Busch Lab

ZMP

plrdgb

Ensembl ID:
ENSDARG00000089101
ZFIN ID:
ZDB-GENE-000406-3
Description:
PITP-less RdgB-like protein [Source:RefSeq peptide;Acc:NP_571650]
Human Orthologue:
PITPNM1
Human Description:
phosphatidylinositol transfer protein, membrane-associated 1 [Source:HGNC Symbol;Acc:9003]
Mouse Orthologue:
Pitpnm1
Mouse Description:
phosphatidylinositol transfer protein, membrane-associated 1 Gene [Source:MGI Symbol;Acc:MGI:1197524

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa43707 Nonsense Mutation detected in F1 DNA Not yet available
sa39344 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43707
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126531 Nonsense 410 543 12 14
ENSDART00000147718 None None 68 None 2
Genomic Location (Zv9):
Chromosome 21 (position 38686423)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 39826654
GRCz11 21 39850207
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTAATCTGTTTTACCCATCGGACCCCTCTGCCTCACGCCTGGAGCCAT[T/A]ATTGCACTCAGTTCTCACCCAGTTGCCTCCTTTTCCTGTTCCCCGGTACC
Long Flanking Sequence:
TCATGGGGGCACAAAGGACCTCTTGGATGACATCAGCATGATATAAAAAGCATTAATTGTGATGAATCATTAATTAGGAGTTAATAATTAATGAAGATAACTGGCTTTCCATGCATGCTGTCTCACAGTCTGTCTCAGGACGATCAGTGTGGCTCCAGGCAGGCTCTCAGTCCAGGCTGCTTTGAGTTTGAAGTATCAGACTGCTTTCTGCTGGGATGCCCACTGGGACTAGTGCTGGCGATGAGGAGAACGGTGGTCCCTGGCGTGGATGGTACAAATCGGCTTCTTTCTCACACACATACACAGATAAATTGTTAATTTTAAAATTAATATTCAAGTTGACCATATGATTTATAGTGTTTTTATTAGAGTAATTTCCTGATAGATGATTACTCTGTTCTGTCCTCCCTCTCTATTAGTGGCTCAGCTCAGGCCAGCTTGTTCGCAGATTTTTAATCTGTTTTACCCATCGGACCCCTCTGCCTCACGCCTGGAGCCAT[T/A]ATTGCACTCAGTTCTCACCCAGTTGCCTCCTTTTCCTGTTCCCCGGTACCAGCGCTGCCCTCTGGGTGATGGACGCTCCACTCTCATTGGTAAGAGCTTGCATCATACAGTAATACGGCTGTAAAATGTTGTTGGAGAGTTATTAGTTACCATTTGAATGTTTTGTTTTTTCAAACCAACCAAGCCTGCTTAATTTGTATGACTGCCTTACAGAAATCATAAAATGGGGCAAATATAACAGTGTATATAAAACATCTCATACACTACTGGTCAAAAGTTGGAGTCATTAGGATTGTTAAATGTTTTTAAAAATATATTATCCTGCTTAACATGGCTGAATTTATTTAATCAAAAATACAGTACAAACTGTAAAATTGTGAAATGTTATTACACTATATAATAAGTGTTCAAAAGTAGTTTATAAATTAATTTTATAATTTATTAGAGTGATTTTATTGATGAATTTTCAGCTTCATTACTCCAGTCTTCAGTCACAGGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39344
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000126531 Essential Splice Site 493 543 13 14
ENSDART00000147718 None None 68 None 2
Genomic Location (Zv9):
Chromosome 21 (position 38708833)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 39849064
GRCz11 21 39872617
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCGGCTCTGAGGGCACTGCCCCGAGCGAGCCTGTTAGCATCTCACAAGG[T/C]GAGTCTCCAGAGCACCAAATGTCCTTGAATCGGCTGCTTTCAGGCTCTTC
Long Flanking Sequence:
TGTTATGAATGATGAGTGATAAGTGCAGTATATTGTGAATCCATTTAATTTGCAATTCAACAAGTTGAAATTGTAATAGAAATTGATCTACTAGTTTGTTTCCTCTATGTAGGTCTTTAGCTTCTTCAGTTTTGTGTTGTTTGTGAATCTGTAAATCACTGCACGTTTAGTATGGCTTTTTTGTTTTGTTAATAAAGTTTTTGAAGCAACAAGATCTCCTAGTCATATGCAGTTTTTCATTTTCTTCTTATTGTCTATTGATATTTGAACTGTTTATTTATAGTTTTGCTTTCTCACATTTGTATAAATAAGTTTTCTTTTTTTTTCTTTCTCCTCAAAGTGGACACGGTGCTCAGACATGTGACAGAGGGTGGTGTTTCTGCAGATGGAGCAGCGGATCAGTGCTATGGAGGAAGTGTGTCTCGCAGAGGCAGTGATCGAGCTGTTCCACTCGGCTCTGAGGGCACTGCCCCGAGCGAGCCTGTTAGCATCTCACAAGG[T/C]GAGTCTCCAGAGCACCAAATGTCCTTGAATCGGCTGCTTTCAGGCTCTTCCTATGTTTTATTTATTTCCACACGGAAGTCAGAGTCTTTGATTGATACGGAGATGTTTGTGTGTGTTTCAGTGATGTGTAACATAAATCTTCTCTTTCTCTCTCAGTATGCAGTAGGTGGTGGGGTTCGAAGAGGTTAGATTATGTGCTGTATTGTCCAGATGTGCTCACTACATTTCCTACAATAGCTCTGCCTCACCTGTTTCACGCTTCATACTGGGAGTCCACAGATGCTGTGGCTTTTATTCTTAGACAGGTAAGAACAGATGCTCTTATGCTCTGCTTATACTTTACAACTTGGGCCATGATTAGTTTGTCTGAGACTAATTTTGGAAATCCTAAATTTCTTATAATACCAGGCTAAAATCTGTGTGATGATTAGTTTATAATGTTTACAGACAGATGATTTAATGGCTACTGTGATCTAATTTCCTTCCAATGAAATGTTGTT
Associated Phenotype:
Not determined