAGCTTGAAGAAACTCT[C/A]AGATGAAAAGCTTCCTGGAGTGGGCACGAGGTCACACTCCAGCGTCTGCAGTGAAGGCCATGAAAGCAAAAAGAATGGTAAATATTTTCTCTCACTGTGCGCACAGTTCAAGTTAATTACCGTTTACCTTCATTTGTTTTAGGTGAGTCATTATAGTGATTAACAACCTATCCTCCCACATGTCCCTAATAATAGACTGAAGATAAAACAAACACCAGCTTAAATGTTGTGAATGCCTAGTCTTAATGCATATGCATTATCAACCCAGCGGGCACCTTGATGACAAAATGACATCAAATAAACGCCAAAAACACGTTAAAAATGCGAATTGATTTGATGTTAAAACCTTGATGTCTATTTGACATCCACACATTGATCATACCTGTCAACATTGGGATGTGAATATAAGGGATACGCCCACCATAATAAGGGAGAATCCCCCTAAAAAATCCCCCAAATTACTAAATATGCTCATTTGGAGCCGTTTCATTGTAAATAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36295
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 270 2394 2 3
Genomic Location (Zv9):
Chromosome 17 (position 5573713)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5654908
GRCz11 17 5812004
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCTGGAGTGGGCACGAGGTCACACTCCAGCGTCTGCAGTGAAGGCCAT[G/T]AAAGCAAAAAGAATGGTAAATATTTTCTCTCACTGTGCGCACAGTTCAAG
Long Flanking Sequence:
ATTGCATACTTATTTGAAGCAACTTAACCGAAACTGGATAATAGAAAGTAGCTGTTTATGTAGACCAGTGGTCACCAAACTTGTTCCTGGAGGGCCGGTGTCCGGCAGATTTTTGCTCCAACCCTAATCAAACACACCTGAACAAGCTAATCAAGGTCTAACTAGGTATACTTGAAACATCCAGGCAGGTGGGTTGAGGCAAGATGGAGCTAAACTCTGCAGGGACACCGGCCCTCCAGGACCAGGATTGGTGACCCCTGATGTAGACAGTAAGCATGAGTGTATCTGACTCATTGTTTGTTTGTTTTTTTGCCTTGTTTATTCACCCCTGTCCTTAGATCGACAGTATTCAGAGTCTGATGCAGTGTCCCAGTGTGCTGGTCTGTGTGGGTCGAGAACCATTCAGGCCGTTGCTCGTTGAAAGCTTGAAGAAACTCTCAGATGAAAAGCTTCCTGGAGTGGGCACGAGGTCACACTCCAGCGTCTGCAGTGAAGGCCAT[G/T]AAAGCAAAAAGAATGGTAAATATTTTCTCTCACTGTGCGCACAGTTCAAGTTAATTACCGTTTACCTTCATTTGTTTTAGGTGAGTCATTATAGTGATTAACAACCTATCCTCCCACATGTCCCTAATAATAGACTGAAGATAAAACAAACACCAGCTTAAATGTTGTGAATGCCTAGTCTTAATGCATATGCATTATCAACCCAGCGGGCACCTTGATGACAAAATGACATCAAATAAACGCCAAAAACACGTTAAAAATGCGAATTGATTTGATGTTAAAACCTTGATGTCTATTTGACATCCACACATTGATCATACCTGTCAACATTGGGATGTGAATATAAGGGATACGCCCACCATAATAAGGGAGAATCCCCCTAAAAAATCCCCCAAATTACTAAATATGCTCATTTGGAGCCGTTTCATTGTAAATAAACAGTTAAACGGGCAGTAAAATGTTTTAATATCATTATTTACTAACGAAAAAATAAATAGTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39139
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 1126 2394 3 3
Genomic Location (Zv9):
Chromosome 17 (position 5579478)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5660673
GRCz11 17 5817769
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTGAAAGATCCATCAAATCTGAGACACAGAAAACAACACTGAATGCCT[T/G]AACTGTGACCTCACCATTGCCTAGGAAAAAGCAGTCTCCTTCTCCTAGGT
Long Flanking Sequence:
CACAGAGCTTCCTCATGAAGTGAGATCAGCTAGTGCCATGTCTAATAAGTCAAACCAATCTTCACAGCATCCATCAAAAGACTCAAAGAGGTCTGTCAAATCTTGTGAGTTACAAGGCAAAAGTCCCGATGTTCTGTGTGAGTTGAAAACTGAGGAAAGGCAATGCCGTCCACTGTCAAACTGCTCAAAAACATCAGTAAAGTCGAATGAATCTTCAAAACATTCCCAAGCAGAGGCTAAATCCCAGGAAAGAGTTCCCAGCGCAATGTCTGCTAAAACAAATGCTTCTAAAAGATCTTGTAGGTCCTGCAGAGCAAACCACAACATTCCAGAAACCACAGTTACCTCAGTATTAAATGATGCAACACCCGATGAATGTGCAACTCCAACAAACAAGTCAAAAAGAGCCACCAGCCCGATGTCTCAGACCTCAGAAAAGTCTAATGCTTGTTCTGAAAGATCCATCAAATCTGAGACACAGAAAACAACACTGAATGCCT[T/G]AACTGTGACCTCACCATTGCCTAGGAAAAAGCAGTCTCCTTCTCCTAGGTCAACCCACAATAGTAAAAGCAAGAAGACTGATAGCAGAGCAGCAAGTGGCATGTCAGAAAACTCGAATGTGTCCCGAAGATCTGGCAAATGTAATTGTCTTGGCTCCTCAAATGGTGATTTGAAAGAGAAATTAAAGGAAGATGCCAAAGATGTATCTGGTTTTCCTGACAAGATCCCTTCGGATTCAACTCTTATAAATAATATTAAATCCTCAGATAATCAGTTTGATGAGCCTGTAAGCCCTACATCCACAGCTTCGGTCTCTCTTGGGTTAGGAGAGGATCAGAAAGGTGATGACTTTGATGACCTATCAACAAGTGGCATGTCAGAGGATGGTGGGAATAGGTTGCATGAAGTAAATGGAGTCGATGCAGAGGAAAGGCCTAAGACAGAAGCGTCTGTGAACTCCCATCATAAGTCTCCCGTTCAAGCCCTCTTGCCTGTCTCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22985
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 1705 2394 3 3
Genomic Location (Zv9):
Chromosome 17 (position 5581215)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5662410
GRCz11 17 5819506
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAAAATTAAGCCAGTCTGCTCAAGGGCTTTTGGACTGCCTAGCAAACT[T/G]AAGATTGATTGATTCAGACTCTAAAGATGAAAAGCATCGTAAATACAATG
Long Flanking Sequence:
CCACTCTTCAGAGCACAACACTAAGGAATTGATGCCATCATGTTTGCCAAATGCTTCCCCTACAGAAGTCGTGAACGACTGGCTTAGAAACATTCCCATTGGTGGCTATGTTTATGAAATGGACGTTGAACATACTGAACGTGAAGCTGGTGAGAACGCCTCCCAAAGGGACAAAAGTGAGGCACCAGAAAGCATAATGGAGGTTGAGGAACCTAATGAGAATCCCACAGGAGAGAATCATGTTCAGCAGGAGACCAATGATGTTGAGATACAAGCATGCGATGAAAAAGCACAACTGGAAATGTGTGAAATGGATCACAATCCTAAAACATTAGCCAACCAAGACAGTTTACAAAAGCAGTGTGATTCTTCAGTTCAGGTCATGAAGGTTTTACTCGGTCCAAAACTAGACCGATCCAGTAGTTTACCTGAAGTTTCCCCAGTGTATGGCAGAAAATTAAGCCAGTCTGCTCAAGGGCTTTTGGACTGCCTAGCAAACT[T/G]AAGATTGATTGATTCAGACTCTAAAGATGAAAAGCATCGTAAATACAATGAAGTTATGATGATCCTACAGTCGCTCTGGCTCCAAAAGCCCATCGAGGATGAACATATAAAACAAAATGCAAAGGTAAACCAATCTGAGGATGAGTTTAACCTGCGGTATTCATCAGGCGTTGATGTAAATAGTGGTTCCACCAGCTCATTTAAAGGTGAAAAAATAGAGACCTCACAGGGCACAATACCACCAATTGAAAAGCAAGAGATTTCAAGGAATGATAAAGATGATGAAGAAGATGAGGTTAAGTTTACAGAATGTTTAGATTCATCCAAAATCATCCCAGATCCGGTAACTCCAGACATCGCAGAACGAACACAGGGAAGTCCAGTAAACACACGACAGGATGATGACCAGGAAAATGATGTAACTCAAGAAGATGTTTCAAGTTCCGAGAATAAGAATGAATCCGATCAAACGCCACAAACGACTTCTTACAAGAGCTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42856
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126764 Nonsense 1864 2394 3 3
Genomic Location (Zv9):
Chromosome 17 (position 5581691)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 5662886
GRCz11 17 5819982
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAAGATGTTTCAAGTTCCGAGAATAAGAATGAATCCGATCAAACGCCA[C/T]AAACGACTTCTTACAAGAGCTCTGGGAATGAGAGTTACACGATGAAATCT
Long Flanking Sequence:
GGCTTTTGGACTGCCTAGCAAACTTAAGATTGATTGATTCAGACTCTAAAGATGAAAAGCATCGTAAATACAATGAAGTTATGATGATCCTACAGTCGCTCTGGCTCCAAAAGCCCATCGAGGATGAACATATAAAACAAAATGCAAAGGTAAACCAATCTGAGGATGAGTTTAACCTGCGGTATTCATCAGGCGTTGATGTAAATAGTGGTTCCACCAGCTCATTTAAAGGTGAAAAAATAGAGACCTCACAGGGCACAATACCACCAATTGAAAAGCAAGAGATTTCAAGGAATGATAAAGATGATGAAGAAGATGAGGTTAAGTTTACAGAATGTTTAGATTCATCCAAAATCATCCCAGATCCGGTAACTCCAGACATCGCAGAACGAACACAGGGAAGTCCAGTAAACACACGACAGGATGATGACCAGGAAAATGATGTAACTCAAGAAGATGTTTCAAGTTCCGAGAATAAGAATGAATCCGATCAAACGCCA[C/T]AAACGACTTCTTACAAGAGCTCTGGGAATGAGAGTTACACGATGAAATCTCCAGAAAACACAAGCTCAGGAACTCCGCCGTCTGTTCAGAAAGCTACGCTCACTAAAAGAGTTTCACAAGACCCAGATCCTGTTTGGGTCCTGAGCTTGTTAAAAAAGCTAGAAAAGCAGTTCATGCTGCATTACACCGACGCCATGGCGGAGTTTAAAGTGAGGTGGGATTTAGATGACAATGAGATGCTTAATACAATGATAAGCGAACTGAAAGAGGAAGTACACAAACGTATTCAATCAAGTATTAACCGAGAGCTGCAAAAAATCCAAAGCCGCACTGGCAGAGGTCCGAGACCTCCAGGAAATGCACTTTCGAGAGAGTCTACTGCTCAAACCGAGCAACGACGCAAGCGTCTTCGGGTCATGCGCAATAAGTCCATCTTGACAAGGAGTGATGAAGATTACACTGCATCAGGAACTGAAAACAGCGATCAGCGCAGTGATGAT
Associated Phenotype:
Not determined