Busch Lab

ZMP

ENSDARG00000078898

Ensembl ID:
ENSDARG00000078898
Human Orthologue:
PCDH7
Human Description:
protocadherin 7 [Source:HGNC Symbol;Acc:8659]
Mouse Orthologue:
Pcdh7
Mouse Description:
protocadherin 7 Gene [Source:MGI Symbol;Acc:MGI:1860487]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa19453 Nonsense Available for shipment Available now
sa32628 Essential Splice Site Available for shipment Available now
sa18574 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa19453
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111475 Nonsense 940 1283 2 6
Genomic Location (Zv9):
Chromosome 1 (position 13868925)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 14455711
GRCz11 1 15142224
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAAGAAGGAGCCAGAAGAGGACTTTTTCGGTCCACAGCCTCCCCCTCTA[C/T]AAGCCCAGGGCTCCCAAAATGAGCGTGGGCGCAAACCACGCAGAGACAAG
Long Flanking Sequence:
ACACAAACACAGTGGCATCCACATACACAGTCACACTTGCCTGCGCAGAATAACTATGATTGAATATCCAAGCCTTGACATGATAATTGAGAAGTCTGGGCCTTGCAGTGGGGATGAATGTGTATGCGTGCGTGTGTGGTTCAGCAGACAGTGCTATAAAATGAGGATGCAGTTATCAAAGGGCAGACACACCATTTATGACTTTCCATATTTTTGCTTTTTCTCTCCCTCTGTATGCCTCTCTCTCACTCACTCAGGTGGCCCGCAGCCTTGCAATCCCCCTCTATATGGATATTGCAGGTGACCCAGACAGCGAGAGAGCTCTTGGTAAACAACGCCTGAGCGTTGCCATCGGTGTCTTGGCTGGTGCTGCTGCCGTTATTCTGGTGATCCTTCTGGTTGTGACAGCTCGACAGTGTGGGGCGCAGGGTAAGAACGGCTATGAGGCTGGCAAGAAGGAGCCAGAAGAGGACTTTTTCGGTCCACAGCCTCCCCCTCTA[C/T]AAGCCCAGGGCTCCCAAAATGAGCGTGGGCGCAAACCACGCAGAGACAAGCGTAATAATGGCACTGCCAAATCTGAGCGTTCTTTATACAGTGGAATTATGACGGTGAACGGCTGCAGACGTGGGGGAGGTGATGAAGAAGAGGAGGATGAGGAGAGCAGCAGTGCCAGTGAGAGGATTGCTGCCCGTTATTGCGCAGCAGCTAATGGAGACCCTAGTAGTCCAAGACTAGGCTCAAGGCGCCACCAGTCAAGCCCAGATCTGGCCCGCCACTACAAGTCCAGCTCACCCTTGCCTGCAGTGCATCTTCAGCCCAACTCACCACCCGTGGAAGGCAAGAAGCACCAGGCTGTGCAGGAACTGCCCCCCACTAACACCTTCACTGGCAATGGCACCGGTAACGCAGATGCTATGTCACTCAGCTCAGACCAGTGCTCCGATTACGGCTGTCAAACCATCAAGTACAGCAAACAGGTAAGAACATAAAATAATCTCTGACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32628
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111475 Essential Splice Site 1153 1283 4 6
Genomic Location (Zv9):
Chromosome 1 (position 13924495)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 14511281
GRCz11 1 15197794
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAACCACACCAGAAGGGAGCGTAGGCGAGGAGGAGCATGTGGAAAATG[G/T]TAAAAAGTCATCCGAGGGAAAGATTTGAGGCCAGTAGTGAACAAAAAAGG
Long Flanking Sequence:
GCAAACAATTCCAGCTCTGACTGGTTGCTATGGCTCCACTATGCCGGGTGTTGTGGGTGGTTAATGAAATCAAAAGAGCTCACCTCAAGCCTTTGATATTCAGATGTCATCACATGCTGTTTATTGCTCAGCATAACCCTACTGTACGTGTTAGATATTTATATGCTTATCTACAGAGTGTCAACGAGAGATCATCCTCAATCCAATCAATCAGAGGTCTTTTGCAGATAATCCTCATTGATGTTATACCTGCTGTCACCTCTCATGTGTTAATCCCATGTGTCTCTGTGTCTCTGCGCAGCCCCTCAGAAGAGTGACATTTTCTGTGGTGAGTCAGGCTCCTGATCAAGGCTGCTATGATAGTGGGGTGGAGGACTCAGAGACCCCCAGCAGCAAGAGCTCCTCTGGACCCAGACTGGGATCTTTACCGCTGCCTGAGGACGGATATGAAAGAACCACACCAGAAGGGAGCGTAGGCGAGGAGGAGCATGTGGAAAATG[G/T]TAAAAAGTCATCCGAGGGAAAGATTTGAGGCCAGTAGTGAACAAAAAAGGACATGCGTTTCAAAATTTTATAGAATTATGTTTGTTTTTTGTTCGTCTCTCAGTTCAAAGGGATAGTTCACCCAGAAATTTAAATATTAAAGTAAGATTTTAAAGAATGTTGTTAACAGGACAGTTAAAGGTGCCATATAATGTATTACCTATACTTGTTCTACTAAAAATTAACGTTGATAAATGAATGGGCTTGATTAAGAGACATACCATTTTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATCGATCGATTGATTGATTGATTGATTGACTGACTAGTTGTTTAATTGTTTGTTTGGTTGGTTGGTTGGTTGGTTTGTTGGTTGGGTGGGTGGGTGGCTGATTTTTTGATTGATTGACTGACTGACTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18574
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111475 Essential Splice Site 1154 1283 5 6
Genomic Location (Zv9):
Chromosome 1 (position 13926963)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 14513749
GRCz11 1 15200262
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGACAGTTCTTGACAGGATCTCCTAAAAAGGCCTCTGTTCTCTTTTCCTC[A/T]GACTCCAGGCAGCTYCCTGACGTGGCTCTGACAGGAAAATGCACACACGA
Long Flanking Sequence:
ACTGACTGACTGACTGACTGACTGACTGACTGACTGACAACTCACTGACTGACTGACTGGTTGGTTGGTTGGCTGGTTGGTTGGTCGGTTGTTTGTAGAAAAAAAATGACAAAAAGACCAAAAATTCAAACAGTGTATTTAGAAAATGTATTGGTAATTTTGTGATATAATTTATATATATTTTTTTACATTATCTTTTAGCATTACAAGCTATATATCCATCATTTAAAAAGACTATATTTTAAAATTGTTGAATTGGATTTGTTCTGCCCTGCATGAGTTCCAGCAGTAAATCCCACTCAATCTCAAGCTGACATGAACCTGGCCCCAGACCTCTGGACGCCACTGTAGACAGACAGACTTATTGGTTCTCCAGAGACATCACGAGTCTCTAAAATTTGACAGTCTGAACGAAAATGTTGACCTATTGACCTGTACATACTTGAGTAGAGACAGTTCTTGACAGGATCTCCTAAAAAGGCCTCTGTTCTCTTTTCCTC[A/T]GACTCCAGGCAGCTTCCTGACGTGGCTCTGACAGGAAAATGCACACACGAATGCAACGAGTACGGTCACTCTGACACCTGCTGGATGCCCGTGCAATCCTCACCACGACGACGCATCGAACCACCCCAACTTTCCACCTTCGCCTCACCCGGCGATAACAACAACAACACCGAAGACAACAGCGACCGAGAGGAAGATGGAGATGGAGGAACGGATAAAAGCAGCGGAGGTAGCGACGAGGTGCGGGATTCGCTAGCAAACGGAGATCCACTGGGAACACTCAGCCGCCGGGATCGGAACAGGAACATGGGTGACCATAACCGCAACCTCCTAAACCGTAAAATGACCTCCGCATCCTACGATACATTCAGCAGCGCCGGATTCGGCCGTCGTCCCGATGAAGAAGACTCGCATCCCCCAGAGGTCATACCGCTCACGAGGACGGGGGCTGATTATAAGACCACCTCGTGCCTCACTCTGTCCCGCAGAGAAGTGTACCT
Associated Phenotype:
Not determined