ZMP

fam20a

Ensembl ID:

ENSDARG00000079486

ZFIN ID:

ZDB-GENE-081022-117

Description:

family with sequence similarity 20, member A [Source:RefSeq peptide;Acc:NP_001124252]

Human Orthologue:

FAM20A

Human Description:

family with sequence similarity 20, member A [Source:HGNC Symbol;Acc:23015]

Mouse Orthologue:

Fam20a

Mouse Description:

family with sequence similarity 20, member A Gene [Source:MGI Symbol;Acc:MGI:2388266]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa27857	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa41932	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa27857

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000112182	Essential Splice Site	110	527	1	11

Genomic Location (Zv9):

Chromosome 12 (position 3531394)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	2904914
GRCz11	12	2939647

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCCAGGAGCTCATCAACTACTACCAGAGGAAAGTGAGCCGCTGGGAGAGG[T/C]AATACACAGTTGATTTGTTGATGTTTATAGCAGGATTTAAAGGGGTAGTT

Long Flanking Sequence:

TGGGAAGGTGCATCTGGAATCTTGCCTAAAGGCAGAAAGCGCACTGCTTTTACACTCCGGCACGCGCTCAGATGCTGGAGCCGCTGAAAGGAGCAACACATGTCTCCAATGAATGGATTATAACAACCGGAAACTGGACGTCGTTTACAGTCATTCAATCCTGAAGGGCCATGAGGAGGGACCGGCTGCTGGTGGCCGTCACTTTGGTCACTCTTCTAGCAGCTGATCTCCATTTCATCCTCCTCCCCAGACTCAAATCCTGGTATTTTCTGCCCAGAGAGAGCTGCTCCTGCGGGGACTCCAATGGGAGTGTGGATGCGATGTGGATGTGGAGTCAGAATTGGACAGCGGTTTCCATTGAGAAAGGCTCTAAGCTGGAGCGGCTCTTCAGGCATCCGCTTTACAACATCCGTCTGCCGGATCTGAGGGCCGATGAGCTCCTGCTGGAGCGCCAGGAGCTCATCAACTACTACCAGAGGAAAGTGAGCCGCTGGGAGAGG[T/C]AATACACAGTTGATTTGTTGATGTTTATAGCAGGATTTAAAGGGGTAGTTCACCCAAAAAAATGAACAGTTCAACTCAAGTGGTTGTAAACTTAGTCTCTTTCTTCTGTTGAACATAAAAGAAGATATTCTGAAGAATGTTTGGGAAAAAAGCTGCCATTGTGATTAATTGTAGGAACTGAACATACTTCAAAATATCTTCCTTTGTGTTCAACACAAGATAAAATAATAGAATATAGATTGAATAAAAATAGTTACTTAATCAAAAGTAAAACTGAATTATTAACTATTAAAAAACATCTTATTTTTAATTTACTTCAGTTAAAAAAACTAAAATAGTAATATAATAGAAAAATGGGAGAAATTTAATAATGAAAGCCCTTCAACACGGAATTAAAAATACAAATAAAATCAATGTGAAACTGATTTAAAATTAAATAACAGCACTCATTTATTTTCTTGTCGGCTTAGTCCCTTTATTAATCCGTGGTCGCCACAGCG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa41932

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000112182	Nonsense	237	527	5	11

Genomic Location (Zv9):

Chromosome 12 (position 3511948)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	2885468
GRCz11	12	2920201

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCGGCACGAAGAGACACCAGAGAACTTCTTTTACTTTGTGGACTTTCAG[A/T]GACATAATGCCGAGATCGCAGCTTTCCATCTCGACAGGTGAGACTTCATG

Long Flanking Sequence:

GGGCTACGTTTCCAGAATGAGCCCGGGTTGGATAAAATTGTATACCTCATCACACACACGAAAGAAGACTCTTAAGCCCACTAGGCTATTAAACTGATTATGTACATTTGCAAACAAAGCCTACAAATTCCAAGTTACTGACTTACTTAAAATATGACTCAATATGAACATGCTAACTACATTTTTGCTGATACTGTTTGTGTTATTAAGACAGTTTGGCTTAATATTTTATCAGCATTATGTTCACATTAATAAAGAAATATGACTGTTTTCATTTTGTCTGACTCTTCAATCAGTGGTCAAACCGAGCGGCCTTCACCTGAAATTGGCCCTGAAGCTCCAAGACTTTGGCAAAGCTATGTTTAAACCAATGAGGTAAGACTTTAGATTTACTCATTCAAATGTCAGCATTACTTTAGGTGTAACCGTGTGATCTTGATTTCAGACAGGAGCGGCACGAAGAGACACCAGAGAACTTCTTTTACTTTGTGGACTTTCAG[A/T]GACATAATGCCGAGATCGCAGCTTTCCATCTCGACAGGTGAGACTTCATGCGAAAAATTGCCCCTTATACCCCTAAATAGTGCACTATTAGAGAGAGCAGCCATTTCTAGTGGTGTCCGAAACTATGGACATCATATAGTGCACTCAATCAGTCCCACAATACCCATGCACACTCAACAGCTAGAAAATACCCATAATGCACTGTGAGAGTTCCCACACCAAATGAAATTCCGTGATGACATCAACAGCAAAACACCATCAGCTTTCACTGTCAGCACAGAGGGTATAGGGGATGATTTCAGAGCAAAACAAAGAGTGAATATGAAGAGACAGACAGGCAGGAATGAATGATGGTGTGCAGGATCTGATATGAGTAAACAGATGAAATCCCTCAGGCTGAGTGATACTGTACATTATTGTAAAGGCCTGTTCAGACAATGAGCTTCAGCTTGATGTTTGGTGGGTGATTAAATGATGATGAAACTCTACAGCAAACTGAA

Associated Phenotype:

Not determined