ZMP

LOC100331942

Ensembl ID:

ENSDARG00000087392

Human Orthologue:

RGAG1

Human Description:

retrotransposon gag domain containing 1 [Source:HGNC Symbol;Acc:29245]

Mouse Orthologue:

Rgag1

Mouse Description:

retrotransposon gag domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2685231]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa24414	Nonsense	Available for shipment	Available now
sa30006	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa24414

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000123007	Nonsense	1139	2048	3	3

Genomic Location (Zv9):

Chromosome 23 (position 44686027)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	44753476
GRCz11	23	44569996

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCCAGCCAACTGAGAAGCTGACTGAATCCGGGTCCCTCACTGTGGTGCTT[C/T]AACCCCAGCAAACTGAGAAGCTGACTGAATCTGGTTCGCTCACTGTGGTG

Long Flanking Sequence:

TGACTGAATCTGGTTCCCTCACAGTTGTATCCAACCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCTCTCACTGTGGTGCTTGGACCACAGCCAACTGAGAAGCTAACAGAATCTGGTTCCCTCACAGTTGTATCCAACCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTCACATGTGTATCCTACCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCTCTCACTGTGGTGCTTGGACCACAGCCAACTGAGAAGCTAACAGAATCTGGTTCCCTCACAGTTGTATCCAACCTCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTTACTGTGAAGTCAAGCGCACTGTCTGCTGCTTGTCCTGTCTCTGTGGCATCCAGCCCTCTCCCTACAGAAAAACTGAACCACTCTGTTTCTCTCACTTTGTCTAGCCCCCAGCCAACTGAGAAGCTGACTGAATCCGGGTCCCTCACTGTGGTGCTT[C/T]AACCCCAGCAAACTGAGAAGCTGACTGAATCTGGTTCGCTCACTGTGGTGCTCGGACCCCAGCAAACTGAGAAGCTGACAGAATCTGGTTCGCTCACTGTGGTGCTCGGACCCCAGCCAACTGAGAAGCTGGCTGAATCTGGTTCCCTCACTGTGGCGCTTGGCCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTCACTGTGGCGCTTGGGCCTCAGCCAAGTGAGAAGCTGGCTGAATCTGGTTCCCTCACTGTGGCGCTTGGTCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTCACTATGGCGGTTGGGCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTCACTGTGGCGCTTGGCCCCCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCCTCACTGTGGCGCTTGGGCCTCAGCCAACTGAGAAGCTGGCTGAATCTGGTTCCCTCACTGTGGCGCTTGGCCCCCAGCCAACT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa30006

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000123007	Nonsense	2016	2048	3	3

Genomic Location (Zv9):

Chromosome 23 (position 44683396)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	44750845
GRCz11	23	44567365

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATTTTCCTGTCAAGTCCAAGTCTGGCTCTCACCATCCTCATGCATTTTGG[A/T]AGAAGGTAAAGTCTAGATTTCACCCCAATGACAAGTCAGCTCAGCGTTTA

Long Flanking Sequence:

CTGAATCTGGTTCCCTCACTGTGGCGCTTGGCCCTCAGCCAACTGAGAAGCTGACTGAATCTGGTTCCTTGTTTGTGGTGTCCAGCCCACTGTCTACTGGGAAGCTTGCGGAGTCTGGGTCACTTGTGCTGTCTGGCCCTCTACCAACTGACAAGTCAACTGAAACTGCTTCCTCGGTGTCTAGCCCACCTGCTACTGGGAAGCTGACTGAATCTGGTTCTCTTTCTGTGGTTTCTAGCCCACTCACTACTGGGAAGCTCACAGAGTCTAGTTCCTTTGTATTGTCTGGCTCTCTCCCTGCTGAGAAACTAACTGAATCTGGGTATTTCTCTGTGGTGTCCAGCCCACCTAATACCGGAGAACTGACTGAATCTGGCTCTCTGTATTTGGTATCCAACCCACTCACTACTGGAAAGATGACTGAATCTGGTTCATTTGAAATTTCTGGCCATTTTCCTGTCAAGTCCAAGTCTGGCTCTCACCATCCTCATGCATTTTGG[A/T]AGAAGGTAAAGTCTAGATTTCACCCCAATGACAAGTCAGCTCAGCGTTTAATTGCTTGCTTGAAGAAAAAAGGGTGTGCTTTTAAACGTGTGCATTTCTAAATTTGTTTCTCTAAATGTATATTTTTAATAAACTTGGCTACTTGCTGGAACTGAGTTTGGTTGTGTTTTTATTTTTTCTCTTCTCTCCCCTCAATCCTTTGACTTGTTCCTCATGCTTTGCAAAGCACATTTAAGATATGATCGGTGTAAGTTTCAGTTTGCTACTAAAGTGTCACCTAATAAATATCAAATTAAGAAAGGAACTTAGTATGCTAACAGTTGTGTAAATCAGTATACAAATTACAGCTGACAAGCCTACCTTTTTGGTTGGGCTGTAAGTAAAGCAGTCGAACTTGCAGTGTTAAATAAAATTATATATATATATTTTTTTATTATTAAAAGAAATTCTAATTAAGGTTTTATACAAGCCTCAAAGTAAAGTTTCTAGTCTCACTAAAT

Associated Phenotype:

Not determined