ZMP
pabpn1l
Ensembl ID:
ZFIN ID:
Human Orthologue:
PABPN1L
Human Description:
poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:HGNC Symbol;Acc:37237]
Mouse Orthologue:
Pabpn1l
Mouse Description:
poly(A)binding protein nuclear 1-like Gene [Source:MGI Symbol;Acc:MGI:2685954]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa41038 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa41038
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000125275 | Essential Splice Site | 44 | 163 | 3 | 6 |
| ENSDART00000131923 | Essential Splice Site | 44 | 163 | 4 | 7 |
| ENSDART00000135304 | Essential Splice Site | 73 | 192 | 4 | 7 |
| ENSDART00000147792 | Essential Splice Site | 44 | 162 | 4 | 7 |
Genomic Location (Zv9):
Chromosome 7 (position 56905586)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 55340912 |
| GRCz11 | 7 | 55642323 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGTTGTATGGTTTGCGGTGTATGTTTATGGACTATTGGTTGCTTTGCA[G/A]GTGGATTATGGAGCAACTGCAGACGAATTGGAGATGTACTTTAATAGCTG
Long Flanking Sequence:
ACCTTTTGGTTGACCTTTTCTTATGGGGTTTTATTTGCAGTGTTTATTTTTCCAAATAGCTGTAATAAAAATGCTAGAATTTACTTTTGAATTAACAACCATTTTTAAACTAGTTTTAAACCCAACACAAGTAGCTGCTTTTGAATTTTTAGCTTAACCTTACAGTGACTGAATTATATAGGAAAACCCAGCACTAATGCTATTTTTATACCATCATATTTTACACTGCATGAAGTTCATTCAAATACTGCTTTAATATTTTATATGGTTATAATTAACTTTATATTATCTTCTCTTTCCTCAGAATTGTTCTTCGACATGACCCATGAAGAGAGAATAGATTCTGATAGGAGATCTATCTATGTGGGGAACGTAAGCTGCTTCTGTCTTTTTTTTTATATTACAAATAAGCATTACAAATAGTTAACTTTTGCATTTGTTATTTAATCATGTGTTGTATGGTTTGCGGTGTATGTTTATGGACTATTGGTTGCTTTGCA[G/A]GTGGATTATGGAGCAACTGCAGACGAATTGGAGATGTACTTTAATAGCTGCGGTCACGTTAACAGAGTTACAATCCCGTATAACAGATTCACAGGCCATCCAAAAGGGTAAAAAACTTAAACTTAACATCAAACACAGGGTTCCCACACTGCTTGAAAGTACTTTAATTTAGATTCAAGGCCTGGAAAGTACTTAAAAACAAACTTGGGTCCTTAAAAGTGCTTGAATTATGGAAATTATGTGAAATTTTTGTTTTTAAATAAAATCATATTTCTGAATTTTCTACATTTTAATATTACCAGTTTTAAATTCAACTAATTTTATTAAACATTTATTTTTAAATGTTCATTTTCAACAGTGTAGGTGAAATGTTAAGTAAAGTCTTTTCATGGTGCTAGCAGCGTGATTTCACAAGGGGAAACAACCATTTTACGTTTTATCGTTTTAGTGGCTAATTCCTACGAATTCGAGTTCAGTCATATGAAAAATATACAATTTTA
Associated Phenotype:
Not determined