ZMP

SYDE2

Ensembl ID:

ENSDARG00000078537

Description:

synapse defective 1, Rho GTPase, homolog 2 (C. elegans) [Source:HGNC Symbol;Acc:25841]

Human Orthologue:

SYDE2

Human Description:

synapse defective 1, Rho GTPase, homolog 2 (C. elegans) [Source:HGNC Symbol;Acc:25841]

Mouse Orthologue:

Syde2

Mouse Description:

synapse defective 1, Rho GTPase, homolog 2 (C. elegans) Gene [Source:MGI Symbol;Acc:MGI:3036264]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa37800	Nonsense	Mutation detected in F1 DNA	Not yet available
sa15758	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa37800

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111658	Nonsense	172	597	3	9
ENSDART00000113956	Nonsense	176	602	3	8

Genomic Location (Zv9):

Chromosome 23 (position 45048704)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	43850166
GRCz11	23	46019572

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGCTAACCTGTCGCACATCGTTTCTTGACATGGACCACACCTTTAATATC[G/T]AGCTGGAGAACGCTCAGCATCTCAAACTTGTTGTCTTCAGCTGGGAGTCG

Long Flanking Sequence:

CTGCTGGCGTGACCACGGCTTTGGCCAGCGGAAACGTGATCTGGCGATACCATCTGGACAGCAGTGTTTCAACACAGCACAGTTTCGATAAGCGGAGAAGCAACAGTGCTGGAGTTCCCAAATCTGCAAGTAAAGGAGGATACCTCAGTGACGGAGATTCACCGGAACTTGTGGCCAAATCAGGCAAGCATACAAACTCTGAAAGAAAGAACTGCAAAACGCGGGATCCCAACGGAAACGGTGGAAGTCCCAAACTCCCCGGTACAGAGTTGGATATCGATGCTTTCCGTTCGTACAGTTTCACCGAGCAGCCAAAGTGCCTAACTTATATTTCGGGACTAATGAGTCTGCATTTCTATGGCGCAGAAGATTTGAAGCTGCCGCGGGTTGATTCCCGGGACATCTACTGCGCCATTCAGGTGGACTCGGTCAATAAAGCTCGTACGGCTTTGCTAACCTGTCGCACATCGTTTCTTGACATGGACCACACCTTTAATATC[G/T]AGCTGGAGAACGCTCAGCATCTCAAACTTGTTGTCTTCAGCTGGGAGTCGACTCCGCGACGGAACCGAGTGTGCTGTCATGGGACCGTAGTTCTGCCGGGATTATTTCGAGTCAGTAAAACACACCAGCTGGCAGTGCGTCTGGAGCCGCGCGGGATGATCTATGTAAAGCTGAGCCTGATGGAGCAGAGGCAGAACTCGCTGGACGGAGATCATCCCCAAATGCAGGTGTTCGGGGTGGAGGCGCGGCATGTGGTGGAGCGGGAGGCGTCCGGGCTCATGGTCCCGCTGCTCATCGAGAAATGCATCTCTGAGATCGAGAGGAGGGGTTGCCAGGTGAGTGAACGCAGTCTTTCATTTAACAGTAAAGTGTGTGCTGTGTTTCCATCCAAAGATGTGTATTAGATTCATGCGCAAACTTGCTTGAAACATTCGAGAATAAAGCAGCGTTTCTGTTCAAAATAGAGCACACAATCGTCCTGCTAAACTTGAGCAAGTATG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa15758

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111658	Nonsense	206	597	3	9
ENSDART00000113956	Nonsense	210	602	3	8

Genomic Location (Zv9):

Chromosome 23 (position 45048601)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	43850063
GRCz11	23	46019469

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TCCRCGACGGAACCGRGTGTGCTGTCATGGGACCGWAGTTCTGCCGGGWT[T/A]ATTTSGAGTCAGTAAAACACACCAGCTGGCAGTGCGTCTGGAGCCRCGSG

Long Flanking Sequence:

CAGTGCTGGAGTTCCCAAATCTGCAAGTAAAGGAGGATACCTCAGTGACGGAGATTCACCGGAACTTGTGGCCAAATCAGGCAAGCATACAAACTCTGAAAGAAAGAACTGCAAAACGCGGGATCCCAACGGAAACGGTGGAAGTCCCAAACTCCCCGGTACAGAGTTGGATATCGATGCTTTCCGTTCGTACAGTTTCACCGAGCAGCCAAAGTGCCTAACTTATATTTCGGGACTAATGAGTCTGCATTTCTATGGCGCAGAAGATTTGAAGCTGCCGCGGGTTGATTCCCGGGACATCTACTGCGCCATTCAGGTGGACTCGGTCAATAAAGCTCGTACGGCTTTGCTAACCTGTCGCACATCGTTTCTTGACATGGACCACACCTTTAATATCGAGCTGGAGAACGCTCAGCATCTCAAACTTGTTGTCTTCAGCTGGGAGTCGACTCCGCGACGGAACCGAGTGTGCTGTCATGGGACCGTAGTTCTGCCGGGAT[T/A]ATTTCGAGTCAGTAAAACACACCAGCTGGCAGTGCGTCTGGAGCCGCGCGGGATGATCTATGTAAAGCTGAGCCTGATGGAGCAGAGGCAGAACTCGCTGGACGGAGATCATCCCCAAATGCAGGTGTTCGGGGTGGAGGCGCGGCATGTGGTGGAGCGGGAGGCGTCCGGGCTCATGGTCCCGCTGCTCATCGAGAAATGCATCTCTGAGATCGAGAGGAGGGGTTGCCAGGTGAGTGAACGCAGTCTTTCATTTAACAGTAAAGTGTGTGCTGTGTTTCCATCCAAAGATGTGTATTAGATTCATGCGCAAACTTGCTTGAAACATTCGAGAATAAAGCAGCGTTTCTGTTCAAAATAGAGCACACAATCGTCCTGCTAAACTTGAGCAAGTATGAGCCAGAGAAATGTAGTTTAGTGCAGTAGGAGAAGCCAGCCACCTCAGAAGATGAAGACAAAAATGTATGTTTTACTCACCATCAACCATTTCTCTGATCTCA

Associated Phenotype:

Not determined