ZMP
arid1aa
Ensembl ID:
ZFIN ID:
Human Orthologue:
ARID1A
Human Description:
AT rich interactive domain 1A (SWI-like) [Source:HGNC Symbol;Acc:11110]
Mouse Orthologue:
Arid1a
Mouse Description:
AT rich interactive domain 1A (SWI-like) Gene [Source:MGI Symbol;Acc:MGI:1935147]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa10989 | Nonsense | Available for shipment | Available now |
sa10925 | Nonsense | Available for shipment | Available now |
sa22893 | Nonsense | Available for shipment | Available now |
sa22894 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10989
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084263 | Nonsense | 1327 | 2285 | 18 | 20 |
ENSDART00000135930 | Nonsense | 830 | 1788 | 16 | 18 |
ENSDART00000084263 | Nonsense | 1327 | 2285 | 18 | 20 |
ENSDART00000135930 | Nonsense | 830 | 1788 | 16 | 18 |
The following transcripts of ENSDARG00000079879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 36398614)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 34028397 |
GRCz11 | 16 | 33982427 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATTATTTGCATTGGTTAATCTTTTTTTTTTTTTTTTTAATTCAGAACTA[C/A]AAAAGGCCAGGTGATGGCAGCTATCCTCCAGCTAAACGGCATCATGATGG
Long Flanking Sequence:
CACCAACTATGAGAGAAGGTATACTGAATGTTTGCTTAAGACATAAACTCACTTTTTTTTGTTTTGTGGTGTTATGGAAATTATGCAATGAACTGTGCTGTTTTGAGTAGACCAGAATCAGGGATGGGCCCAGATGGCAGCATAGGGCCTGGAGTGCCACAGCCAAATATGATGCCTTCCAATGCTGAATCTGGGATGTACTCACCAAACCGTTACCCTCCACAGCAACAGCGGTCAGTCCACTAACTGTTTTGATTTTAATGAAGATTTTATATCTGCCTCTACATCTGATTTCATTTGCATTTGGTGCTCTGTGCAGGCATGATTCCTATAGTAGTCAGTATCCAGGACAGAGTGCACCACCTGCTGGCTCCTATCCGAATCAGCAGCCTGGAATGTTCCCGCAACAACAATCGGTAGGGAAGCAGTTATAAGGATGATTTGATGGTTTATTATTTGCATTGGTTAATCTTTTTTTTTTTTTTTTTAATTCAGAACTA[C/A]AAAAGGCCAGGTGATGGCAGCTATCCTCCAGCTAAACGGCATCATGATGGGGAGATGTTTGGTGGGCCATACAATGCTCAGCAGCCACAGCCACCAACGCAGGCTCCCCCTAGTGGACCCACAAGTGCTCAGCAGGAAATGTATAATCAGTATAACAGTTCTTACCCTGGTTCAGAGCGTCGCCCTCCAGGTGCTCAGAATCAGTTTCCTTTCCCTTTTGGAAGAGATCGGATGCAACCAGGGACTGGCCCAAACTCCCAGGGTTCTATGCCTCCTCAAATGATGGGCAGTCAAATGCAGTCTGCTCCTGATGGTCCTCAAGGTGGTATGTGGCAGGGCCGAGGTGATATGGGCTACTCCAATTACCCCAATCGTCAGGGGCCTCCTGCTGGTCCTGGCCAGGGCCCTGGTTACCATACAATGAACAGATCTGAAGACATGATGTCATCTGAACCACGTATGAATCATGATGGGCAGTGGCCTGGGCCACGTCAACCCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10925
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084263 | Nonsense | 1327 | 2285 | 18 | 20 |
ENSDART00000135930 | Nonsense | 830 | 1788 | 16 | 18 |
ENSDART00000084263 | Nonsense | 1327 | 2285 | 18 | 20 |
ENSDART00000135930 | Nonsense | 830 | 1788 | 16 | 18 |
The following transcripts of ENSDARG00000079879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 36398614)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 34028397 |
GRCz11 | 16 | 33982427 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATTATTTGCATTGGTTAATCTTTTTTTTTTTTTTTTTAATTCAGAACTA[C/A]AAAAGGCCAGGTGATGGCAGCTATCCTCCAGCTAAACGGCATCATGATGG
Long Flanking Sequence:
CACCAACTATGAGAGAAGGTATACTGAATGTTTGCTTAAGACATAAACTCACTTTTTTTTGTTTTGTGGTGTTATGGAAATTATGCAATGAACTGTGCTGTTTTGAGTAGACCAGAATCAGGGATGGGCCCAGATGGCAGCATAGGGCCTGGAGTGCCACAGCCAAATATGATGCCTTCCAATGCTGAATCTGGGATGTACTCACCAAACCGTTACCCTCCACAGCAACAGCGGTCAGTCCACTAACTGTTTTGATTTTAATGAAGATTTTATATCTGCCTCTACATCTGATTTCATTTGCATTTGGTGCTCTGTGCAGGCATGATTCCTATAGTAGTCAGTATCCAGGACAGAGTGCACCACCTGCTGGCTCCTATCCGAATCAGCAGCCTGGAATGTTCCCGCAACAACAATCGGTAGGGAAGCAGTTATAAGGATGATTTGATGGTTTATTATTTGCATTGGTTAATCTTTTTTTTTTTTTTTTTAATTCAGAACTA[C/A]AAAAGGCCAGGTGATGGCAGCTATCCTCCAGCTAAACGGCATCATGATGGGGAGATGTTTGGTGGGCCATACAATGCTCAGCAGCCACAGCCACCAACGCAGGCTCCCCCTAGTGGACCCACAAGTGCTCAGCAGGAAATGTATAATCAGTATAACAGTTCTTACCCTGGTTCAGAGCGTCGCCCTCCAGGTGCTCAGAATCAGTTTCCTTTCCCTTTTGGAAGAGATCGGATGCAACCAGGGACTGGCCCAAACTCCCAGGGTTCTATGCCTCCTCAAATGATGGGCAGTCAAATGCAGTCTGCTCCTGATGGTCCTCAAGGTGGTATGTGGCAGGGCCGAGGTGATATGGGCTACTCCAATTACCCCAATCGTCAGGGGCCTCCTGCTGGTCCTGGCCAGGGCCCTGGTTACCATACAATGAACAGATCTGAAGACATGATGTCATCTGAACCACGTATGAATCATGATGGGCAGTGGCCTGGGCCACGTCAACCCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22893
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084263 | Nonsense | 1438 | 2285 | 18 | 20 |
ENSDART00000135930 | Nonsense | 941 | 1788 | 16 | 18 |
The following transcripts of ENSDARG00000079879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 36398947)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 34028730 |
GRCz11 | 16 | 33982760 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGGGCAGTCAAATGCAGTCTGCTCCTGATGGTCCTCAAGGTGGTATGTG[G/A]CAGGGCCGAGGTGATATGGGCTACTCCAATTACCCCAATCGTCAGGGGCC
Long Flanking Sequence:
GTAGTCAGTATCCAGGACAGAGTGCACCACCTGCTGGCTCCTATCCGAATCAGCAGCCTGGAATGTTCCCGCAACAACAATCGGTAGGGAAGCAGTTATAAGGATGATTTGATGGTTTATTATTTGCATTGGTTAATCTTTTTTTTTTTTTTTTTAATTCAGAACTACAAAAGGCCAGGTGATGGCAGCTATCCTCCAGCTAAACGGCATCATGATGGGGAGATGTTTGGTGGGCCATACAATGCTCAGCAGCCACAGCCACCAACGCAGGCTCCCCCTAGTGGACCCACAAGTGCTCAGCAGGAAATGTATAATCAGTATAACAGTTCTTACCCTGGTTCAGAGCGTCGCCCTCCAGGTGCTCAGAATCAGTTTCCTTTCCCTTTTGGAAGAGATCGGATGCAACCAGGGACTGGCCCAAACTCCCAGGGTTCTATGCCTCCTCAAATGATGGGCAGTCAAATGCAGTCTGCTCCTGATGGTCCTCAAGGTGGTATGTG[G/A]CAGGGCCGAGGTGATATGGGCTACTCCAATTACCCCAATCGTCAGGGGCCTCCTGCTGGTCCTGGCCAGGGCCCTGGTTACCATACAATGAACAGATCTGAAGACATGATGTCATCTGAACCACGTATGAATCATGATGGGCAGTGGCCTGGGCCACGTCAACCCCCCTTTGGGCCTGGTGGGGCAGGCCCACCAATTAGCAGACCCTTGCAATCTAACTACCAGTCTCCCCAAACCATGCAAAACCACATTCCACAGGTGTCAAGCCCCACACCCATGCCTCGCCCCATGGAAAGCAGGACTTCTCCCAGCAAGTCACCTTACATGCCCAGCAATATCAAAATGCAGAAGGCGGGGCCTCCAGTCCCTGCATCTCACATAGTACCTCCCTCAGTGCAGCCTCCAATGATGAGAAGAGACCTATCCTTCCCCCCAGGTTCTATAGAGGCAACACCACCAGTTCTCAAATCTCGCAGGCGTCTTACCATGAAAGAAATTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22894
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084263 | Nonsense | 1723 | 2285 | 20 | 20 |
ENSDART00000135930 | Nonsense | 1226 | 1788 | 18 | 18 |
The following transcripts of ENSDARG00000079879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 36399994)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 34029777 |
GRCz11 | 16 | 33983807 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAAGATGGAGAAACTGAAGAGGAAGATGAAGGGGAAGAAGTGCAGAGGT[C/A]AAAACATCAAGAACAACATGCAGCACAAGTACCTCTCCAAATAAAACAGG
Long Flanking Sequence:
ATAACTTAGAACTGTGAGTTATACATGGGTAACTGTATACTCCTTTTATAGGCACTCCAGAAGCATGGAGAGTTATGATGTCTCTTAAATCTGGACTGTTGGCGGAGAGTACATGGGCTTTAGACACCATCAATATCTTATTATATGATGACAACAGTATTTCAAATTTCAACCTCATGCAGGTAAGTCGTTTTGGGAAAATGACACATATCTTTTTTTTTTTTTGCCAATACTCTAGTTTTCATCCTAAATGATATACTGGTGTTTTCTTTTGAAGCTCCCTGGTTTCCTGGAACTGATTGTTGAGTATTTCCGCCGTTGCCTCATTGAAATCTTTGGCATTCTGAGGGAATATGAAGTTGGAGATCCAGGACAAAGAGCTCTGTTGGATCCCAATGTCCTTAAAGAAGAAAACACTGTGGAGGATGAGGCATTTATGGAGGGCATGGAGGAAGATGGAGAAACTGAAGAGGAAGATGAAGGGGAAGAAGTGCAGAGGT[C/A]AAAACATCAAGAACAACATGCAGCACAAGTACCTCTCCAAATAAAACAGGAAGAAAAGCCAATGACTCTTGAAGAATCTGTGAAGAAAGAAGACAGCCAAGGCATTGAAGGAGAGTCATCTGCAGAAACCAAGGCTTCAGAGCCACCGTGTCTTGAGTTGGCTGTGACTCAAGAGAAGCCCAAACAGGCTAGCAAGTTTGATAAGCTTCCCTTGAAGATAGTGCGAAAGAAGGACCCGTTTGTAGTAGACTGCTCAAATAAGCTTGGCCGGTTGCAGGAATTTGACAGTGGACTCCTGCACTGGAGTATTGGTGGAGGTGATACAACAGAACACATCCAGACCCACTTTGAAAGCAAGATAGAGCTGTTACGCCAACGAACTCGTTTACCTGCTCAGGGCTCAGACAGGAAGAAAGGAGCTCAGAAGGAAAGCCAGGCCCCTTCATTGCCTTTATCTAGTGAAGAGCATCGGAAAGAAGTGGACCGGCAGCCTTCTCCTG
Associated Phenotype:
Not determined