Busch Lab

ZMP

si:dkey-174k18.6

Ensembl ID:
ENSDARG00000078643
ZFIN ID:
ZDB-GENE-070912-388
Human Orthologue:
VTCN1
Human Description:
V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873]
Mouse Orthologue:
Vtcn1
Mouse Description:
V-set domain containing T cell activation inhibitor 1 Gene [Source:MGI Symbol;Acc:MGI:3039619]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa38732 Nonsense Mutation detected in F1 DNA Not yet available
sa21461 Nonsense Available for shipment Available now
sa21462 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa38732
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109680 Nonsense 6 273 1 5
ENSDART00000142220 Nonsense 6 237 1 4
Genomic Location (Zv9):
Chromosome 9 (position 21553359)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 20709145
GRCz11 9 20520014
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACACTTCATAAAAGTAGACCAGCTTACACCAAAATGGCTTCAATTGGA[C/T]AAATAATCTTTGGAAGGTAGAAACATGGGCTACTTACTTCTCTATTTCAT
Long Flanking Sequence:
TAGTGATCTGCAAGTTTACCAGCTATCTTCCAGGATTAGATCACTGGTATTTGTGACATAAGGCAAGTACATAATAGCTAACTATAAATAAATTACTTTTAATATAAAGTAGAGTAAAACCTTACTTCATTCAGTAATTGCAGTAAGTAAAATTGTTTTATTTTATTCTTATGACCTGTTATGTAGATGAGATCATACACACACTCAACTGTATTTACAGTAGGTGAAAAGGTTACCAACAATTTGTCAAGCAGTGTTTTATCAAGAGTATCAGGACACACCTCTCAGAGGTAACTAATATTGACTTAGGGAGGAGGTGCTGATCTCCTTCAGTGGAAGCAAAGTTAGAAACTAGTCTGAGGGGATTAAATCGTGCTCGTCCGTCTTTGCCTGTTGATTTATTATGCCGTCTACAGAGATGCTGAGCACAGCGGTACATCGATTCATCAAATACACTTCATAAAAGTAGACCAGCTTACACCAAAATGGCTTCAATTGGA[C/T]AAATAATCTTTGGAAGGTAGAAACATGGGCTACTTACTTCTCTATTTCATGTTAAATAGTTAAGTGTACTGTTTAACGGTTCAATTTTGAATGTGTGTCTTCTGCAGTATGATTTGTCTCATAGTAGTCATGTCTGGAATCATCGTTTTCATTTTGGCTATTGCATTTTCAGGTTAGTAAAACTCTTGGTCACACTTTTTTAATGTACAATTCTCACTATAATAAACCATTATTAACTCTGACTTTTGCCTCAATTACCCATTAATTTGCAGCTTATTGGGTGTTTTAGAATAAGATCATGCAGAATATGTACTTCATAAGTACAAATAAAAAGCTAATATCTATATAACAGGCATGTAATAATAAGCCACCAGTTAATATTTTTTGTATAGCGCTTTTCACAATAAGTATCATTCTAAAGCAAATTTACAAAAAGTCTGCATTATTACACTACAATATGAGTTAAGATATTGAGTTTCCGAAGGACAGTACATCAGTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21461
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109680 Nonsense 111 273 3 5
ENSDART00000142220 Nonsense 111 237 3 4
Genomic Location (Zv9):
Chromosome 9 (position 21554549)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 20710335
GRCz11 9 20521204
KASP Assay ID:
2260-1714.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGG
Long Flanking Sequence:
TTTTAATTCTTTCCTGTTGTCCCTTTACAAATCGATTGTTTGGAGCCCAACATTTTTTACACTATGTATAATACATTTTCAATTAGATGATTTAATCAAAACAAAAAATAAGACCAAATTGTGTGTATTCCTTAAGAGTTTGTGCTGTAAAAGTAAGAATTGTTCCTTAAACTAAAGTGTTATCAAACTTTCATAGAGTTTGTGTGATTATAAATCTTTTGGACTGTAATTAAAACTAATTATCTATGTGTTTGTTTGTTTCCAAGTGTCCCAAGGCACCGTTGAGAGCATTAGTCCAACTACTGTGGGAAATCTTGATGATGATGTGATGCTGGGTTGCAGGTTTCTTAGTAACACAGGCAATGGACAGTTTAGTGATGTGTCAATTACTTGGCTGAAAGATTCCGTCAGTGGTGTGGTTTATGAATACAAGAACAAAGCAGCCCAGCTTCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGGATGACGGCGTGTATCGCTGCACTGTCAATGCAGCAAAAGTCTCCGGAACTGCCATTGTTACACTCAGAGTAGCTGGTAAATACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCAAAGCATATACTGTTTAAAATAGCATTTTTCTGGTTTATTTTTTATGTATACCATTAATCCTTTTTTGAGTAAGTCATTGAATTATTCACGCAATCTGTTTGTTCAAAACTGATTCAGTCAGAAACATTATAAAATATTATATACAAAATTATAACCCTAAATCAGAAATAGTTGGGATAGTGTGAAAGTCGTAAATAAAAAGGAAAGTAGTGATTTCTAAATTTACTTTGACTTTGTATTTCATTTCTGATAACACAACAAACATTATTTAAAGCAACATAGGCTCATTCTGAAAACGTAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21462
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109680 Nonsense 174 273 4 5
ENSDART00000142220 Nonsense 174 237 4 4
Genomic Location (Zv9):
Chromosome 9 (position 21556447)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 20712233
GRCz11 9 20523102
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAA
Long Flanking Sequence:
GGCAGGCCAGTCAAGTACCTGTATTCTTTTCCGCCATAGCCAGGACTTTGTAATGTGTGCAAAATGAGGTTTTTCATTGTCTTGTTTAAACATGCATGGGCGTCCCCCTGGAAAAGAAGACCCCCTATCGGCTACAAAAGCTCCAATTAATGGTGTAATGAAATCACTACTTTCTTATTTATTTGCGTGTCAGGTTTCCTGCGTTTAAACCGTCCTAACTTTTTCTGAATTGTGCTTGTATTAGTCGAAGAATGGTACAGTATGTAAAAAGAGAAATGTGTCTGAAGTCATAAGAGAGTGCGTAAGATGGAAACTTTACTATCCCGTGAGGATTTGTGAATTCCGATTAAAAGATATGAATGATTTCTGTTTGTAGCATAACATGGCAGATATAGGATATCTGTGTATTAACTCAGATCTGTGTGTTTATTTGAAGCTTTTTCAGCTCCCACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAACAGCAGCACTAGTTTTTTCAACATTGCAGGAATCATACATGTTTCTAGTCTGCTTCAAGACCCAGTAAAGGAGAATGAAACTTACCGATGTCTCATCCAGAACTCTCTTGTGGTCGCTGTCTCAGAAGCAACTGTCACAGGTAAAATAGTCTACAGTGGAAAAAATAAAAACGATGAAACCAATTATTAGGAAGGACTCACCCATATTAATAACATTTACACAGAGCACTGCATATCAAATCAGGTTTGTTTAAAAAAAAGATGTGATGACAGATTGGACACTTTGGACAAACAAACTGGTTGTGACTCATTAACTAGAATGACACATGTAGATCATGAGTTACACAGCACTATGTTTCTGTTATAAACTATTTCTTTATCTTTACTGTTTCTCAGCACACAAAGTGGCGCAGAGCACATACTTCATTTTCAATGCTGCATCTACAAAAA
Associated Phenotype:
Not determined