Busch Lab

ZMP

lrrcc1

Ensembl ID:
ENSDARG00000078535
ZFIN ID:
ZDB-GENE-041111-207
Description:
Novel protein similar to vertebrate leucine rich repeat and coiled-coil domain containing 1 (LRRCC1)
Human Orthologue:
LRRCC1
Human Description:
leucine rich repeat and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:29373]
Mouse Orthologue:
Lrrcc1
Mouse Description:
leucine rich repeat and coiled-coil domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1918960]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa19792 Nonsense Available for shipment Available now
sa39854 Nonsense Mutation detected in F1 DNA Not yet available
sa19791 Essential Splice Site Available for shipment Available now
sa32950 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa19792
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113498 Nonsense 109 997 4 19
ENSDART00000142366 None None 555 None 10
Genomic Location (Zv9):
Chromosome 2 (position 31425353)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 31726313
GRCz11 2 31709531
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGAACAAATGTGTATGAAGTCTCTGTTCTGTGGTTTTAGGTCTCTTGTA[T/A]CTTCATGGAGCAAACTACAAACTGAAGTACCTGCAGCTTCACAGCAATCG
Long Flanking Sequence:
AATGCGTTCATTCTTGAATGTTTTAAATTTAGATCTCTGAAAAATCTTACATTTAGGGGAAGAAATTAAAACTACAGTGCAGACGTTTGTAAATTCTCCAGATAAAAATTATTTTATTCTTACCAAGGATGTATTTATTTGATCCAAAGTTTCTACTCTGGTCCTTATTGCCACATGATCATTCCGTAATCATACTGTTATGCTGATTGGGTGCTCTAAAATTGACTTATTAAATAACTTCTATTACCAAGGGTCACAAAAGTTTTTCTGCTTATTTATTTGTTTATTCATTTATGTATGAATAGAAAATTTAAAGAAAACAACATTTATTTGAATTTGAAATGTTACGTAAAAAAAAAAACGTGTTTGCATTTGCACAATTTAATGTATCCCTACTGAATAATAGAATTTGAAAAATGGTACAGTATGGAACCGTAGCAAACATAATTATTGAACAAATGTGTATGAAGTCTCTGTTCTGTGGTTTTAGGTCTCTTGTA[T/A]CTTCATGGAGCAAACTACAAACTGAAGTACCTGCAGCTTCACAGCAATCGTTTGGATAGTATGAACCACTTACTGCAATGCATGGTGGGACTGCAAAATCTGAAATATATCACTCTTAGCAAGGACGGTGCAGAGAATCCAGTCTGCAAAATGATAGGTTTGTTGAAAAAAGTTTGCAAAATGATAGGTTTGTTGAAAAAAGTTATCTTGGAAAACAAGAAAAGATAAAACGTAATATGAACTGGTGTTCGAGCCCCGACTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCAGTGTTTGTGTGGGTTTCCTCTGGGTGCTCTGGTTTCCCCCACAAGTACAAAGACATCTGCTGTAGGTGAATTGGGTAAGCTAAATGGTTCGTAGTGTATTTCCTGGTCCTCCAAGATGGGGGTTGAGCGTTGGGCTAATGACCCATACGTCGAACCATCATAAAAATTTGAATGTTACAAACACCAAAATGGTGTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39854
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113498 Nonsense 216 997 5 19
ENSDART00000142366 None None 555 None 10
Genomic Location (Zv9):
Chromosome 2 (position 31423760)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 31724720
GRCz11 2 31707938
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTTGAGGACTTCCTAGAGTTTTTGATTTCATCAGACACTAGTGTGAAT[G/T]GAGAACTGGTAAACTAGTTTTACTATGCTTCATAATTTCCTGTATTTGTC
Long Flanking Sequence:
ACTAGGTTAATTAATTTAACTAGGCAGGTTAGGGTAATTCGGAAAGTTATTGTATAACAATGGTTTGTTCTGTAGACTGTCGGAAAAATATATAGCTGAAAGAGGCTAATTTGGCCTTAAAATTAGTTTTAAGAATTGATAACTGCTTTTATTCTTGCTAATATTAAACAAGTAAGACTTTCTCAAACTATAAAAAATCTCTTGCTCTGTTAAACAGTTTTTGCAAAATGTTTTTTTAAAAAAAGAAAAAAATCAAAGGGTTTTCAACTGTTTCTTTATGCACATAAATTCTGTAGGTTGATTTGTTAAACTTATTTATTGTTTTTCTTATTTATTAAGGCTACAGGGAGATGGTTCTTCAATGTCTGCATCAAGTCACTACACTGGATGGAGTAGATCGCATGGGAAACACATGTCCATTAGCAGAGGACAGTCCTATGGACGTTCCTGGTCTTGAGGACTTCCTAGAGTTTTTGATTTCATCAGACACTAGTGTGAAT[G/T]GAGAACTGGTAAACTAGTTTTACTATGCTTCATAATTTCCTGTATTTGTCTGTTTTTAAATGAGAGAATGACGTTTGAATGATTTTGAGTTGGTAGTGAGACACATGCTGATGTTCAGGGTGTTTTGCTGTTATAAAGGCAAAGTCAGATGCTCCTCTAACTACTCCACGGATTGATGAAGTCTTGACCCAGTTTCGACAGCGAGGTGGAAAAGCGTCTACAGAAAATCAAGAGAATGAGCAGCGAATTAAAAAACTTGAGCAGCAGGTTTCCCATTTAATACAGAAGGTACATTTCTGTTCTCAAATATTTCAATATTATCTCTTTCTTTACTTTCTTTTAAAAGCCGTTTTAACGCATTTTAATCTTTTTTAAAATCTTTTTTTCCCTTTATTTTCATTTTCTTGTACTTGTATTTTGTTTCTTTTATTCTTGTTCATGTAAAGCACTTTGAATTTCCACTGTGTACGAAAAGTGCGATATAAATAAACTTGTCTTGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19791
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113498 Essential Splice Site 443 997 9 19
ENSDART00000142366 None None 555 None 10
Genomic Location (Zv9):
Chromosome 2 (position 31419151)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 31720111
GRCz11 2 31703329
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAGCGAGGAAAAAGACCTGCAGAGTTTGGCCTTACACACCACAGACAG[G/A]TCAGGACAAACAGACAAATGCAGTTTCACTTTGTTCCAGTTGTTACCTTT
Long Flanking Sequence:
CACATTACTGTATATATGTAGGCATTATGTTAAACTGCCTCTCTTACTGGGATGAAACTTCTGCTAATATGAATTGTTTTTTATGTATTCATTGCAGTGTGGCAATTACACAGAAGCAGAGGTCCACAAAGCTGACTGTTTGTCCCCGTAGGAGTACATCAATCCAGAGCTCGGAGTCTGCTGACACTTCAGAATCTGTCAAAAGGGGCCCCAAAATAATCAAATCAGGCCTCAAAAGCTCAGGCCAATCGCAAGAGGAAACTTACAAAGTATGCAAACTGCACTGCTTAGGTTTGCCATTAAACTAAACGTGAATATTCAAAGAATAACTGCTTATGTGTTTACATGCAGGCAATAGTGGAAGAAAGAGACCAGGAGCGAGAGCGGCGCTGGAAAGCAGAGCAAGCTGCGAAAAAGCTTACTGAACAGGTCAAGAACTTGCAGACTCGAGCCAGCGAGGAAAAAGACCTGCAGAGTTTGGCCTTACACACCACAGACAG[G/A]TCAGGACAAACAGACAAATGCAGTTTCACTTTGTTCCAGTTGTTACCTTTGTGCTGAAATGAATGTGAATGATATGAATGCAAATTAAGCAGCCTAATTAAGAGTTCCACCGCTGACAGTCAAAGTAATATATATAGTTGCAACTTTTATTTTATCTCTCTCGTTAAAACATTCTCTCCCATCAAGGACACCTTAACATTCTCCAGCCATCCAAGTGTTTGCGGAGAATGTTTGGTTTGACATATTGCACCTAATTGGTGTCAGCTCTAGCTGAAATGTTGGATCGGAATACACTCGAGTATAATTAAATTTTATTAGAAGTTTCCAGAGACCCCACTGTAGGGCCCTGATGTATGAAGCTCCGCCATCCCACCTGCACGGCGCTTTGTGTGGTGTGATGATGGCCCTGATATTTTGCTCTAATATTATAGCCCACGCGCTCCCCCTGGTGATAAATCGTAATTATAATGGAGATTAAAGTCGTGGTGACAGGCACATGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32950
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113498 Nonsense 605 997 12 19
ENSDART00000142366 Nonsense 163 555 3 10
Genomic Location (Zv9):
Chromosome 2 (position 31414206)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 31715266
GRCz11 2 31698484
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAAACAGACTGATCTTGAAGAAAAAATCAGGGATGCCAGAAGACAGTA[T/A]GCTGCTCTGGAGGAGGAGTTTCGCATGGCTCTCACTATTGAAGCAAAGCG
Long Flanking Sequence:
ACTCAAGCCTAGATAAACTTAAACATAAGTGGAAAATGCTAATTGTTGTAATCTCATTAGAAAATTTTGTGGCCAATAAAATGCAACCTGGAGCACGCATATTATTGATTTTGTGTGGATCGTCAGTGTTTTCTTTGGATTGCCCTGTCCTTCACTGTGAATCTACAATGACAGTATTTAGAGTGAGGAAACAATGGTGTTTGTGTGGCTCATGGTAGGTCTTTTTCCATGTACCGATTGTATTATTCTGCTATGCCTAGGTATACCCAGATTTTCATTCTATGGCACCTATTAGAGTGAAAATGGCTCAAATTACAAAAGAAGAAATGTGTTAATTTGCACCTGTTTAACTGTTACAGGAAAGAGCTTTCTGCACGATTGCTTCCTGGTGGAACTGAGTTTAAAGAGGCTGTAGCCAAAGAGGTTGCTGCAACAGAGCAGAGATTTGCTCAGAAACAGACTGATCTTGAAGAAAAAATCAGGGATGCCAGAAGACAGTA[T/A]GCTGCTCTGGAGGAGGAGTTTCGCATGGCTCTCACTATTGAAGCAAAGCGTTTTACAGAGGTAACATTTAAACTATGAGGAAACATAGTCTGAACATAGTCTTATTTATGATTTTGTGACAGTAAGTTTTAGTTTTCTAATTGAATCCTCAGAGCAGAAAAATAAAAGTAAAAAAATTACAAAATAAAATAGTATTATTGATATAACAATTTAAACTTGCTTTTACCAATTTTTTTCTACATTTTTTCACTTTTTAGATTTTAAGTTTAACTTTTAATTGACTCTCCAAAACAAAAGCAGTTAGAATATTTTGTAATTTTGTTTAGTAACTTTCTTTAAAGTAATTTTTTATGTTTTTCATCTAATATTTGTATTTTGTTTCTTATTTAAAATGTCATTGGGCTCTATTTTGACAATTAATACCCAAAGTGCAGGGCGCAAAAGCATTAAGGTCATGTCAGAATCCACTTTTGCTATTTTAAGGATGGAAAAATACACTT
Associated Phenotype:
Not determined