ZMP

sb:cb1008

Ensembl ID:

ENSDARG00000086559

ZFIN ID:

ZDB-GENE-031204-9

Human Orthologues:

CUX1, CUX2

Human Descriptions:

cut-like homeobox 1 [Source:HGNC Symbol;Acc:2557]
cut-like homeobox 2 [Source:HGNC Symbol;Acc:19347]

Mouse Orthologues:

Cux1, Cux2

Mouse Descriptions:

cut-like homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:88568]
cut-like homeobox 2 Gene [Source:MGI Symbol;Acc:MGI:107321]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa33516	Nonsense	Mutation detected in F1 DNA	Not yet available
sa45182	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa33516

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000128728	Nonsense	28	643	2	11

Genomic Location (Zv9):

Chromosome 5 (position 722668)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	KN150702.1	158980
GRCz11	5	1577280

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCAGCTCTGATGGACTGGAGAAAATATTCATTCGCAGAGATCAAGAAGTT[C/T]AGCGTCTGGAACAGGAAGTGCAGAGACTTCAGCGGCGGTTGCAGGAAGTG

Long Flanking Sequence:

GGATGGAGGGATGGATTGACTGATTGATTGTATGGATAGATGGACAAATTGATTGGAGGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGCAGAAGGATGGAGGGATGGATAGACTGATTGATTGTATGGATAGATGAATGGACAGATTGATTGGATGGATAGATGGGCAGAAGGATGGAGAGACGGATAGATGGATAGATTGATTGATTGTATGGATGGATAGGTAGATGGACAGATTGATTGGAGGGGTGGGTAGGTGGATGGGCGTTTTAACCCACCACTGGGTCAAATGTAAACAAACCTAAATAAATATACACAGCACTGTTTACTTCTATTTACACCATATTCACTATATCCAAGACTAAAAGTCTCCCTGTTGGGCTTTAATCGACAGCAGATCATCATGAAGCGTCTCCTGGACTTCAGCTCTGATGGACTGGAGAAAATATTCATTCGCAGAGATCAAGAAGTT[C/T]AGCGTCTGGAACAGGAAGTGCAGAGACTTCAGCGGCGGTTGCAGGAAGTGCAGGAGAAAACAGCCAATCACATTGCGCTGCTGCAGCAGCAACTAGCCAATAAGACACAAGATGTAGAGGTAGGCACATTTGATGATTATTAGTGATCATTAAAGTCCGGCCTGAACCGGAAGTTGCTCAGACTGTTATTTCAGCATGCTGATGTGCTTCCAACTGAAACTGAATATTGAGTAGGGGGCGGAGCTTTCTTTTTTGCATCATTCCCTCATCGCAAACTGAAAGGTGCAGTATGTAAGATTGACACCCAGTGGTTTAACTAGGTATTGCACACCAAAATCGAAACACTTTTTCACTCCGACTCCTCCGATGCAAATGCAGGTTGCCAGATTGACAACTCCTACACGTATCGTATACTAGTTACAAGCGACGACGTGATAAAAGATATATTTTCCATATTAAAACGTGTTTTTGACCTACCATCACCTGAAATTTTTATTTTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45182

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000128728	Nonsense	45	643	2	11

Genomic Location (Zv9):

Chromosome 5 (position 722719)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	KN150702.1	159031
GRCz11	5	1577229

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCGTCTGGAACAGGAAGTGCAGAGACTTCAGCGGCGGTTGCAGGAAGTG[C/T]AGGAGAAAACAGCCAATCACATTGCGCTGCTGCAGCAGCAACTAGCCAAT

Long Flanking Sequence:

ATTGGAGGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGCAGAAGGATGGAGGGATGGATAGACTGATTGATTGTATGGATAGATGAATGGACAGATTGATTGGATGGATAGATGGGCAGAAGGATGGAGAGACGGATAGATGGATAGATTGATTGATTGTATGGATGGATAGGTAGATGGACAGATTGATTGGAGGGGTGGGTAGGTGGATGGGCGTTTTAACCCACCACTGGGTCAAATGTAAACAAACCTAAATAAATATACACAGCACTGTTTACTTCTATTTACACCATATTCACTATATCCAAGACTAAAAGTCTCCCTGTTGGGCTTTAATCGACAGCAGATCATCATGAAGCGTCTCCTGGACTTCAGCTCTGATGGACTGGAGAAAATATTCATTCGCAGAGATCAAGAAGTTCAGCGTCTGGAACAGGAAGTGCAGAGACTTCAGCGGCGGTTGCAGGAAGTG[C/T]AGGAGAAAACAGCCAATCACATTGCGCTGCTGCAGCAGCAACTAGCCAATAAGACACAAGATGTAGAGGTAGGCACATTTGATGATTATTAGTGATCATTAAAGTCCGGCCTGAACCGGAAGTTGCTCAGACTGTTATTTCAGCATGCTGATGTGCTTCCAACTGAAACTGAATATTGAGTAGGGGGCGGAGCTTTCTTTTTTGCATCATTCCCTCATCGCAAACTGAAAGGTGCAGTATGTAAGATTGACACCCAGTGGTTTAACTAGGTATTGCACACCAAAATCGAAACACTTTTTCACTCCGACTCCTCCGATGCAAATGCAGGTTGCCAGATTGACAACTCCTACACGTATCGTATACTAGTTACAAGCGACGACGTGATAAAAGATATATTTTCCATATTAAAACGTGTTTTTGACCTACCATCACCTGAAATTTTTATTTTAAAAAGTTTCAATTTGTCACGGCTGAATAACAGAAATTTCTATGACAATTAT

Associated Phenotype:

Not determined