ZMP
B0V3M3_DANRE
Ensembl ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:B0V3M3]
Human Orthologue:
CHPF
Human Description:
chondroitin polymerizing factor [Source:HGNC Symbol;Acc:24291]
Mouse Orthologue:
Chpf
Mouse Description:
chondroitin polymerizing factor Gene [Source:MGI Symbol;Acc:MGI:106576]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa18938 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa18938
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113847 | Essential Splice Site | 99 | 768 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 9 (position 11539025)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 11291590 |
| GRCz11 | 9 | 11262793 |
KASP Assay ID:
2260-1552.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAATCCCGTATAAACCAGTCAAACAGACTCAGCCCAAGAAACTTTTCAG[G/A]TAGAGTATAATAAAACCCAAGGAATGACTCCATTCCGTTGATGTAACAGT
Long Flanking Sequence:
CGTTCTGTTTTCTGTGGGAGGAGCGACAGGAGCCACTGACACGTACGAATGCCTCAATAATTTGCAGGAAGGTGATACAGTTTCAGGAAAGGATAACATTCAATGCGTTTCCGCTAGTATTTGAACCGCTTTCTTGATGTTCGCTACTCTGCCGAGAAGGTCGCGCTTAAAGGAGGTGTGCGTCGCACCAGCAGTAGGGGTACAATGAGGTTCTCTATGTTGATCAGTCTGTTAAGGCCGATCGGCCCGGTTATTATCGGGATTTCGCTGGGATTTACTCTGAGTTTGCTGAGTGTGAGCTGGGTTGAAGAGAGCTGTGATGTTAATGCCGTAGGAGACGAAGGAATCGCTTTAAACCAGGATGGAAGTCTGAAAGGAGCCCGAAGACCAAACTCTATTTCCACTGGGAATGATGGTGAGGAGGAGGAGAAGGAGGATTTCCCGCCGAGAATAATCCCGTATAAACCAGTCAAACAGACTCAGCCCAAGAAACTTTTCAG[G/A]TAGAGTATAATAAAACCCAAGGAATGACTCCATTCCGTTGATGTAACAGTTTTAGAGGTGCTTGATGTTTAGTTTTAAAACACTGTAGTGTACCTTACGTGCAGTGGTCGAAGATGAGGATGGGTTATCAAAACAACAATAGTATAAAGTACAACTATTTACATAAGAAACTAGAGTGTATCTTGTTCTAAGCAAAAGGTATGCCGAAATGTCATGGCAATAGTGTGTATAACAAAAATAAATGAATAATTTCCTTTAGTGGCATATTGAGAACATGTGAGCAATTCCAGCGTTCTGGATGTGACATGTTCAGTTAAAACTCAAAACATAAATACACAGAGAAGGTATATGTTAGCATTAGATTGAAACATCTCTTTATATTTTCCAAAAGAACTAACCACAGAGTTATAGGATCAGAAAAATGTTTTTCTGTAAACTTTTTTTTTTTTAATATTTTAAATGAGGAAAATAAACATGCCTTATGGATGTGACAAAAAAAA
Associated Phenotype:
Not determined