Busch Lab

ZMP

si:dkey-33i22.3

Ensembl ID:
ENSDARG00000088377
ZFIN ID:
ZDB-GENE-091204-67
Human Orthologue:
RP1L1
Human Description:
retinitis pigmentosa 1-like 1 [Source:HGNC Symbol;Acc:15946]
Mouse Orthologue:
Rp1l1
Mouse Description:
retinitis pigmentosa 1 homolog (human)-like 1 Gene [Source:MGI Symbol;Acc:MGI:2384303]

Alleles

There are 12 alleles of this gene:

Allele Name Consequence Status Availability
sa23667 Nonsense Available for shipment Available now
sa32286 Nonsense Available for shipment Available now
sa12624 Nonsense Available for shipment Available now
sa12633 Nonsense Available for shipment Available now
sa14900 Nonsense Available for shipment Available now
sa23668 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23667
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 539 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19210444)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19238701
GRCz11 20 19138284
KASP Assay ID:
2261-4130.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAAGTAGAGGAAGATGAGAGGTCTATATCTGTCTTGAGCTCTTCCTCA[C/T]AAATTCTAGCATCACTGAAGGAGGATCAAGATGATGACGTCAACCCCACT
Long Flanking Sequence:
AAAGACATTTTGAAGAGTCACACTGTCAGCACTGCTGTGCTCGCTGTCAGGAATATGACATCTGGAAGAATCCTGTACCTCCCAGTCAAGGAGCTGTAAGACGCATCAGATCCTCAAGCTCAAGTGCATCCTCAAGAAGAATAGTGTGCAAAAAGGCATCTACTGACAGCATTCGCACAGTGTCCAGTGAGGAGTACACAGAGCATGTAGTGGAAAAGGCAACTTGCATTCAACAGACCTTCGGACAGCAAGTAGATACAACAATTGAACAGTGTACCATCAACCATTGCTGCAGTCGAAGTGAAGTATCCTCAATATCCCCTAAACCAAAGAGCACAAGTACTGTAGATGATAGGTGTGAGAACATTCATGCATCTGATAATGAAGAGAACAGACCTGATGTAATTTCCTCCAACCTCCCTAAAGATCATTTAAGTGTTCAGATCACTCAGCAAGTAGAGGAAGATGAGAGGTCTATATCTGTCTTGAGCTCTTCCTCA[C/T]AAATTCTAGCATCACTGAAGGAGGATCAAGATGATGACGTCAACCCCACTATCTCGAGAGCATCCCATGACCAACAGGATGATGAGGAGAGCAAAGATCCTGAAACAAACCAATGTTCTGCTTCACCCTGTAAATCTCCTGCATCTCTGAGGCATCTGTCACCAAGACCACCGAGCAAGGCTTCATCTTCAGGGCGGTCTAAAACTTACAGAAAGTTTGCCAGTCCTGAAGTTGGCACTGAAGAGGTCAGGTCTGAAGCATCTGCTTCCCCCAACATTTTGTCTGGACCCAAAACCTGTAAATGTGTAGTGACAAAGGACACTCCAGAAGCTTCTGAAACAAATGATGAGGTAGAAGACATGCAAGTTTCAGTAACTGAGGAAAGGGCACTAAGTGCAACTTCTACAAAGTCTCTGTCTGAGTTATCAACCTCGTGTGAGAATGGAAATCCTGCTGAAATAATACCAGAGAAGCGATCATTAAGTGCTCTCTCTATAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32286
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 2587 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19216588)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19244845
GRCz11 20 19144428
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCA[A/T]AAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAAC
Long Flanking Sequence:
GTGACCCAAAAAACAAGAAGGAGACATCAGAAGAGAAAGGCAAACATCTGGATGAGGAATTGAAAGCCAGATCATCCTCAGGTGTAGATGTTAACAGTGGCTCGACAGGTTCTGGGAAAAGCAGTGTCAATGATGGCACCCAAGTCCAACCTAACACTGATTGTGAAGGCTTGGATACCCTGACAAAGGTACAGGAAGTTGAAGAAACAGTAGAAGAAGAAACTTCAAAAACACCAGAGTCAAAAAATGATTCAGCCACTCCAGATGTAGCAAATCAAACTCAGATGACACCAGACAAAAATGTAGAGAAGCTAAAAGATGATGTTCCAGGCTCTGATGAGACAATCAGGAGTTATGATAGCCCAAGGGAACTCATTGAAACCCCTCTTTCATCAAACAAAAGTTCTGGGAATAATCCCAAAACGGAAGAACCCCAATCAGACCATCAAGAGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCA[A/T]AAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAACAAATTAGAAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12624
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 2773 3919 3 3
ENSDART00000138888 None None 81 None 2
ENSDART00000122595 Nonsense 2773 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19217146)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19245403
GRCz11 20 19144986
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATACTCCAGWTAAAAAAATYGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGKG
Long Flanking Sequence:
AAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAAAAGTGAGGAGGGTGATGAGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTTGTGGATGATGATGATGATGATGATGATGGGGAAATTGATAAGTTGTCTTATGACTCAATGACTGCACAACATCAGGCAGCAGAACAAGATGAAGATCAAGAGGAAGATGGGATCGATTCTGCTGGACAAGATAAGATAACTGAAGATGAAACAGGAGAATTAAGTGAGAAAGATAATGATGACATTGCAGAAGTATCTGAGAAGGCTGAAAGTGAAACTGCAGAAGATAGACAACCTGCAAAAGATGAAACTGATGAAGGTGACTCAGTTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12633
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 2773 3919 3 3
ENSDART00000138888 None None 81 None 2
ENSDART00000122595 Nonsense 2773 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19217146)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19245403
GRCz11 20 19144986
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATACTCCAGWTAAAAAAATYGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGKG
Long Flanking Sequence:
AAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAAAAGTGAGGAGGGTGATGAGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTTGTGGATGATGATGATGATGATGATGATGGGGAAATTGATAAGTTGTCTTATGACTCAATGACTGCACAACATCAGGCAGCAGAACAAGATGAAGATCAAGAGGAAGATGGGATCGATTCTGCTGGACAAGATAAGATAACTGAAGATGAAACAGGAGAATTAAGTGAGAAAGATAATGATGACATTGCAGAAGTATCTGAGAAGGCTGAAAGTGAAACTGCAGAAGATAGACAACCTGCAAAAGATGAAACTGATGAAGGTGACTCAGTTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14900
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 3252 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19218583)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19246840
GRCz11 20 19146423
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGATCAAACTTCACATGATGGACAAACTGCTGAAGGTGAAACTGCAAAG[G/T]AAAGTGAAACAGTTGAAGATGAAACTGCAGAAGGTGTACACACTGCTGAA
Long Flanking Sequence:
ATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGATGAAGAAACTGCAGAAGATAAACACTTTACTGAAGATGAAACTGCTGAAGAAATTGAAAATTTTGAAGTTAAAACTTCTGATGATGGACAAAACGCTGAAGATAAAACTTCAGATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGAAGATGAAACTGCAGAAGATGGAAAAATTACTGAAGATGAAAAAGCAGAAGAAATTAAAAATTTTGAAGACAAAACTTCAGAGGATGGACAAACTGTTGAAGATAAAACTTCAGATGACGGACAAACTGCTGAAGACAAAACATCAGAGGATGGACAAACTGCTGATGAAGACACTGCAGAAGATGAACACCTTACTGTAGATGAAGAAACTGCAGAAGAAATTGAAAAATTTGAAGATCAAACTTCACATGATGGACAAACTGCTGAAGGTGAAACTGCAAAG[G/T]AAAGTGAAACAGTTGAAGATGAAACTGCAGAAGGTGTACACACTGCTGAAGGTGAAACTGCAGAAAAATGTGAAACCCCTGAAAATCAAACTTTGGAAGATGGTCAGATAGCTGAAGATGAAATTGCAGACCAAGGTGAATCAGTAAATGGTGACACTGCAGAAGACCAGGAAATGGCTGAAAACAAAACTGTGGAAGATCAAGAAACTGCTGAAGATGAAACTACAGACGATAAAACTACAGAAGATGGACAAACTGCTGAAGATAAAACTTCAGAAGATGGACAAACTGCTGAAGATAAAACTTCCGAAGATAAAAATTCAGAAGACGGACAAACTGCTGAAGATGAAACTGCTGATGATAAAAATTCAGAAGATGGACAAACTGCTGAAGATGAAACTGCTGATGATAAAACTTCAGATGATGGACAAAGTGCTGAAGATGGAGATGCAGAAGACATACAGACCACTGAAGATGATGCTGCACTGAAAGGTGCAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23668
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122595 Nonsense 3578 3919 3 3
ENSDART00000138888 None None 81 None 2
Genomic Location (Zv9):
Chromosome 20 (position 19219561)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 19247818
GRCz11 20 19147401
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACTTCTGAAGCAGAATCAGAAGATGAAGGAACCACCAATGCAGAATCT[G/T]AAATGCATGAAGGGAAAGCTACTGAAGATGGATCAACAGAACAAGATGAG
Long Flanking Sequence:
ATGCTGCACTGAAAGGTGCAACAGTTGAAGATAAAATATACGAAAATAAAATTGCTATAAAAGATGAAACAACTGAGGATGGAACTGCAGACGAGTGTGAAACATCTTCTAAAATTGAGTCTGTAGAAGATGAAGAGATAGCTGAAGCTGAAAGTGTAGAAGAGAGCAACAGAAGCAATGATGAAACTGCAGAAAATGGTGAGACAGCTAACAACAATAACAACAACAATGCAGAAGATACGCAGACTGATGAAGCTGACACTGCAGAAGAGAGTGATACAGGTTATGAGGACACCACAAAAGACAGTGAGACGGCTGAAGATGAAACTGCTGAGGGGACATCAGCTGAAGAAAGAGGAACTGAGGAACAAAGAGCAGATGATGATGATGAGACTGGAGAAAACACTGATGATGTTGACAATACAGGAGATGTCTCAGCTGAGGAAAAGGAGACTTCTGAAGCAGAATCAGAAGATGAAGGAACCACCAATGCAGAATCT[G/T]AAATGCATGAAGGGAAAGCTACTGAAGATGGATCAACAGAACAAGATGAGAATGCTGAGATAGAGCCATCAGAGCAAACTCCTGATCATGAAACAACTGCAGAAGACACTGACAGGAGTCAAACAGAGGGTGAAGATGAGGACACTGTCAGTTGTGAAGCAGCAGATGTTCTTTCTAACATTGAGGACACAGAGAGTCAAGATGTTTCAACTAATCTTGAGGTTGTTGATGGAGATGAAGAAAGTGATAAAGAAGAAAACGACTTGGCAAAAAAAGCTGGTCTTGTTTTCAATAATGGCGAATCAGCTGAAGCTGGTGACGAAGCTGAGGATGAAACTGAACCAGATATGGAGACAGATGAAGGGGAACGTGATGGGAACACTCCAAATTTACAGCCCATGTTACAGCCAAAGCAAAAAGATGGCAAACCAGATGGAGCAGCTTCATTAAATGTTTTGATAAACCACAACTCTGAGTCTGAGGATGGTGCATATGCTGAT
Associated Phenotype:
Not determined