ZMP

lrrc3

Ensembl ID:

ENSDARG00000078415

ZFIN ID:

ZDB-GENE-080327-13

Description:

Leucine-rich repeat-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:A8WHP9]

Human Orthologue:

LRRC3

Human Description:

leucine rich repeat containing 3 [Source:HGNC Symbol;Acc:14965]

Mouse Orthologue:

Lrrc3

Mouse Description:

leucine rich repeat containing 3 Gene [Source:MGI Symbol;Acc:MGI:2447899]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa1581	Essential Splice Site	Available for shipment	Available now
sa21556	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa1581

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113408	None	None	266	None	1
ENSDART00000142888	Essential Splice Site	None	266	1	2

Genomic Location (Zv9):

Chromosome 9 (position 43230665)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	42355835
GRCz11	9	42157622

KASP Assay ID:

554-1524.1 (used for ordering genotyping assays)

KASP Sequence:

TTACTCTCACTGCAAAGGCGACTCGTGCACCCAACTATCAACAAGTATGG[T/G]AAGTCATTGTGATACGTACTATTTATATTACAAACGCCGCCTTAATCACT

Long Flanking Sequence:

ACCTTCCAGGTTTCAGTTGCAACCCATATCAAACACATCTGCCAGTAATTACCAAGTGCTGTTCAGGTCATATTTAATTGGTTCAGGTGTGTTTGATCAGGCTTGGAGTTAAACTTTGCAGGAAGGTAGATCTCCAGGAACAGGCTGCTCTTATATAAAGTAAATCGTTCAAAACAACTCTCACTTGACTCCAGCTTGATATATTGTGCATCACCTACAGATCACATCACTGAACAGCTGGCGAATCTATTTAGTGAACTGTTTCCAAAAAGTCCACTAAACGAACCAATGAACAGATCTTTGGGTGAACCGATTCTAAAGATTCGAGTCACCGGGACGAATCGAAATCCCCACCTCTATCACAGTCAGCGAGATGCAGGTGGAGCGCGCGCACCAGCCTCTCCAATGAGCGCAGGGCGGCGGTCTTATATTTGCTTTGGCTCTTCACGTTTACTCTCACTGCAAAGGCGACTCGTGCACCCAACTATCAACAAGTATGG[T/G]AAGTCATTGTGATACGTACTATTTATATTACAAACGCCGCCTTAATCACTTGAAACCATACATAAAACGCTTAAAGTTGTAACTCATTGAGGAAAGTAATGGGTTATGTCTTACGTTGTCTTTGTTTGTTTGTTGCCATTCTATTTCATTGATATTTTAGTTTATTTTATGTTTTAAGTCATCCGTTTGAGCAGTGATTAAGTTAACATTCATGCCTCGCCAGCATTTTTTAATAGTAGAAAGTGTACATTTTTTATTTAATTTCTCAATGTTTCTCAAGCGAAATAATTGAGATTAAATTGGTTGTATCTATTGATTAAAGAGCTGTGTTCGGATTTGTTTGGAAACGGCTCTAGCCTATTTCCCCCACGCTATCTCTAAATAGGGGGACTCTTTAAAGACTCTGTTTTTCTTATCACTTTAGCGTTTCTTTCTTGGACGCAGTCAGTTGTTTTCAAAGCGTTTGGTCCAGTCTTAAAACAATAGCCGTCCTATGCCGC

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

sa21556

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113408	Nonsense	101	266	1	1
ENSDART00000142888	Nonsense	101	266	2	2

Genomic Location (Zv9):

Chromosome 9 (position 43237288)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	42362458
GRCz11	9	42164245

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AATACCAAACCAGGCTTTCAAAAACCTGCCCTGGCTCCAAGAGCTGGACT[T/A]GTCGAGGAATGCTATTGAAACCGTGGACGCTGGGGCATTTAAGGGTGTCA

Long Flanking Sequence:

AGGAAACTCACAATGTCTTCAAACACCTGAGAATTAAAACCACTCGTCTACACGTGTTCACGGGGTGTTAATAAGGGAAAACTCCCGCTGTTGGAACGACACCCTGACCTGTAATGTTTATTCATTAATTTTTTTCCGATATGGCATGGATTAATGATGACTGCCCTTGAACTGTAGAGCATTCCGAAAGTAGCTGGACATGACTTTCCCTGCAGGGGCTTATGTGTTAAGGAAAGTCTTCATCCCTCATGGCTGTCCCCTTATCTTCAGATTGCTTTTAGCCGTGATTTGTCTGAGCGTGCCGAGTTTTGCTTGTCCCAAGAGCTGCCACTGCTCTGAGAGGAATAGCTTAACAGTAGTGCAGTGCTCTTCTCGAAACCTAGAAGAAATTCCTCCTGACCTTCCGCACGATACTGTGTCGCTTCAACTCTCCTCCAATCATATCACCAAAATACCAAACCAGGCTTTCAAAAACCTGCCCTGGCTCCAAGAGCTGGACT[T/A]GTCGAGGAATGCTATTGAAACCGTGGACGCTGGGGCATTTAAGGGTGTCAGCGAGAGCTTGCGGACGCTCGACCTGTCCCATAATCACATGCAAGGTGTCCCCAAGGAGGCCTTTGCTCGGCTTCATGCCAAAATCAGCCTGTCTAATAATCCGTGGCACTGTGAGTGTACTCTGCAGGAGGTTTTACGTGAACTTCGCCTGGACCCTGAGACGGTGAACGAGGTGAGCTGCCACACCTCCGATCAAGAAAAGTACGCAGGCAAACCTGTCATCCAAGTCTTGGATTCAGGCATAAACTTTTGTAACTTCCACCATAAGACAACTGATGTTGCCATGTTTGTTACCATGTTTGGTTGGTTCACAATGGTTATTGCTTATGTCATCTATTACGTACGGCATAACCAGGAAGATGCCAGGAGACATCTGGAGTACCTCAAGTCTTTGCCAAGTAGCTCTCAGATTAGTAAGGACTTTGACACAATCAGCACTGTTCTCTAGC

Associated Phenotype:

Not determined