Busch Lab

ZMP

CSGALNACT1 (2 of 2)

Ensembl ID:
ENSDARG00000089233
Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]
Human Orthologue:
CSGALNACT1
Human Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]
Mouse Orthologue:
Csgalnact1
Mouse Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 1 Gene [Source:MGI Symbol;Acc:MGI:2442354]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa7623 Missense Mutation detected in F1 DNA Not yet available
sa11541 Nonsense Available for shipment Available now
sa8459 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa7623
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130358 Missense 39 412 1 7
Genomic Location (Zv9):
Chromosome 8 (position 704033)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 570633
GRCz11 8 636299
KASP Assay ID:
554-4162.1 (used for ordering genotyping assays)
KASP Sequence:
CTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTYCAGAGMTTC[A/T]GTCTCCGCAGCGTCTGTCAGYTGGAGACCGGCCTYAGCAGACGACCARAG
Long Flanking Sequence:
CATCCCAAAAGATGGAGATCTGGAGCAGGATTTGCTGGAGCTCCAGGACCAGCACTTTCTGCAGCTCTCCACCAACCTCAGCAGACTCATACAAGGTTATTATAGAGCTGCATTTTAATATGAGTTCAGTAACACTTTAGTTTAGGTCACAATTCCTATCATTTACTACCTACTGGCTTATTACCTGCCTATCATTCAGATATTAACTGTGCAGGGTGTATTAGTAGCTAAAAACAGTACTATCTTATTCTGCATCTCTATTCCTATCCTAAACCGTCTTGTCACTCAGCCATCAACTCTGTCATCCATCAACTCTATTAACCATCAACTCTTCTGTCCTGATCTCAGAGCTGCGGGGCGAGCTGCGCCGGTCTGCGTTTGCTCTTCCAGAGGATCAGCAGGAGCTGCAGGATTTCCTCCATCAGCAGATCCTCCGGGCCGAGAGCAGATCTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTCCAGAGCTTC[A/T]GTCTCCGCAGCGTCTGTCAGCTGGAGACCGGCCTCAGCAGACGACCAGAGGAGGCAGAGCTCAGACCTGACCGCAGGAATGAGCTGAACGAGGCTCTAGAGGCGGCGCTACACCTGCTGAACCAGCCGGAGCCTGGAGACTCACAGACCAGGAGGATTTACTCTCCCAAACACTTCTCTGAAGGTCAGAGACACACAGAGATACTGATTTCTGAAGCGCTTTCAAAAATAACATACTGATGCAATGCGATATTTACTTATGTACCTATAGGACATTTTTGGCAGAGACTGATTTAGACAAAAAACGTTGACCAATACCATATATGACACCAACTTTAACCTTCAGCTGGTACCAATACCAATGTTAATGATAAAAAAAACAAAAAAACATTGACCAATATCAATGTAATGTAAATGCAAAACATTTTCCCATACAGATTTACAAAAAAAAAAGAAACTTAATCTGGTACTGATACCAATTTTAATAAAAAAAAAAAAAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130358 Nonsense 44 412 1 7
Genomic Location (Zv9):
Chromosome 8 (position 704050)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 570650
GRCz11 8 636316
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACGAGTTTATGGTTCTGCCCTTYCAGAGMTTCWGTCTCCGCAGCGTCTG[T/A]CAGYTGGAGACCGGCCTYAGCAGACGACCARAGRAGGCAGAGCTCAGACC
Long Flanking Sequence:
ATCTGGAGCAGGATTTGCTGGAGCTCCAGGACCAGCACTTTCTGCAGCTCTCCACCAACCTCAGCAGACTCATACAAGGTTATTATAGAGCTGCATTTTAATATGAGTTCAGTAACACTTTAGTTTAGGTCACAATTCCTATCATTTACTACCTACTGGCTTATTACCTGCCTATCATTCAGATATTAACTGTGCAGGGTGTATTAGTAGCTAAAAACAGTACTATCTTATTCTGCATCTCTATTCCTATCCTAAACCGTCTTGTCACTCAGCCATCAACTCTGTCATCCATCAACTCTATTAACCATCAACTCTTCTGTCCTGATCTCAGAGCTGCGGGGCGAGCTGCGCCGGTCTGCGTTTGCTCTTCCAGAGGATCAGCAGGAGCTGCAGGATTTCCTCCATCAGCAGATCCTCCGGGCCGAGAGCAGATCTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTCCAGAGCTTCAGTCTCCGCAGCGTCTG[T/A]CAGCTGGAGACCGGCCTCAGCAGACGACCAGAGGAGGCAGAGCTCAGACCTGACCGCAGGAATGAGCTGAACGAGGCTCTAGAGGCGGCGCTACACCTGCTGAACCAGCCGGAGCCTGGAGACTCACAGACCAGGAGGATTTACTCTCCCAAACACTTCTCTGAAGGTCAGAGACACACAGAGATACTGATTTCTGAAGCGCTTTCAAAAATAACATACTGATGCAATGCGATATTTACTTATGTACCTATAGGACATTTTTGGCAGAGACTGATTTAGACAAAAAACGTTGACCAATACCATATATGACACCAACTTTAACCTTCAGCTGGTACCAATACCAATGTTAATGATAAAAAAAACAAAAAAACATTGACCAATATCAATGTAATGTAAATGCAAAACATTTTCCCATACAGATTTACAAAAAAAAAAGAAACTTAATCTGGTACTGATACCAATTTTAATAAAAAAAAAAAAAACTAACCGACAACAATACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8459
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130358 Essential Splice Site 295 412 5 7
Genomic Location (Zv9):
Chromosome 8 (position 711067)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 577667
GRCz11 8 643333
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCCAGAACTCCTCTACGGCCAGCACGTTCCTCCTGCTCAACAGCAGATG[G/A]TAAGAGCTCTTAAAGTCACTGTCAGCAGCCATGCTTCCATCCAAAGATGT
Long Flanking Sequence:
TCAACTCCTGCCGCATCAACGCGCAACCAGGTAGAGAGATTTTAGAAGAGAAATTGAACCAATTTGCATGGCTTCAAAGCTTTGAATATTTGTTATAATATGAACACAATGAAGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGCGTGGGTTATCTGTAGTAAAGATGACAAATTGTTCCTCTTCCTAACAAGAATGCATGATATGCCGCCATGGCTTTGCTATCAATACATGTGATTATAATGGAAGTCAATGGGGCAAAAACAGCACCAACAGAACCAAACTTGAAAAATACACAAGGGTTATATGGGTTAAAGTCAGTGTGTTTCATGTGATCTCAGACTGTTGGAGGTCATGCACTGAACTCTTATTGGTGTGTTTGTGCGCTGTCGCAGGTCAGAAGGTTTTCTATCCAGTGATGTTCAGTCTGTATAATCCAGAACTCCTCTACGGCCAGCACGTTCCTCCTGCTCAACAGCAGATG[G/A]TAAGAGCTCTTAAAGTCACTGTCAGCAGCCATGCTTCCATCCAAAGATGTAAATTAGATGTAATATCGCATTAAACATTTGAGAATAAAGCCGAGCTTCCAAACAAGAGTAGTAAATCATCAGTTTCATGCACTGATATCGCTGAGAGGAGTGTAGTGTGCGGCACTGTTGGGATTCTCCACTGTGCTGTTTGTTCTCCCCTAATAATTGAGCTGCGCATAAAGAAGACCAAGACCAAACGCAATGAACGAGGAGGCTTCTGGAGACGTGAGACGAGAGCGCAGACTGATGATCAAGACAGCTCTGGAGGGAATAATAATAGGAGAAGAACACTGAAGCACTGTGATGACGGACTGACAGAGGGCTGAGGCCTTTTACTGCACTCTAAAATTATTGTTTTGACAAAACAAAACAAAATTAATGCAACAGCTTGCATTAATATATTCAAGTTACGACAGCATCTAACAAAATGAGGTTCAGACAACAAACTTTATTATGTT
Associated Phenotype:
Not determined