Busch Lab

ZMP

arhgap20

Ensembl ID:
ENSDARG00000089326
ZFIN ID:
ZDB-GENE-071015-1
Human Orthologue:
ARHGAP20
Human Description:
Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:18357]
Mouse Orthologues:
1700006A11Rik, Arhgap20, Gm1527
Mouse Descriptions:
RIKEN cDNA 1700006A11 gene Gene [Source:MGI Symbol;Acc:MGI:1919074]
Rho GTPase activating protein 20 Gene [Source:MGI Symbol;Acc:MGI:2445175]
predicted gene 1527 Gene [Source:MGI Symbol;Acc:MGI:2686373]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa41438 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa45359 Nonsense Mutation detected in F1 DNA Not yet available
sa41437 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa41438
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130317 Essential Splice Site 25 907 1 15

The following transcripts of ENSDARG00000089326 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 30577757)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29733703
GRCz11 9 29544449
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCAGAAGAGGAGCCGAACCAAAAGTTGTGGGGAATATCATCTCTCCAAT[G/A]TAAGTAAAGCAATGCTAATGGATGATAAACAACATAACGTCATCATAAAA
Long Flanking Sequence:
GTATCAGTCAAAATATCAAAATTTCCCAAAAATCAAACAGTTATAACAGCATACAGTTGTTCTACAAAGTGTAAACATGATCTCCTCTGTCAAAACTGTAGCCATATGTTGTATAGACAGACTTATATCCCATTATGAACCGAGATCCCGCCCCCTAAATCCTCCCCCTGCTGCTCAGAGACACAGACATAATCTTCCATCTTTCAGAGGGGAAAGACAAATACATTGCTCGGATAAATCAAAGTGTGGAGCTTGTGTAGGATCGAAGAGTGGATTTCAACCCTGGATTCAGTGTTTCTACCTCAGTGAAACAGAGAAGCGCAGGACAAAAGTGTGGAGAGGATTATCCAGAGGCAGGTGATGATATGGAAACATTGATCTGGTCAGACCTCTAAATCACCTCTAGTGTTTTTTTACTTTTGAATATGGGGCCACTACATGAGCCAGGATGGCAGAAGAGGAGCCGAACCAAAAGTTGTGGGGAATATCATCTCTCCAAT[G/A]TAAGTAAAGCAATGCTAATGGATGATAAACAACATAACGTCATCATAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTATAACTATAAGATTATACATATAATGTGTGATGTATCCTGTGTTGTTTTAACTCAAATTTATGTAGTATGGGCAACTGTTGGGTTATTTATTTATTTTCTTTGCAGCATTTAACCCAAATTTGTTTAAAACTACTGAGATTATTTTAGAGTGAATATTGTTTTAGATTTTGTACATTATAGCCGATTAAATGTGATTAAATTATGGTACAGCCTATACTCTTTTACTTATACGACAGTGATTTGTTTTATTGTCACTCTGTTTTGCCAGATCAATACAGCTGGTGCAGAATTCTCCAGGGTTTAACTCCCATTCACAAAGCTCCATTAAGAAGATTAATAAAACAAATTCAGTAAAATAATTAAAAAGTACAATTCAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45359
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130317 Nonsense 48 907 2 15

The following transcripts of ENSDARG00000089326 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 30575972)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29731918
GRCz11 9 29542664
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGACAATCTGCTCCCTCAGTTATCCTCAGCAAAGCTCTTTCAAAGTCC[A/T]AACCTGTCTCCAGGTAATACAACAATTAAGCAAATTAACTTTAGATTTAC
Long Flanking Sequence:
ATAGCCACCAGGTGACACCCAAATCCATCCAGTTAGTTTGTTTTTAAGCACCTCCTGGCTCCTGCCTCAAGTTCTGCCTCAAGTCACCAAGTATTGAACCGTACGGTGACTGTCTGATATGTTTAGATTAGAAACGATGTGATTGTAAAACGCCTTAATTTTGTAAAACGAAACCTGACACCGTCCATTAGGGGGAGGAGCTCAACAATAGCATTTCGTTTCCATATTTATGCGACGTCCGATTTCCGAATGGTTTTTCACAATATGCATTTTGAGTTTTCAAGCTTTCAAATGATATACTATTTAGGAAGATCACTATAATTACTACATGCCATAGGAAAAATGCAGAAAACCAGCGTCTCTCTGATTTTCTGTGTGTTGTATGACGCTGATTACATCTTTTTAAATCGTACTGTCTTTTCTTCTTTCTCCAGAAATCCTTCTCTCAGCGCAGACAATCTGCTCCCTCAGTTATCCTCAGCAAAGCTCTTTCAAAGTCC[A/T]AACCTGTCTCCAGGTAATACAACAATTAAGCAAATTAACTTTAGATTTACTAAATATAATGATTATTCAAATGGTTATCAGTGTGTAAATAAATGGTACACTTTTACCATATTTCACATTTCATTCATTCATATGTTTTTATAGAGCTTTTACAGTGTAGATTGTGTCAAAGCAGCTGAATATAGAAATATGTACTAATATAGTAAATTGAAAATACAGTTTTGAGAGTTAAAATCATGGTTGTTATAAAGTAATAGCTGTCTTTTCAAAAGGTACATATTTGTACCTGAAGGGTCCATAACGGTACTTCAAACATTTTTTTCTTTTAGGTACATTTGGGTATTAATATGCACTTTTGAGGTACCATTGTGGACTCTTTGGAAACAAATATGTATCTTTTGAAAAGCTACTGTCCCCTTGACAGCTCCTGTACCTTTATTTCGGAGAGTGTAGATCAAACATGACCATTAAACCATTTTGCAGCCACACTGTAAAAAACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41437
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130317 Nonsense 222 907 7 15

The following transcripts of ENSDARG00000089326 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 30571559)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29727505
GRCz11 9 29538251
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTCAGCAACACAGATTGTACATCTGATGTCATTAGCACAGCACTGCAA[C/T]AGTTTGGTCTTTCGGTAAGTTTAGATTGCACAACAACAACAACAACAACA
Long Flanking Sequence:
CTAACAAAGTGAAAAATAAATATTATATTGCTTAATTTTTTTATAGTACTTTTGTTAATTTGACTGTGTATGTATTGCTATCTATATGATTTCTCTTGTTAAAATAAATGTTTTGTGTGTGTCTACAGCACTTCAGAAGAGAAAGACAGGTGGCTGTTTCTCATTGAAGGGTCAGTCCTTCATACTTTTATTTAAAAAACTATACAATAATAAAAATAAAGAAATATGTCATCGATATCTATTATATAATCTCTCATTTTGTTTAGTTGTATAAAGGAAGAGAAAAAGTGTGATGAGCCGAAGATGATTCCGCTCAAGATATTTGCAAAGGATGTTGGGAATTGTGCCTATGTAAGGACTAAATGATTTGAGCTCTTAAAATACTGAACAGTAGTTTGGAAATGGAAATGAATGTAATTTTGCTTTTGTCTCTGTAGGCCAAGACTCTTTTTGTCAGCAACACAGATTGTACATCTGATGTCATTAGCACAGCACTGCAA[C/T]AGTTTGGTCTTTCGGTAAGTTTAGATTGCACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATATAAATTATTGTATTATTAATTATTCTATTTGTAAATTAATAATTATTAGCATTAATACTCTTTAATATTAATATTTTTCTAATAAAAAATAATAATTTTTAGTTTTTAATTTATGGATTGCTTTTTAATGTGCAATAAATAAAATAATAATAAAAATAGTAATAATAATATTAATAGTAGTTTTTAATATTATTATTAAGTATTATTATTAATAATATTATGCTAATACAAATAGTTAATAATAATTGAATACATTTGTAGCAATTCTTATTGTATTTTTTTTATTACAATTTTATTAATGTTTTTTTATTTAACATTCGTTATTTTAGTCTTTGTTGTGATTAAAGAATATAATTCATATTATTATTGATTATAATATTTTTAAAGAATGAATAAATAAATATT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa5546
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130317 Nonsense 398 907 11 15

The following transcripts of ENSDARG00000089326 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 30568641)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29724587
GRCz11 9 29535333
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGAGTGAAGGCCTGTCGAGAGCTGAAGGAAAAACTGGATTCTGGCCACTA[C/A]GAGGAACCGCTGACTGGAGAATCTGTACTAGTTACTGCTGCAGTGTTTAA
Long Flanking Sequence:
TTTTAAAAGCTGTTATGTTATATTTTTTAAACTGAAAAGTTGTGGATAATTCTGGATTTGTAATTGTGTTCCACATTTGAGTTTTGTGGTTACTGTGATATTTTGATTATACTTAAAACAGTTACATGCCTGGCATGGGAAATTTCAAACATATAATGAAGTAAATTTTGAAAAAAAAATAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAGCTGACTTAAATGTTTTCAAATTCTTTTTTTATGGTAATGCAATTTGTAATGTTAAAACAGGATGAATACATGTTGAACTATGTGATAGAGAACAGGACAATAAAAACAACACATTATTCCTTATTCATAATCTTAAACCCACCTGGTTTTTCTCCAGGACATGCTGAGGTGTTTGTGCAACGAAGGCGTCGTGACTCGAGGAATATTTCGGCGTTCTGCAGGAGTGAAGGCCTGTCGAGAGCTGAAGGAAAAACTGGATTCTGGCCACTA[C/A]GAGGAACCGCTGACTGGAGAATCTGTACTAGTTACTGCTGCAGTGTTTAAGGTAATCTATGGAGAATGAGAAAACATTTATTCATGTACACTGTTCAAAAGTGTGTAAACATTTGAGTTTGTTTTTCAAAGTCTCTTACGATATATTTTTTATTTATTTGATTAAAAATGAAAGTGAAAACAATTATTGTAAAATATTATTATTAATTTAATAATAATTAGATTTCTATTTGAATATGATTTATATACAGTATATATATATATATATATATATATATAAAATAAATATAATAAAATAAAACTAATATATTTTGAATTCAAATAAAATAAATGATAACTGAAAATAAAATACATAAGCTAAATTACTAATACTAAGGCTGTGTGTTTACCTAAGGTGGTTAATTTTTTTCCAGTTGTTTTCAGTAAATGCCACATTTTTTAGAACACTAGCAGCATGACGAAGTGCTGAGCATCAGTTTCACGCAAACTGCCAAGTGCTCT
Associated Phenotype:
Not determined