ZMP
LOC561000
Ensembl ID:
Human Orthologue:
LTBR
Human Description:
lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:6718]
Mouse Orthologue:
Ltbr
Mouse Description:
lymphotoxin B receptor Gene [Source:MGI Symbol;Acc:MGI:104875]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42762 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa44855 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42762
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000121533 | Essential Splice Site | 11 | 299 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 16 (position 34198800)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 31736770 |
GRCz11 | 16 | 31691437 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGACCACGGCAAGATGGGAGACGATAAATGCCAAAAATGTCCGAAAG[G/A]TGAGATTTTCATATCATTTCTGTACAAAAGAACGATTTGAGAAGACCTGG
Long Flanking Sequence:
GTGTTGACTTTTTATTCTCTTTGTCTCAGGGGTTTAATGCAGTGCAAAACAGGAAGTAAGAACTCTATGCAAGCTCAAGTGCAGAGAGGGTGGATGGGGCTTTCCGATGCAGAGGGTAGAAAAAGAGCAATAGAGGGGGTTTAGAGTGGGTGACGTAAAACAGCAATCGAGGGGAAAGAAAAAAATTGTTCCCCTGCCTGCAGCAGATGAACTGAGATGTAACTACTAAAAGACAGAGAGAACAAAAGTGACAGAGAAACCGAAGAGACAGAAGAAAGACAACTGACGCAATCGTGTGGGCCAGTGTGACTACATCAAATTCCCAATAACATAAACAGAAGGATCGAGACATCACGTCAAGCTTAAAGTGACCATGATTGGTGTGTAAGCCAACAGACCTTGTATGACTGCACAAAACTCTTCACACTGAACGCATCGAACTGAGACAACTTTTGACCACGGCAAGATGGGAGACGATAAATGCCAAAAATGTCCGAAAG[G/A]TGAGATTTTCATATCATTTCTGTACAAAAGAACGATTTGAGAAGACCTGGGATTTCTGTTTAAATCATTAGCAACTTAGAAATACTTACACTCTTTTCACTATTGTGTGACAAATGTCAGTTTTTAAATTCCAATCTGTCTCATTCCTATGTTGTATGTCCCAAATTACAGAGTTTCTGGAAGAAAATATTCCAGTTTTTTTTTTTTTTCAGATACATTAGACATTATGATTAAACCAGATCCTATATTAATTATATTTGAAGTTTCCGAAAAATTTATGAGACGCAAACAGTTTCAACAACAGTTTGTTTCATATGGGTTGATCTGTAACAAAAAATTATCCTTTTGTTTTGGAAAAGAAGTTCCAACTTTTAAATAATATTCGACAGAGCCCTATAGACAAGGTTTTGTTATTTGAAAAAATTGGTCCCCTTTTATTTCCTTTCTACAAACTTGTGATTAATATGTTTACTATTCCTTCAGTACCTACTTTTACTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44855
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000121533 | Essential Splice Site | 53 | 299 | 2 | 8 |
Genomic Location (Zv9):
Chromosome 16 (position 34201110)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 31739080 |
GRCz11 | 16 | 31693747 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTGGAAAACAGGATGACCGAGTGTCGACCCTGCAGAAAGTGCACCAGCG[G/A]TAATTTCACATTCATTTACTCTTATTATGATTTACTTGACATTATGCATT
Long Flanking Sequence:
AATATATTTCGCAAATACATGCTAAAGTTGCTTCATTAAAGAGATAGTTCATCATTTACTCTCCCATTACTTCTCACAAACCTGTTAACACAAAGCAAGGTATTCTGAAGAAAGCTAGAAACCGGTAACTGTTGACTTTCATAGTATTTGTTCTTTCTTCTATGGATGTCACTCCCAGTTTTCAGCTTTCTTCAAAATATCTTCCTTTCTTTGTGTTTAAAAGAATAATGAAACTAATAAAGTTATGGAGGGTGAGTAAATTGTGAGTATTTATTTTGTTTTGGGTGAACTATCCCTTTAAATAATAAAAAAAACAGATTTTTAAAAGGTTTAAAAATATATATTTTAATAACTTTGCTCTCTTCCTTTTTTAGGAAAATTTATGCGTGCCAGATGTAACTCATCACAAAGTACAGTGTGCGAAACCTGCCCTCATGATCAATTTATTGACGTGGAAAACAGGATGACCGAGTGTCGACCCTGCAGAAAGTGCACCAGCG[G/A]TAATTTCACATTCATTTACTCTTATTATGATTTACTTGACATTATGCATTTAACCTCACATGTGTCTTTCAGGGAGTAATGTTTGTGCGTGTGTTTAACAGGCAGCCATCTGGTGGTGCAAAAGGAGTGTCAGGCAGACAAAAACACCCAGTGCAAGTGTGAATCAGGATACTACTGTAAACACCTAAGCGATAATGATAACGATTCCTACTGTGATCATTGCACTTCAATCTCCACCTGTCCTCTGGGGCAAGGGGTCGCTATTCAGCGTAAGTTTTTTAACGTTTTTATTAATGTGATCCAAATATAACCATTCGTTTATGAAAAACCCATATTTTAAAAAGTGACTATTGTAAATAAAAGTGTTAACATATTATAGATGAAACTACAGTATATTCAAATCTGCACTTTTAAAATTATTTAGTATTTTAGTAATATATTTAACTCTTACAATAGAAAAAATTGAGGGACCAGAATTTATTTATTTTGTCTTGATTTAC
Associated Phenotype:
Not determined