Busch Lab

ZMP

SYNPO2 (1 of 2)

Ensembl ID:
ENSDARG00000079675
Description:
synaptopodin 2 [Source:HGNC Symbol;Acc:17732]
Human Orthologue:
SYNPO2
Human Description:
synaptopodin 2 [Source:HGNC Symbol;Acc:17732]
Mouse Orthologue:
Synpo2
Mouse Description:
synaptopodin 2 Gene [Source:MGI Symbol;Acc:MGI:2153070]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa41085 Nonsense Mutation detected in F1 DNA Not yet available
sa17461 Nonsense Available for shipment Available now
sa18367 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa41085
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115039 Nonsense 189 733 2 6
Genomic Location (Zv9):
Chromosome 7 (position 72585924)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 69637966
GRCz11 7 69879311
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGCCTGAGACCAAGGGTAAAGGAGCACTCATGTTTGCCCAGCGCAAA[C/T]AGCGCATGGATGAGATAGTAGCTGAGCATGAAGAGCTGAGACGTAAGGGG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa3622
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115039 Essential Splice Site 458 733 4 6
Genomic Location (Zv9):
Chromosome 7 (position 72584177)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 69636209
GRCz11 7 69877564
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCCACCTTGGGTCTCTCAGGCCAAACAGCAAGAACCAGCACAGCCACCGG[T/C]AAATGCATGGACTCAATCACAGAGTCCAATTCAAGCACAGCCTCAATGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17461
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115039 Nonsense 510 733 5 6
Genomic Location (Zv9):
Chromosome 7 (position 72583616)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 69635648
GRCz11 7 69877003
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTACTGTGGCATCCCATGGTTTTGGTTCGGCTTTTGAGATGCCGGCAT[T/A]GAAAGGGAAAGGGGCAGAACTTTTCGCCAAGAGGCAATCCAGAATGGARA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18367
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115039 Nonsense 565 733 5 6
Genomic Location (Zv9):
Chromosome 7 (position 72583451)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 69635483
GRCz11 7 69876838
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTGCCAACTTCCTGGAAATATTCACCCAATTGYCGGGCACCCCCACCTT[T/A]GGCTTATAATCCAATTCATTCACCATCATATCCCCCAGGTGCYGTCAAGC
Associated Phenotype:
Not determined