ZMP
si:dkey-174k18.6
Ensembl ID:
ZFIN ID:
Human Orthologue:
VTCN1
Human Description:
V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873]
Mouse Orthologue:
Vtcn1
Mouse Description:
V-set domain containing T cell activation inhibitor 1 Gene [Source:MGI Symbol;Acc:MGI:3039619]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa38732 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa21461 | Nonsense | Available for shipment | Available now |
sa21462 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa38732
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109680 | Nonsense | 6 | 273 | 1 | 5 |
ENSDART00000142220 | Nonsense | 6 | 237 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 9 (position 21553359)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 20709145 |
GRCz11 | 9 | 20520014 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACACTTCATAAAAGTAGACCAGCTTACACCAAAATGGCTTCAATTGGA[C/T]AAATAATCTTTGGAAGGTAGAAACATGGGCTACTTACTTCTCTATTTCAT
Long Flanking Sequence:
TAGTGATCTGCAAGTTTACCAGCTATCTTCCAGGATTAGATCACTGGTATTTGTGACATAAGGCAAGTACATAATAGCTAACTATAAATAAATTACTTTTAATATAAAGTAGAGTAAAACCTTACTTCATTCAGTAATTGCAGTAAGTAAAATTGTTTTATTTTATTCTTATGACCTGTTATGTAGATGAGATCATACACACACTCAACTGTATTTACAGTAGGTGAAAAGGTTACCAACAATTTGTCAAGCAGTGTTTTATCAAGAGTATCAGGACACACCTCTCAGAGGTAACTAATATTGACTTAGGGAGGAGGTGCTGATCTCCTTCAGTGGAAGCAAAGTTAGAAACTAGTCTGAGGGGATTAAATCGTGCTCGTCCGTCTTTGCCTGTTGATTTATTATGCCGTCTACAGAGATGCTGAGCACAGCGGTACATCGATTCATCAAATACACTTCATAAAAGTAGACCAGCTTACACCAAAATGGCTTCAATTGGA[C/T]AAATAATCTTTGGAAGGTAGAAACATGGGCTACTTACTTCTCTATTTCATGTTAAATAGTTAAGTGTACTGTTTAACGGTTCAATTTTGAATGTGTGTCTTCTGCAGTATGATTTGTCTCATAGTAGTCATGTCTGGAATCATCGTTTTCATTTTGGCTATTGCATTTTCAGGTTAGTAAAACTCTTGGTCACACTTTTTTAATGTACAATTCTCACTATAATAAACCATTATTAACTCTGACTTTTGCCTCAATTACCCATTAATTTGCAGCTTATTGGGTGTTTTAGAATAAGATCATGCAGAATATGTACTTCATAAGTACAAATAAAAAGCTAATATCTATATAACAGGCATGTAATAATAAGCCACCAGTTAATATTTTTTGTATAGCGCTTTTCACAATAAGTATCATTCTAAAGCAAATTTACAAAAAGTCTGCATTATTACACTACAATATGAGTTAAGATATTGAGTTTCCGAAGGACAGTACATCAGTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21461
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109680 | Nonsense | 111 | 273 | 3 | 5 |
ENSDART00000142220 | Nonsense | 111 | 237 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 9 (position 21554549)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 20710335 |
GRCz11 | 9 | 20521204 |
KASP Assay ID:
2260-1714.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGG
Long Flanking Sequence:
TTTTAATTCTTTCCTGTTGTCCCTTTACAAATCGATTGTTTGGAGCCCAACATTTTTTACACTATGTATAATACATTTTCAATTAGATGATTTAATCAAAACAAAAAATAAGACCAAATTGTGTGTATTCCTTAAGAGTTTGTGCTGTAAAAGTAAGAATTGTTCCTTAAACTAAAGTGTTATCAAACTTTCATAGAGTTTGTGTGATTATAAATCTTTTGGACTGTAATTAAAACTAATTATCTATGTGTTTGTTTGTTTCCAAGTGTCCCAAGGCACCGTTGAGAGCATTAGTCCAACTACTGTGGGAAATCTTGATGATGATGTGATGCTGGGTTGCAGGTTTCTTAGTAACACAGGCAATGGACAGTTTAGTGATGTGTCAATTACTTGGCTGAAAGATTCCGTCAGTGGTGTGGTTTATGAATACAAGAACAAAGCAGCCCAGCTTCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGGATGACGGCGTGTATCGCTGCACTGTCAATGCAGCAAAAGTCTCCGGAACTGCCATTGTTACACTCAGAGTAGCTGGTAAATACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCAAAGCATATACTGTTTAAAATAGCATTTTTCTGGTTTATTTTTTATGTATACCATTAATCCTTTTTTGAGTAAGTCATTGAATTATTCACGCAATCTGTTTGTTCAAAACTGATTCAGTCAGAAACATTATAAAATATTATATACAAAATTATAACCCTAAATCAGAAATAGTTGGGATAGTGTGAAAGTCGTAAATAAAAAGGAAAGTAGTGATTTCTAAATTTACTTTGACTTTGTATTTCATTTCTGATAACACAACAAACATTATTTAAAGCAACATAGGCTCATTCTGAAAACGTAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21462
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109680 | Nonsense | 174 | 273 | 4 | 5 |
ENSDART00000142220 | Nonsense | 174 | 237 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 9 (position 21556447)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 20712233 |
GRCz11 | 9 | 20523102 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAA
Long Flanking Sequence:
GGCAGGCCAGTCAAGTACCTGTATTCTTTTCCGCCATAGCCAGGACTTTGTAATGTGTGCAAAATGAGGTTTTTCATTGTCTTGTTTAAACATGCATGGGCGTCCCCCTGGAAAAGAAGACCCCCTATCGGCTACAAAAGCTCCAATTAATGGTGTAATGAAATCACTACTTTCTTATTTATTTGCGTGTCAGGTTTCCTGCGTTTAAACCGTCCTAACTTTTTCTGAATTGTGCTTGTATTAGTCGAAGAATGGTACAGTATGTAAAAAGAGAAATGTGTCTGAAGTCATAAGAGAGTGCGTAAGATGGAAACTTTACTATCCCGTGAGGATTTGTGAATTCCGATTAAAAGATATGAATGATTTCTGTTTGTAGCATAACATGGCAGATATAGGATATCTGTGTATTAACTCAGATCTGTGTGTTTATTTGAAGCTTTTTCAGCTCCCACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAACAGCAGCACTAGTTTTTTCAACATTGCAGGAATCATACATGTTTCTAGTCTGCTTCAAGACCCAGTAAAGGAGAATGAAACTTACCGATGTCTCATCCAGAACTCTCTTGTGGTCGCTGTCTCAGAAGCAACTGTCACAGGTAAAATAGTCTACAGTGGAAAAAATAAAAACGATGAAACCAATTATTAGGAAGGACTCACCCATATTAATAACATTTACACAGAGCACTGCATATCAAATCAGGTTTGTTTAAAAAAAAGATGTGATGACAGATTGGACACTTTGGACAAACAAACTGGTTGTGACTCATTAACTAGAATGACACATGTAGATCATGAGTTACACAGCACTATGTTTCTGTTATAAACTATTTCTTTATCTTTACTGTTTCTCAGCACACAAAGTGGCGCAGAGCACATACTTCATTTTCAATGCTGCATCTACAAAAA
Associated Phenotype:
Not determined