ZMP
NLRP6 (12 of 83)
Ensembl ID:
Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There is 1 allele of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa2001 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa2001
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000126054 | Essential Splice Site | 774 | 945 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 57076031)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 55859864 |
GRCz11 | 1 | 56529991 |
KASP Assay ID:
554-3219.1 (used for ordering genotyping assays)
KASP Sequence:
TGCTCCAACACAAGCTGRAGGATCCACACTATGCACTGCAGAAACTCAAG[T/A]ATGTGGAAGAATTWAAACRCTTCTCTCTGTTTRCGACTTACAGGATTGCT
Long Flanking Sequence:
TTATGTAAAGCACTTTGAATTGCCACTGTGTATGAAATGTGCTATATAAATAAACTTGCCTTGCCTTGCCTTGCCTTGCCTAATATGTAGTAATATCCAGGTTCTAAACTATCGGTGTCATGCAGATTTTAGCTTTAACCCTAATTAAACACACTAGAACAAGCTAATCAAGCTCTTGGTATACTTGAATCTGCCATACAGGTGCCTTGAGGCAAGTCAGAGCTAAACTCTGTAAAACCCTCCAGGACCAAGTTTGGTGAGCCCTGCTTTAAAATGACTCCTTGTTTGTGTGTGTGTGTGTGTGTGTGCGTGTGTTTGTGTGCAGGTTGTCTGGCTGTATGGTGACAGAGGAAGGCTGTGGTTTTCTCTCTTCAGCTCTGAGTTCAAACCCCTCACACCTGAGAGAGCTGGATCTGAGCTACAATCACCCTGGAGATTCAGGAGTCAAGCTGCTCCAACACAAGCTGAAGGATCCACACTATGCACTGCAGAAACTCAAG[T/A]ATGTGGAAGAATTTAAACACTTCTCTCTGTTTGCGACTTACAGGATTGCTTTACTTAGACTGTACTAGTACTAATTCTGTTGAACAATTAATTCAAAATAAAAGTTTGTATTTATGTATTGTGTGTGTAATCACTGTGTATAAATATTCTGTATATGTAAATAAAAAAAATGGATCAGATAAAAGAACCCTCCAAAAACATTTTATATAATATTCATTTATTCATTTCATTTTCGGCTTAGTCCCTTTATTAATCCGGGGTTGCCACAGCGGAATGAACCGCCAACTTATCCAGCAAGTTTTTTACACAACGGATGCCCTTCCAGCTGCAACCCATCTCTGGGAAACATCCACACACACATTCTCACACACACACACACATACACTACAGACAGTTTAGCCTACCCAATTCACCTGTACCGCATGTCTTTGGACTGTGGGGGAAACCGGAGCACCCGCGAAAGCAGGGACAACATGCAAACTCCATACATACATATATTA
Associated Phenotype:
Not determined