Busch Lab

ZMP

LOC561000

Ensembl ID:
ENSDARG00000088018
Human Orthologue:
LTBR
Human Description:
lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:6718]
Mouse Orthologue:
Ltbr
Mouse Description:
lymphotoxin B receptor Gene [Source:MGI Symbol;Acc:MGI:104875]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa42762 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa44855 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa42762
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000121533 Essential Splice Site 11 299 1 8
Genomic Location (Zv9):
Chromosome 16 (position 34198800)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 31736770
GRCz11 16 31691437
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGACCACGGCAAGATGGGAGACGATAAATGCCAAAAATGTCCGAAAG[G/A]TGAGATTTTCATATCATTTCTGTACAAAAGAACGATTTGAGAAGACCTGG
Long Flanking Sequence:
GTGTTGACTTTTTATTCTCTTTGTCTCAGGGGTTTAATGCAGTGCAAAACAGGAAGTAAGAACTCTATGCAAGCTCAAGTGCAGAGAGGGTGGATGGGGCTTTCCGATGCAGAGGGTAGAAAAAGAGCAATAGAGGGGGTTTAGAGTGGGTGACGTAAAACAGCAATCGAGGGGAAAGAAAAAAATTGTTCCCCTGCCTGCAGCAGATGAACTGAGATGTAACTACTAAAAGACAGAGAGAACAAAAGTGACAGAGAAACCGAAGAGACAGAAGAAAGACAACTGACGCAATCGTGTGGGCCAGTGTGACTACATCAAATTCCCAATAACATAAACAGAAGGATCGAGACATCACGTCAAGCTTAAAGTGACCATGATTGGTGTGTAAGCCAACAGACCTTGTATGACTGCACAAAACTCTTCACACTGAACGCATCGAACTGAGACAACTTTTGACCACGGCAAGATGGGAGACGATAAATGCCAAAAATGTCCGAAAG[G/A]TGAGATTTTCATATCATTTCTGTACAAAAGAACGATTTGAGAAGACCTGGGATTTCTGTTTAAATCATTAGCAACTTAGAAATACTTACACTCTTTTCACTATTGTGTGACAAATGTCAGTTTTTAAATTCCAATCTGTCTCATTCCTATGTTGTATGTCCCAAATTACAGAGTTTCTGGAAGAAAATATTCCAGTTTTTTTTTTTTTTCAGATACATTAGACATTATGATTAAACCAGATCCTATATTAATTATATTTGAAGTTTCCGAAAAATTTATGAGACGCAAACAGTTTCAACAACAGTTTGTTTCATATGGGTTGATCTGTAACAAAAAATTATCCTTTTGTTTTGGAAAAGAAGTTCCAACTTTTAAATAATATTCGACAGAGCCCTATAGACAAGGTTTTGTTATTTGAAAAAATTGGTCCCCTTTTATTTCCTTTCTACAAACTTGTGATTAATATGTTTACTATTCCTTCAGTACCTACTTTTACTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44855
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000121533 Essential Splice Site 53 299 2 8
Genomic Location (Zv9):
Chromosome 16 (position 34201110)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 31739080
GRCz11 16 31693747
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTGGAAAACAGGATGACCGAGTGTCGACCCTGCAGAAAGTGCACCAGCG[G/A]TAATTTCACATTCATTTACTCTTATTATGATTTACTTGACATTATGCATT
Long Flanking Sequence:
AATATATTTCGCAAATACATGCTAAAGTTGCTTCATTAAAGAGATAGTTCATCATTTACTCTCCCATTACTTCTCACAAACCTGTTAACACAAAGCAAGGTATTCTGAAGAAAGCTAGAAACCGGTAACTGTTGACTTTCATAGTATTTGTTCTTTCTTCTATGGATGTCACTCCCAGTTTTCAGCTTTCTTCAAAATATCTTCCTTTCTTTGTGTTTAAAAGAATAATGAAACTAATAAAGTTATGGAGGGTGAGTAAATTGTGAGTATTTATTTTGTTTTGGGTGAACTATCCCTTTAAATAATAAAAAAAACAGATTTTTAAAAGGTTTAAAAATATATATTTTAATAACTTTGCTCTCTTCCTTTTTTAGGAAAATTTATGCGTGCCAGATGTAACTCATCACAAAGTACAGTGTGCGAAACCTGCCCTCATGATCAATTTATTGACGTGGAAAACAGGATGACCGAGTGTCGACCCTGCAGAAAGTGCACCAGCG[G/A]TAATTTCACATTCATTTACTCTTATTATGATTTACTTGACATTATGCATTTAACCTCACATGTGTCTTTCAGGGAGTAATGTTTGTGCGTGTGTTTAACAGGCAGCCATCTGGTGGTGCAAAAGGAGTGTCAGGCAGACAAAAACACCCAGTGCAAGTGTGAATCAGGATACTACTGTAAACACCTAAGCGATAATGATAACGATTCCTACTGTGATCATTGCACTTCAATCTCCACCTGTCCTCTGGGGCAAGGGGTCGCTATTCAGCGTAAGTTTTTTAACGTTTTTATTAATGTGATCCAAATATAACCATTCGTTTATGAAAAACCCATATTTTAAAAAGTGACTATTGTAAATAAAAGTGTTAACATATTATAGATGAAACTACAGTATATTCAAATCTGCACTTTTAAAATTATTTAGTATTTTAGTAATATATTTAACTCTTACAATAGAAAAAATTGAGGGACCAGAATTTATTTATTTTGTCTTGATTTAC
Associated Phenotype:
Not determined