ZMP

foxe1

Ensembl ID:

ZFIN ID:

Human Orthologues:

FOXE1, FOXE3

Human Descriptions:

forkhead box E1 (thyroid transcription factor 2) [Source:HGNC Symbol;Acc:3806]
forkhead box E3 [Source:HGNC Symbol;Acc:3808]

Mouse Orthologues:

Foxe1, Foxe3

Mouse Descriptions:

forkhead box E1 Gene [Source:MGI Symbol;Acc:MGI:1353500]
forkhead box E3 Gene [Source:MGI Symbol;Acc:MGI:1353569]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa39620	Nonsense	Mutation detected in F1 DNA	Not yet available
sa32687	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa39620

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109297	Nonsense	33	354	1	1

Genomic Location (Zv9):

Chromosome 1 (position 25668903)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	26009120
GRCz11	1	26702834

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTCCAGTGAATGACAGTCAGAGAGCAGAGCCGCAAAGAGGCCGTCGGAGG[A/T]AGAGGCCCCTTCAGCGAGGCAAACCACCATACAGCTACATCGCTCTGATC

Long Flanking Sequence:

GTGTGGCTAATAACTCTTCAGGTAGTGTGTTCCTTGGTCAGCACAGTCAGTTATTGACTGCTCACTTGTCTCTTCCACATTACGAAGACCACTACCAAAAAAGACTGTTTATGTGAGTGCTTCCATTTTTTATGTTCACTTAGTTTTGCATGAACTCCTCTGAATTAAGGACACTGTGGTGTAAGGATACACTTAACGATACAGATGAAGATCAAAGGAACAGATCTTTCTGCTTGGGGATTTTAAGGTCTGCATTATGACTGGTACTTTTTCACCAGAATACATTCAGCAAGCAAAGACCATTTGCTGCTCCTGACAAAGAACCCGGTGAACCGAATCAGTGACAGTCAGACTATAGTGATTTCCAAGCTGTGCTACCTTTGGGAGCGATTCTAACTAGAGTCATGCCTGTGGTTAAAGTGGAGAGTGATTCTCCCTCTGAAACCACTCTTCCAGTGAATGACAGTCAGAGAGCAGAGCCGCAAAGAGGCCGTCGGAGG[A/T]AGAGGCCCCTTCAGCGAGGCAAACCACCATACAGCTACATCGCTCTGATCTCCATGGCCATCGCTAACTCGCCTGACCGCAAACTCACTCTGGGAGGGATCTACAAGTTTATCACCGAGAGGTTTCCCTTCTATCGAGACAACTCCAAGAAATGGCAGAACTCCATCCGCCATAATTTGACACTCAACGACTGCTTTATCAAGATCCCACGAGAGCCCGGTAGGCCCGGAAAAGGCAACTACTGGGCTCTTGACCCTAACGCCGAAGACATGTTTGAAAGTGGAAGCTTCCTACGACGTCGAAAGCGGTTCAAGCGCAGCGACTTCACTACATATTCATCATATGTGCACGAATCTCCCGTTTTCTCACCGGTCCAGATTGCGCGCTCAGCCTACGCCAACTCCGTCTACTCCAACATGGCTGTGAGTCCGCCATACGCACAACAGCTTCCTTCTGCTTACTACCAGTCCTCCTCTCCAAACTTCACAGCGGGTCAGTCA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa32687

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109297	Nonsense	84	354	1	1

Genomic Location (Zv9):

Chromosome 1 (position 25668749)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	26008966
GRCz11	1	26702680

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAAGTTTATCACCGAGAGGTTTCCCTTCTATCGAGACAACTCCAAGAAAT[G/A]GCAGAACTCCATCCGCCATAATTTGACACTCAACGACTGCTTTATCAAGA

Long Flanking Sequence:

CTCCTCTGAATTAAGGACACTGTGGTGTAAGGATACACTTAACGATACAGATGAAGATCAAAGGAACAGATCTTTCTGCTTGGGGATTTTAAGGTCTGCATTATGACTGGTACTTTTTCACCAGAATACATTCAGCAAGCAAAGACCATTTGCTGCTCCTGACAAAGAACCCGGTGAACCGAATCAGTGACAGTCAGACTATAGTGATTTCCAAGCTGTGCTACCTTTGGGAGCGATTCTAACTAGAGTCATGCCTGTGGTTAAAGTGGAGAGTGATTCTCCCTCTGAAACCACTCTTCCAGTGAATGACAGTCAGAGAGCAGAGCCGCAAAGAGGCCGTCGGAGGAAGAGGCCCCTTCAGCGAGGCAAACCACCATACAGCTACATCGCTCTGATCTCCATGGCCATCGCTAACTCGCCTGACCGCAAACTCACTCTGGGAGGGATCTACAAGTTTATCACCGAGAGGTTTCCCTTCTATCGAGACAACTCCAAGAAAT[G/A]GCAGAACTCCATCCGCCATAATTTGACACTCAACGACTGCTTTATCAAGATCCCACGAGAGCCCGGTAGGCCCGGAAAAGGCAACTACTGGGCTCTTGACCCTAACGCCGAAGACATGTTTGAAAGTGGAAGCTTCCTACGACGTCGAAAGCGGTTCAAGCGCAGCGACTTCACTACATATTCATCATATGTGCACGAATCTCCCGTTTTCTCACCGGTCCAGATTGCGCGCTCAGCCTACGCCAACTCCGTCTACTCCAACATGGCTGTGAGTCCGCCATACGCACAACAGCTTCCTTCTGCTTACTACCAGTCCTCCTCTCCAAACTTCACAGCGGGTCAGTCAAGGGTCTTCAGAATCAATTCTCTCATTGGGTCACCAAGCCGGATGGGTCAAAACGCAGAGATGATCCCACAGCAGTCCTGTCGCAGTTTCAGTCCTGAAAGTGGCTCCTGCAGTTTGGGAGGACCGGGCTTCCAGCATCAGTCCTGCAACGGGG

Associated Phenotype:

Not determined