ZMP
si:ch211-288h2.6
Ensembl ID:
ZFIN ID:
Human Orthologue:
TMOD1
Human Description:
tropomodulin 1 [Source:HGNC Symbol;Acc:11871]
Mouse Orthologue:
Tmod1
Mouse Description:
tropomodulin 1 Gene [Source:MGI Symbol;Acc:MGI:98775]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19446 | Nonsense | Available for shipment | Available now |
| sa39566 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa19446
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111485 | Nonsense | 4 | 356 | 1 | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 11527858)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 11544687 |
| GRCz11 | 1 | 12231487 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTTCTATCCCCTCCTTCCCCCTTTTTGTCATTCATCATGCTTCGT[A/T]AAGAGATGGAGAAGTACCGGGATGTGGATGAGGATGAGCTTTTGCAGAAG
Long Flanking Sequence:
CAAAGAATCTTGATGAACTCTGGGAGTCCTGCAAGAACGCTTTCTTTGTCATTCCAGATGACTTTATAATAAGTTATTTGAGTCATTGGAGAGATGTATGGATGCAGTCCTCCAAGCTCATGGGAGTCATACACAATATTAATTCTTTTTCCACTGCACCATGACTTTATAATCTATACTGCATATACTGCTTTATATTCTATTGTGGTAAAATAAGTGTAATCTAGAGGCCTTTGCCTTTCATATAAGCCTCCTCTGATACCAAATGATCAACTAAAAATCAAGTTATTATTTATTGTTCCTAAAACCTGGATAGGCAACAAGACGTTTGTCAGGTGTAGCGTACATGAACTGTTTTGAACAGGCCTATTAATGTATCTGTTTCTCTTGTCCTCTCTAAGGTCTTGTGGTTCGGGGGCTGAACAGTTCCTGCTTCTTTCGTTTCTTCTCTTTTTTTTCTATCCCCTCCTTCCCCCTTTTTGTCATTCATCATGCTTCGT[A/T]AAGAGATGGAGAAGTACCGGGATGTGGATGAGGATGAGCTTTTGCAGAAGCTCAGTGAAGAGGAGCTCCGGAGACTCGAGGATGAACTTGAAGAGCTTGATCCTGATGTAAGTGCACTTGAAACACATCTCAGATTAGACCTTAAGAGCTTCATTAATTCCCACACAATTCATGTGCACGTACAGCTCAGTTGTCTCTGAATGCTGCTTTAAGAAAGGTTCATAAATGCCTATACTAAAGCTCCTTTTCTTTTCTGGAAATTGGGTATTTGTACTGAGTTGTAACATAAAGGAAGCAAGTTGCATTTTTAGTTTATTTATTTTTGATTTTTTAAATTATTATTATTATTATTGTTTGGTGTTGGAAATTGTTTCAGTCCCTTTTTTATCAAATAAATGTGAATGCCCTCAACAGTGGACTCTGCATGGTCACCATCCAAGTTAAATGCAAAAAATTAAGTAGCAGCATGTAGTGAACCCCCACACACACCCAAAAACCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39566
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111485 | Essential Splice Site | 338 | 356 | 8 | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 11548124)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 11564953 |
| GRCz11 | 1 | 12251753 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCCCACGCTTGCGTGGATCCAATGCTATGATGAACAACAACGACATGGG[T/A]AAGAAGTACACTCACACTGAGAAATAATTTTTAGAGCTAATTTTGGAGAT
Long Flanking Sequence:
TATTGTGTAATGGTTTGCAGGCACTGGCAGAGATGCTAAAAGTGAACACGACTCTGAAGAGTCTAAACGTGGAGTCAAACTTCATTACTGGAGCTGGAGTTCTGGCTCTCGTGGAAGCCTTAAAGAGCAACACTACACTGCAGGAGCTAAAGATCGACAACCAGGTACACACACACACACACACACACACACAAACACACACACACACACACACACACAATAATAGTGCAATTTTAGCCGTTGTCCATTAGGTCAGGGCTTCAGCCTAAATATACTGATAATGAATAGGTGATTGAAGGAATTAAATTAGTTTTGTTTGTATTTCCTATGTGTGCTTGTGTGTGTGTCATGCAGAGCCAGCCATTGGGTAACAAGGTTGAGATGGAGATAGCTAATATTTTAGAGAAGAACACTACTTTGCTGAAGTTCGGGTACCACTTCACCCAGCAGGGCCCACGCTTGCGTGGATCCAATGCTATGATGAACAACAACGACATGGG[T/A]AAGAAGTACACTCACACTGAGAAATAATTTTTAGAGCTAATTTTGGAGATTATTGAGTGATGAACTGTTAATACATGCATGTTTGAGATTTGGAAAATATTTTACTGAAAAAATTGAGGCTTAAAACAGTAATATTGTGACATATAGACATCATTTTTACTTAACTGTTTCTTATATTAATATATTCTAACTTTTATTTTGTTCCTGCGATCCAAAGCTGGATTTTCAGCACCATTTCTCTAGTCTTCAGTGTTAGATGATCCTGGAGAAATTGTTTTGAAATGCTGATTTCAACTATTCTGTTGCTTAATATTTTAGAGACAGTGGTTTTTTATTTTAGGATGTATATATCTACAAAGAAGTTAAGAGAAGTGTTTTCTGAAATAAAAATGTAACCCTTGTGTGCTCTTGGAGATGTTTCCATTATATTGAATTTAACATTTAAATTTCCTACCCTTTCGCTATATTCGGGGCTGTTTTTGCAACATTTTTTGTTTGAT
Associated Phenotype:
Not determined