ZMP

CSGALNACT1 (2 of 2)

Ensembl ID:

ENSDARG00000089233

Description:

chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]

Human Orthologue:

CSGALNACT1

Human Description:

chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]

Mouse Orthologue:

Csgalnact1

Mouse Description:

chondroitin sulfate N-acetylgalactosaminyltransferase 1 Gene [Source:MGI Symbol;Acc:MGI:2442354]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa7623	Missense	Mutation detected in F1 DNA	Not yet available
sa11541	Nonsense	Available for shipment	Available now
sa8459	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa7623

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Missense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000130358	Missense	39	412	1	7

Genomic Location (Zv9):

Chromosome 8 (position 704033)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	570633
GRCz11	8	636299

KASP Assay ID:

554-4162.1 (used for ordering genotyping assays)

KASP Sequence:

CTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTYCAGAGMTTC[A/T]GTCTCCGCAGCGTCTGTCAGYTGGAGACCGGCCTYAGCAGACGACCARAG

Long Flanking Sequence:

CATCCCAAAAGATGGAGATCTGGAGCAGGATTTGCTGGAGCTCCAGGACCAGCACTTTCTGCAGCTCTCCACCAACCTCAGCAGACTCATACAAGGTTATTATAGAGCTGCATTTTAATATGAGTTCAGTAACACTTTAGTTTAGGTCACAATTCCTATCATTTACTACCTACTGGCTTATTACCTGCCTATCATTCAGATATTAACTGTGCAGGGTGTATTAGTAGCTAAAAACAGTACTATCTTATTCTGCATCTCTATTCCTATCCTAAACCGTCTTGTCACTCAGCCATCAACTCTGTCATCCATCAACTCTATTAACCATCAACTCTTCTGTCCTGATCTCAGAGCTGCGGGGCGAGCTGCGCCGGTCTGCGTTTGCTCTTCCAGAGGATCAGCAGGAGCTGCAGGATTTCCTCCATCAGCAGATCCTCCGGGCCGAGAGCAGATCTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTCCAGAGCTTC[A/T]GTCTCCGCAGCGTCTGTCAGCTGGAGACCGGCCTCAGCAGACGACCAGAGGAGGCAGAGCTCAGACCTGACCGCAGGAATGAGCTGAACGAGGCTCTAGAGGCGGCGCTACACCTGCTGAACCAGCCGGAGCCTGGAGACTCACAGACCAGGAGGATTTACTCTCCCAAACACTTCTCTGAAGGTCAGAGACACACAGAGATACTGATTTCTGAAGCGCTTTCAAAAATAACATACTGATGCAATGCGATATTTACTTATGTACCTATAGGACATTTTTGGCAGAGACTGATTTAGACAAAAAACGTTGACCAATACCATATATGACACCAACTTTAACCTTCAGCTGGTACCAATACCAATGTTAATGATAAAAAAAACAAAAAAACATTGACCAATATCAATGTAATGTAAATGCAAAACATTTTCCCATACAGATTTACAAAAAAAAAAGAAACTTAATCTGGTACTGATACCAATTTTAATAAAAAAAAAAAAAAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa11541

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000130358	Nonsense	44	412	1	7

Genomic Location (Zv9):

Chromosome 8 (position 704050)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	570650
GRCz11	8	636316

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GACGAGTTTATGGTTCTGCCCTTYCAGAGMTTCWGTCTCCGCAGCGTCTG[T/A]CAGYTGGAGACCGGCCTYAGCAGACGACCARAGRAGGCAGAGCTCAGACC

Long Flanking Sequence:

ATCTGGAGCAGGATTTGCTGGAGCTCCAGGACCAGCACTTTCTGCAGCTCTCCACCAACCTCAGCAGACTCATACAAGGTTATTATAGAGCTGCATTTTAATATGAGTTCAGTAACACTTTAGTTTAGGTCACAATTCCTATCATTTACTACCTACTGGCTTATTACCTGCCTATCATTCAGATATTAACTGTGCAGGGTGTATTAGTAGCTAAAAACAGTACTATCTTATTCTGCATCTCTATTCCTATCCTAAACCGTCTTGTCACTCAGCCATCAACTCTGTCATCCATCAACTCTATTAACCATCAACTCTTCTGTCCTGATCTCAGAGCTGCGGGGCGAGCTGCGCCGGTCTGCGTTTGCTCTTCCAGAGGATCAGCAGGAGCTGCAGGATTTCCTCCATCAGCAGATCCTCCGGGCCGAGAGCAGATCTGCAGACCGGCTGGAGGACGAGTTTATGGTTCTGCCCTTCCAGAGCTTCAGTCTCCGCAGCGTCTG[T/A]CAGCTGGAGACCGGCCTCAGCAGACGACCAGAGGAGGCAGAGCTCAGACCTGACCGCAGGAATGAGCTGAACGAGGCTCTAGAGGCGGCGCTACACCTGCTGAACCAGCCGGAGCCTGGAGACTCACAGACCAGGAGGATTTACTCTCCCAAACACTTCTCTGAAGGTCAGAGACACACAGAGATACTGATTTCTGAAGCGCTTTCAAAAATAACATACTGATGCAATGCGATATTTACTTATGTACCTATAGGACATTTTTGGCAGAGACTGATTTAGACAAAAAACGTTGACCAATACCATATATGACACCAACTTTAACCTTCAGCTGGTACCAATACCAATGTTAATGATAAAAAAAACAAAAAAACATTGACCAATATCAATGTAATGTAAATGCAAAACATTTTCCCATACAGATTTACAAAAAAAAAAGAAACTTAATCTGGTACTGATACCAATTTTAATAAAAAAAAAAAAAACTAACCGACAACAATACT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa8459

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000130358	Essential Splice Site	295	412	5	7

Genomic Location (Zv9):

Chromosome 8 (position 711067)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	577667
GRCz11	8	643333

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ATCCAGAACTCCTCTACGGCCAGCACGTTCCTCCTGCTCAACAGCAGATG[G/A]TAAGAGCTCTTAAAGTCACTGTCAGCAGCCATGCTTCCATCCAAAGATGT

Long Flanking Sequence:

TCAACTCCTGCCGCATCAACGCGCAACCAGGTAGAGAGATTTTAGAAGAGAAATTGAACCAATTTGCATGGCTTCAAAGCTTTGAATATTTGTTATAATATGAACACAATGAAGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGCGTGGGTTATCTGTAGTAAAGATGACAAATTGTTCCTCTTCCTAACAAGAATGCATGATATGCCGCCATGGCTTTGCTATCAATACATGTGATTATAATGGAAGTCAATGGGGCAAAAACAGCACCAACAGAACCAAACTTGAAAAATACACAAGGGTTATATGGGTTAAAGTCAGTGTGTTTCATGTGATCTCAGACTGTTGGAGGTCATGCACTGAACTCTTATTGGTGTGTTTGTGCGCTGTCGCAGGTCAGAAGGTTTTCTATCCAGTGATGTTCAGTCTGTATAATCCAGAACTCCTCTACGGCCAGCACGTTCCTCCTGCTCAACAGCAGATG[G/A]TAAGAGCTCTTAAAGTCACTGTCAGCAGCCATGCTTCCATCCAAAGATGTAAATTAGATGTAATATCGCATTAAACATTTGAGAATAAAGCCGAGCTTCCAAACAAGAGTAGTAAATCATCAGTTTCATGCACTGATATCGCTGAGAGGAGTGTAGTGTGCGGCACTGTTGGGATTCTCCACTGTGCTGTTTGTTCTCCCCTAATAATTGAGCTGCGCATAAAGAAGACCAAGACCAAACGCAATGAACGAGGAGGCTTCTGGAGACGTGAGACGAGAGCGCAGACTGATGATCAAGACAGCTCTGGAGGGAATAATAATAGGAGAAGAACACTGAAGCACTGTGATGACGGACTGACAGAGGGCTGAGGCCTTTTACTGCACTCTAAAATTATTGTTTTGACAAAACAAAACAAAATTAATGCAACAGCTTGCATTAATATATTCAAGTTACGACAGCATCTAACAAAATGAGGTTCAGACAACAAACTTTATTATGTT

Associated Phenotype:

Not determined