ZMP
si:dkey-211h10.5
Ensembl ID:
ZFIN ID:
Human Orthologue:
SYCP2
Human Description:
synaptonemal complex protein 2 [Source:HGNC Symbol;Acc:11490]
Mouse Orthologue:
Sycp2
Mouse Description:
synaptonemal complex protein 2 Gene [Source:MGI Symbol;Acc:MGI:1933281]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37635 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37635
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000128746 | Essential Splice Site | 242 | 330 | 7 | 11 |
| ENSDART00000144104 | Essential Splice Site | 907 | 995 | 22 | 26 |
The following transcripts of ENSDARG00000088950 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 12324796)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 12283598 |
| GRCz11 | 23 | 12218568 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTGAGCAGGATGATGTTGTTTTGAGAGGCATGGAGGAGGAATTGATGG[T/C]AAGGAGGGTGCTGACTTGTCAAATGGCCAGTAATAAGAATAATTATACAT
Long Flanking Sequence:
GGAGATGCGCTTTATCTGCCATCAGTTCAGCTCAGACCTTAAGAGCAAGATCAAGGTGCTTTTCATCTTTCTTTTCGCACTAAATCAGCACTGACTTAACACACCAGCCCCATCAAGCAACTGTTTGAGGATTCACTTCCTCTAATTAAAAAACTAAATCACTCAGTCACTGTATATTAGGCTTTTATAATAACTTGTTTTTGCTTCCATCAGAATCGGGGGAGGATGATGGACCTTTACACCAGTCAGTCTTTGAAGACCTTACAGCAGCACATGTCCTCTGTCCATGTAAAAGTACACCAGTACAGGTTAGACATGACCTTTTTCAAAGAAAAGTTTTTTGCTCTAAAACTGGTCTGATTTTCACCTGCTTTTCTTTCTTTATCTTACCTTCTATAGTTCTCAGAGGTTGGAGAAAGTTAAACAAGTCCTCTTGAGTGAAATTCAAAACCTTGAGCAGGATGATGTTGTTTTGAGAGGCATGGAGGAGGAATTGATGG[T/C]AAGGAGGGTGCTGACTTGTCAAATGGCCAGTAATAAGAATAATTATACATATTCATTTTCTATTAAATATGGAATAATTTGGGGAAATAATAATGGATTTAATTTTTAATTGTAATATATTTGTGTGTATTAAGTAATAGGTTTTGCATGTGCAGGATGATTATGTATTAGCCAGTAAATCATTACTGGAAATAAATAGAAGCATTTCTTCTTTAGTTGTTAGAAATTGTTTACATTTTTTACATAGTCCTTACTGGCCCTAAAACTATTCTGGTTGAACATTTACAGATTGTATAAATATGCAAATTAATAATGAAACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTAACTCATATTTTACTCAAAAAGTCCTAATAATCCACAAATGTAAAGAGACACTGAATTCAGCTGATTTGTGTACCGAATCTGCATGAACTACTTTA
Associated Phenotype:
Not determined