ZMP
bat5l
Ensembl ID:
ZFIN ID:
Description:
protein BAT5 [Source:RefSeq peptide;Acc:NP_001104648]
Human Orthologues:
BAT5, C20orf135
Human Descriptions:
HLA-B associated transcript 5 [Source:HGNC Symbol;Acc:13921]
chromosome 20 open reading frame 135 [Source:HGNC Symbol;Acc:16128]
chromosome 20 open reading frame 135 [Source:HGNC Symbol;Acc:16128]
Mouse Orthologues:
BC050777, Bat5
Mouse Descriptions:
HLA-B associated transcript 5 Gene [Source:MGI Symbol;Acc:MGI:99476]
cDNA sequence BC050777 Gene [Source:MGI Symbol;Acc:MGI:3607711]
cDNA sequence BC050777 Gene [Source:MGI Symbol;Acc:MGI:3607711]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15277 | Nonsense | Available for shipment | Available now |
sa6412 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa15277
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110606 | Nonsense | 102 | 543 | 4 | 20 |
ENSDART00000125621 | Nonsense | 115 | 557 | 5 | 22 |
Genomic Location (Zv9):
Chromosome 16 (position 12115786)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 10615452 |
GRCz11 | 16 | 10506354 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGAGTCAGTATGTWGGAACAGCGCTGGTCTGTCTGCTYGGAGTGGCCTG[T/A]CTGAGAGGTGATGCTATATTTACNTTTTTTTATTACCAATGTTTGTCTAT
Long Flanking Sequence:
AGAAATCAGTTATTAGATATTAGTTATTAAAACTATTATGTTAGAAATATGTTGAAAACAATCTTTCCGTTAAAACAAACATGAGAGTTTCACCACATTTTCAGTTCATAATTGTCCAATTTTATTAAAAAAAAAAAAAAAACTCAAGCACATTGCTCTGAAAATTTCAATCAGTTGTAATATTAAACTGATATTAATCATGTTAAACTGAAAATTTGCTTTAAAATTTTTGTTCTCTGCTCATGTAAACCATAAACTCTGCCTACTATAATGCTTACTTTAATTTAATTGGTCAGATCTGAATCATTTTGACTTTGCAAAATGCTGTTAGATGGCTGAAACCGCCTAACCTCATTTTTGTTATCTATACTGTATGTCTGCATTGATTCACAGTTGCAGTGTGATTTTGGTTGTGTTATAGGGTACATCTGCAGCAGTAAGCTGGTTCCTCTGAGTCAGTATGTTGGAACAGCGCTGGTCTGTCTGCTCGGAGTGGCCTG[T/A]CTGAGAGGTGATGCTATATTTACCTTTTTTTATTACCAATGTTTGTCTATTTCATCTCTACCTCCCTCAGAAATCAAAACTATTATCAGTTGTTGTATATTAATTAAATGGCAAAAAGAGTGGGATAATCAAATGTAAAATAAATCACATGAAATTTATAATGACATTTTAAACAGATTTGTAATACCTTTAAAAACTAGATTTAATCAAGTGGCATTTAAAAACGATGCCTGCTTTTTTTTTACCTAAGAGCAAAGACTCTTCTGAAAGCTTGTTTTGCAAGATTACCTTTTCTCTGTGAAATTTTTTTTGTACTGTCCTACGTTTAACCTTTGCAGAAAACTCTTTTATAAAGTGAACTCACTTGAAGAGTTTTCAGTAAAGCTCTCTTCAGAAAAGATGTAGAAATTCGATCATATGTTAATGTAAAAATTGTGATGTAGTACAGCATGTGTTTGTTTGCTGGTTTTCAGTTGTGTTCATTATACTTATATTTTCGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6412
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110606 | Nonsense | 330 | 543 | 12 | 20 |
ENSDART00000125621 | Nonsense | 343 | 557 | 13 | 22 |
Genomic Location (Zv9):
Chromosome 16 (position 12098796)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 10598462 |
GRCz11 | 16 | 10489364 |
KASP Assay ID:
554-4179.1 (used for ordering genotyping assays)
KASP Sequence:
CCAAYGCGATGGACGTGGTCATTCAGTTTGCTGTGCACAAACTGGGCTTC[C/T]AGTTGAGTGACATCATAGTTTATGCCTGGTCGATAGGGGGATTCACAGGT
Long Flanking Sequence:
CTGTCTGTCTGTCTGTGTGTGTGACACATCAATGCAGCTGCACAACAAATACTCATTGGTAAAGTTCTTACTGTAGTATTTCTCACAAACACTACGTGAGATCTGCTTCCTTTATGTCTGTCTGTTGATTGACGCTGCCGAGGGAGGAGATTAAGGCATGCAGATAGGCACTTAGAAACGGTAGGCCTGGGGACTAGCCTTAAAGGCGCTTTACGACAAAACAGCCCCCTGGTGGAACAATGTATAACATAGGATCTTGTAAAAGGTATAATGAAAAATCTGATGGGTGTTTTGAGCTGAAACTTTACATGCACATTCTAGAGATGCAAAACACTTGTATTAAATCTGATAAAAGGGGTCACCTTGGTGCCCTTTAAAGAATCATTTATCAAAAATGATCAAAATCTTCTCTTCTGCCTTTTCAGGGAGTTCCTTTTCCTCAAAACGAGGCCAACGCGATGGACGTGGTCATTCAGTTTGCTGTGCACAAACTGGGCTTC[C/T]AGTTGAGTGACATCATAGTTTATGCCTGGTCGATAGGGGGATTCACAGGTAAACAACAGCAGATCAGCCAATCACAGATCAGAGAACACGCAACATGATGCATATGCTTTAATTCTGAATGTTCTGCTCTATTTTAGCCAGTTGGGCTGTGATGTCATACCCAGAGATCAGAGCTCTGGTTCTCGATGCCTCATTCGATGACCTGTTACCCCTTGCACTGAAGGTCATGCCGGACAGCTGGAGTGAGTCCGCAACTTTTTTCTCTCTCTGTTCGACTTCTACAGGCAGTGATGTCCTCAAAGCAATGTTTTTCAATTCTTTGATTTTGGGGTGAACAGATATTTAAATGACCTGAGCTCCTGTTTACTGTTTGTAATGGTACCAATGATGGTCAGGAGTCCCTTTTGCAGTCTATATCAAATTCTTTAAAATAATAGTGATAATTTTGGCCTGATTTGGTTAAAATGTTGCTGGACTAGCAATATTAAGGCAAAAATGGA
Associated Phenotype:
Not determined