ZMP
TRAF2 (1 of 2)
Ensembl ID:
Description:
TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]
Human Orthologue:
TRAF2
Human Description:
TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]
Mouse Orthologue:
Traf2
Mouse Description:
TNF receptor-associated factor 2 Gene [Source:MGI Symbol;Acc:MGI:101835]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31413 | Essential Splice Site | Available for shipment | Available now |
| sa40355 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa808 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa31413
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000022729 | Essential Splice Site | 122 | 500 | 3 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 5653370)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 5192616 |
| GRCz11 | 5 | 5684886 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGCTTCAATGAGGGCTGCTCCTGGAAAGGCAGCATTAAAGACTATGAG[G/A]TTGTGTGTTTATTAACACAGTGATATTACCAATCATATAGTGCATAAGGT
Long Flanking Sequence:
TTCATTCCGCTGTGGCAACCCCGGATTAATAAAGGGACTAAGCCGACAAGAAAATGAATGAATGAATGAATCTTTGAGACATACACATATTTTTTTGTATTTTATATGGTGTATATGTATATAAATTGCAAATTTTAACACTCAAACTACACCACCAATACTCAAACGTTATTAAAGCTAAAATGTGGATGTCAAACTATCAAATCTGTGCTCTGATGTCATGTCAGATCTGGACCACAGAAATGTAATGCCTGCATCAAAGAGGACATCTTCGAAGAGCCCACGTCAATCCTCAAACAAGGCTGCGTAAGCACAAAAATCATCAGATATGAACATTTGAATATGATTTAAAGCCAAACCTTAAACTGCAGAGCTTGCACTTTCCATGTGTTTTCCTGCAGGCGTTTCCCGACAATGCTGCCAGAAGAGAAGTTGAAAATCTTCCAGCCGTGTGCTTCAATGAGGGCTGCTCCTGGAAAGGCAGCATTAAAGACTATGAG[G/A]TTGTGTGTTTATTAACACAGTGATATTACCAATCATATAGTGCATAAGGTATGTCTTTGTGAATGGAAAATGTCTTCAGAGAGTCAGAGATCAAGTCAAGTTAGGTCGCTGTCACGGTTGGCAAGGAGGACTCAAACGCAGAATAGACAGGAGAACACAAGGTTTATTTACAGGAGGTAAACAAGGCAACGCAGAAGGACAGTCCGCACAATAGTGAAGGGTGATGGCAGGAGAACAGGCTGGTGAGGGGAGGAGACTCAGGACTTCAGGATGATACAGAGGGGAGTGTCTTATGGGGAGTGAAACAGGCTGGTCGGGAAAGGGGAAATTCCAAACTTCAGGCCAAGCAGTCAATAAGTAGCTAGCCGAACCTCCGGTTTGGGACAGGGGTGGCAAACAGATGGAACATCAATCAAGTGAATCCACAACCAGCGAAGAATCAGGAGGCAAGTGACAAGCAACACAACAGGAATAGACAGCTGGGGAGACAAAAAAATTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40355
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000022729 | Essential Splice Site | 319 | 500 | 8 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 5658507)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 5197753 |
| GRCz11 | 5 | 5690023 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCGACAGCACAGACTCGACCAGGACAAAATAGAGGCACTCAGCAACAAGG[T/C]GTGTGTGCTGTACTGTACTTCAGACGAGATTTACACATGGACAATTCAAA
Long Flanking Sequence:
CGCCTGTGCCCACGAGCACCTGAACCTGCTGCTGCACTACATCATGGGTATGAAGGTCAGCCTGGAGGGTCTGCAGCCCCAGAGCCTGGATCTGGCGGGCCACAAAGCACACGAGCTGCACCAGGCGCTGCGGGACCTGGAGACACGGGTCAGTCAGTTAAGTGGAGCTCCCGTGCAGGGGGTCCCGTCCTCGTCATCTTCCTCCTCTGCCTCTTCATCCGCCGCTCCGCCTCCGCCTGCTCCCACCGCCACGCTGCCCACCTCCTTCACTCCTCTGCCCAGCTCAGTGGGTGCTGCTCTGGAATTGCAGCTCCATAGCGAGAAGACCAAGGTGGCGGACCTGGGCCGGCGCTGTCAGGACCTGGAAGTGAAGGCCGGGACGTTTGAGGACGTTGTGTGTGTGCTGAATCGAGAGGTGGAGCGCTTCGCCACCACCATGGAGGCCAGCAACCGACAGCACAGACTCGACCAGGACAAAATAGAGGCACTCAGCAACAAGG[T/C]GTGTGTGCTGTACTGTACTTCAGACGAGATTTACACATGGACAATTCAAAATAGATAGATAGATAGATGGATAGATAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATAGACGGACGGACAGACGAACGGACGGACGGACGGACGGACGGAAAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAATAAAATGATGGATGGATGGATGGATAGGTAGAACGATAGAATGATAGATAGACAGATAGATGGACAGACAGACAGACAGACTGATAGATAGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa808
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000022729 | Essential Splice Site | 428 | 500 | 10 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 5660746)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 5200005 |
| GRCz11 | 5 | 5692275 |
KASP Assay ID:
554-0713.1 (used for ordering genotyping assays)
KASP Sequence:
TCATGAGAGGGATGAGCGACGCGCTGCTCAAATGGCCCTTCAACCAGAAG[G/A]TACATCACTGTTGATTCATTGCATGYRTTAAATACTSTTCAAAGCTTTTA
Long Flanking Sequence:
TTTTTTGGCTTTGCTATAGATCACAGATCTTTTATGAATGCCACATAGTTACTCAGAAGGCCTCACCGGTGTTATTTCTCTGTTTGTCTCCTCCAGGTACGTCAACTGGAGCGTCAGGTTGGTGTTAAAGACCTGACTGTAGCAGAAATGGAGGGCCGACTGAGAGAAATGTCTGCAACCACGTTTGACGGCGTCTTCATCTGGAGGATTTCAGACTTCACCAAAAAGAGACAAGACGCCATTGCTGGACGAGCACCTGCCATGTTTTCACCTGGTAGAAAACACTCCATAGAAATAAAGATGACAGAGTCAGTGGTTTACTGTCACTAATGTTCTTCTTGATTTTTTCAGCATTTTACACAAGTAAGTACGGCTATAAGATGTGCCTGCGCATTTACCTGAACGGGGACGGGACGGGGCGCGGGACGCACCTCTCGCTGTTCTTTGTGGTCATGAGAGGGATGAGCGACGCGCTGCTCAAATGGCCCTTCAACCAGAAG[G/A]TACATCACTGTTGATTCATTGCATGCGTTAAATACTGTTCAAAGCTTTTATGAAAGGACAAGTAATTTTAAATGTGCAGTATATAGTACACTCTCAGATATAAAGATACAGGATCTGTCACTGGGGCTTTTCAAAAGGTACATATTTGTACCTGAAGGGTCCATAATGGTACCTCAAAGGTACTTTTTTAGGTACATTTGGGTGCAAATATGTCTCTTTTAAAACGGTACTGCCCCAGTGACAGCTTCTGTGCCTTTATGTCTGAGAGTGTATAATAGTAATGTGACTCTTTTAAGATTTTAACATATAAATTATATATATATATATATATATATATATCAATATTCATATATTAATAGCATATTTTTTTGTAATTTATTATAAATGCATTTTCAAGAGTTCTCACTTTGCTGATGATTGATTATAAAGCTTGTTTGGCATGCTGTCCCAGGAGAGAGCCTTGAGCTCAAAAGATCCTCGAGCCTGGGGCTCCCTCCCGT
Associated Phenotype:
Not determined