ZMP

LOC100334474

Ensembl ID:

Human Orthologues:

SAMD9, SAMD9L

Human Descriptions:

sterile alpha motif domain containing 9 [Source:HGNC Symbol;Acc:1348]
sterile alpha motif domain containing 9-like [Source:HGNC Symbol;Acc:1349]

Mouse Orthologue:

Samd9l

Mouse Description:

sterile alpha motif domain containing 9-like Gene [Source:MGI Symbol;Acc:MGI:1343184]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6877	Nonsense	Mutation detected in F1 DNA	Not yet available
sa45127	Nonsense	Mutation detected in F1 DNA	Not yet available
sa33084	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6877

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000108630	Nonsense	438	954	1	3

Genomic Location (Zv9):

Chromosome 3 (position 6850978)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	6674672
GRCz11	3	6560512

KASP Assay ID:

554-4830.1 (used for ordering genotyping assays)

KASP Sequence:

CTAACATTCTGCTTACAACWGAKTTATTTTAYGAGTACACTCTGGGAAAA[C/T]AAAAATTAATGCAGGATGTTCACARCATGTTGGTGAGGAGGCAGAATTCA

Long Flanking Sequence:

TATCTGAAAAGGAACAGAAACTGTTTGAAGAAAAGCTAAAGGAGATTGAGAAGACCAACAGAAACACTAAAACGTTTTATGGATTCATGATTCTAAAGTCCAACTATTCTTCCACGTATATACAGGGTGTTGTAAAAAGCACCCTCATTGGATTCAATCTCCAACACAAGCATGCTCAGCTTTTTGCAGTTCTTGTCCTCTTGCATGTCTACTGCAAGAATGCAGTGCTGTCAGTCTCTACATGTGAAGAGTTCCTTGGTTTGGAAACGAAAGCAGACTCTACATCCTGCAATGTGGAAAATGGGTTCAAGAAGTTTTCCACTCTTTTGAAAAAATGCCCGGTTGATTATAAAATTTCCTTTGAGGGCGTGCGGGTGATTCACTCAAGTATAGCTCAACACTGCTTGAAGGAGCTTTCAGCTTCTCATGGAGTGACGAAGGCAGAAATCACTAACATTCTGCTTACAACAGAGTTATTTTACGAGTACACTCTGGGAAAA[C/T]AAAAATTAATGCAGGATGTTCACAGCATGTTGGTGAGGAGGCAGAATTCAGTTGAGGCTGAAGACTCCCTTTTTTCTCCACTTATCCAAGATATAATGAAAGAGACACCAGGGATGGAAGAAACTGTTCTTCTCAATGCAGTAAAGTGCTATAGAAAAGATGTAGCAATACCCCAGCTTCTCGCCAGGTACTATTACATTAAGAAACAAGACTTTAGTATGGCCAAGGATTGGGCAAAGAAAGCCAAAGACCTTTCAGGGGAGAACTCATACATGTGTGATACAGTATCACAGGTATATGTGAATGAGCTGAAATGTGCTTTTCGCGAAGATAAAGATGATCCCATCAGCCCAAACAGTCTTGATAGATATCTTACATTGGCTAAGACGGCAACAGAAGCTTGCAAAGAAACACAACAAACAGCAAACAAAGAAGCCATTACTCGACTGCAAAGACAAAAGGATTATACTACCTACAACACTGCTGGCCATTTCTGTGAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45127

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000108630	Nonsense	520	954	1	3

Genomic Location (Zv9):

Chromosome 3 (position 6851224)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	6674426
GRCz11	3	6560266

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACATTAAGAAACAAGACTTTAGTATGGCCAAGGATTGGGCAAAGAAAGCC[A/T]AAGACCTTTCAGGGGAGAACTCATACATGTGTGATACAGTATCACAGGTA

Long Flanking Sequence:

AAGAGTTCCTTGGTTTGGAAACGAAAGCAGACTCTACATCCTGCAATGTGGAAAATGGGTTCAAGAAGTTTTCCACTCTTTTGAAAAAATGCCCGGTTGATTATAAAATTTCCTTTGAGGGCGTGCGGGTGATTCACTCAAGTATAGCTCAACACTGCTTGAAGGAGCTTTCAGCTTCTCATGGAGTGACGAAGGCAGAAATCACTAACATTCTGCTTACAACAGAGTTATTTTACGAGTACACTCTGGGAAAACAAAAATTAATGCAGGATGTTCACAGCATGTTGGTGAGGAGGCAGAATTCAGTTGAGGCTGAAGACTCCCTTTTTTCTCCACTTATCCAAGATATAATGAAAGAGACACCAGGGATGGAAGAAACTGTTCTTCTCAATGCAGTAAAGTGCTATAGAAAAGATGTAGCAATACCCCAGCTTCTCGCCAGGTACTATTACATTAAGAAACAAGACTTTAGTATGGCCAAGGATTGGGCAAAGAAAGCC[A/T]AAGACCTTTCAGGGGAGAACTCATACATGTGTGATACAGTATCACAGGTATATGTGAATGAGCTGAAATGTGCTTTTCGCGAAGATAAAGATGATCCCATCAGCCCAAACAGTCTTGATAGATATCTTACATTGGCTAAGACGGCAACAGAAGCTTGCAAAGAAACACAACAAACAGCAAACAAAGAAGCCATTACTCGACTGCAAAGACAAAAGGATTATACTACCTACAACACTGCTGGCCATTTCTGTGAACTTCAAGTTGCAGCTACAGTCATAGAAATCCTGCAAAAGACACCACCGTATAAATCACAGTCAGAGCTAGCGGGATCAAACACAAAACAGTCGACTGATGCAGAGAGTGAGCCATATTACCAAGTACTGGGGAGGCATGTCGACTTTCTAACTCAACATAAAGCAATGATGAAGCAAGATTTTGTTTTTCTTGAGACCTTTTTTGTCAACTTGGTTCCCTTTTTTGCCGGGAAAGACAAACAAAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa33084

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000108630	Nonsense	634	954	1	3

Genomic Location (Zv9):

Chromosome 3 (position 6851566)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	6674084
GRCz11	3	6559924

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGACACCACCGTATAAATCACAGTCAGAGCTAGCGGGATCAAACACAAAA[C/T]AGTCGACTGATGCAGAGAGTGAGCCATATTACCAAGTACTGGGGAGGCAT

Long Flanking Sequence:

AAGATATAATGAAAGAGACACCAGGGATGGAAGAAACTGTTCTTCTCAATGCAGTAAAGTGCTATAGAAAAGATGTAGCAATACCCCAGCTTCTCGCCAGGTACTATTACATTAAGAAACAAGACTTTAGTATGGCCAAGGATTGGGCAAAGAAAGCCAAAGACCTTTCAGGGGAGAACTCATACATGTGTGATACAGTATCACAGGTATATGTGAATGAGCTGAAATGTGCTTTTCGCGAAGATAAAGATGATCCCATCAGCCCAAACAGTCTTGATAGATATCTTACATTGGCTAAGACGGCAACAGAAGCTTGCAAAGAAACACAACAAACAGCAAACAAAGAAGCCATTACTCGACTGCAAAGACAAAAGGATTATACTACCTACAACACTGCTGGCCATTTCTGTGAACTTCAAGTTGCAGCTACAGTCATAGAAATCCTGCAAAAGACACCACCGTATAAATCACAGTCAGAGCTAGCGGGATCAAACACAAAA[C/T]AGTCGACTGATGCAGAGAGTGAGCCATATTACCAAGTACTGGGGAGGCATGTCGACTTTCTAACTCAACATAAAGCAATGATGAAGCAAGATTTTGTTTTTCTTGAGACCTTTTTTGTCAACTTGGTTCCCTTTTTTGCCGGGAAAGACAAACAAAAAGAGGCAATCAAGCACAAGGTTTGCAAATATTTTCAACAGTATACTGAAGTCTTCTGTAAAATCAATTGGAGTGAGCTACGTAACAAAGAGTTTATGAACCGACCAAATAAAATAGCTCAGATTCATGAATGTCTGGAGAAGAACAGGGGTGATACATATACTGGCCTTCTGGAATACTTGTATGAGGAAAATTCTTCATCAACTCTTGAAGAGATCATCCAGCAGTATCGTTTCTTTCTGGATCCCAAAACAGAGGACAGAGAAGTAATGGATACTATCAACTTTATTTATGCCAATGTAATTCTAGCCAACATCAAACCTAAATCTCAGTACATCATGCCC

Associated Phenotype:

Not determined