ZMP

si:dkeyp-68h1.1

Ensembl ID:

ENSDARG00000078226

ZFIN ID:

ZDB-GENE-070912-673

Description:

cadherin-12 [Source:RefSeq peptide;Acc:NP_001153302]

Human Orthologue:

CDH12

Human Description:

cadherin 12, type 2 (N-cadherin 2) [Source:HGNC Symbol;Acc:1751]

Mouse Orthologue:

Cdh12

Mouse Description:

cadherin 12 Gene [Source:MGI Symbol;Acc:MGI:109503]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa32932	Essential Splice Site	Available for shipment	Available now
sa19782	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa32932

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087446	Essential Splice Site	544	800	9	11
ENSDART00000138733	Essential Splice Site	544	800	10	12

Genomic Location (Zv9):

Chromosome 2 (position 28822188)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	29123823
GRCz11	2	29107356

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAATCTTCACAGACCAGGAACAGAAACTTTACCATCAGGGACTATGGAAG[T/C]AAGTTAGAGAGTTTTAGAGAAAATATAAATATACTAAATAACCTAATATT

Long Flanking Sequence:

AACATGAAAAGAAAATGAATGAATGAATGAATAAATAATCAATGATGAAAAGAGATAATTTTTTGCAGACTTAACATAAAGAGAATAGAAAAATGTATTTCTTCTCTGCTCTGCTAATGCTGTCATTCTCTCATAATACTTGACTTTGTCTTCACGCGTGTATGGAGTTGACAGCGCAGCAGTCATAAATGACGCCCCATGTGGTTGAGTCATAAAGACAGTAAAAAACCTCAAATGATCCCTTTGAGGTTCGATGAGAAGAGCGCGTCAGCTCTGTCAATCAAACAGACTATTGCTGTCGTTTGAACACTATAAGTGCATTTACAAAATCTGCATCTCTTTTCTGTGGTGTTTTATTCAGAGGACTGTTCTGTTTCTGTTCTCTAGGTGATTCAGATCCTCAGTGCCACAGACAAAGACGTGCCTGCTGTTGAGCACCGCTTCTACTTCAAATCTTCACAGACCAGGAACAGAAACTTTACCATCAGGGACTATGGAAG[T/C]AAGTTAGAGAGTTTTAGAGAAAATATAAATATACTAAATAACCTAATATTCTGATGTTTTCACATATCCCTATCAAAGTATGTTCACAGTCACACTTACACTCACCGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAATGCAAATTTCTATTCTACCAATCACATGACAGCAACTCAATGCATTTAGGCATCTAGATATGGTCAAGACGATCTGCTGCAGTTCAAACCGAGCATCAGAATGGGGAAGAAAGGTGATTTAAGTGACTTTGAACATGTCATGGTTGTTGTTGCCAGACGAGCTGGTCTGAGTATTTCAAAAATTGCTGATCTACTGGGATTTTTACACATAATCATCTCAAGAGTATACAGAGAATGGTCAGAAAAAGAGAAAATATCAGGTCAGAGAAAAATAGCTAGACTGGTTTGAGCTTATAAAAATGCAACAGTAACTCAAATAACCACTTGTTACAACCGAGGTATGCAGAAGAGCATC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa19782

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087446	Nonsense	659	800	11	11
ENSDART00000138733	Nonsense	659	800	12	12

Genomic Location (Zv9):

Chromosome 2 (position 28831298)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	29132933
GRCz11	2	29116466

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACACTCTGATGTCGTCTAAAGAGGACGTCAGGGACAATGTGATCCACTA[T/A]GATGATGAGGGGGGCGGGGAAGAGGACACCCAGGCCTTCGACATAGGTAC

Long Flanking Sequence:

AAACTTGAAATGTTAGGCATAATTCTTGCAGCAGTGTCTATTTCTCTCTCTCTATCATATCTTTCTTTGAGTAAAGCGAACGTTGTCTGCCTCTGAGGAGGGAGATGAAAGCTCAGAAAGAAAAAAAAAAAAACCTCCCTTCCTCTCACACAACCCAGCACTACGATAGTGACAGACAGCATGTCAAAACTGCATTATGGCTACCCTCGGGCTGCCATTCTCTTTAGTCCCATTTTGAAAAGCCACGTCAGAACAACAGCAACAAAGAAAAATCAGCTAATGGCTCCAGAACATGTGACCACCCTTTTTTCCCCTCACTAGTTTGTTGTCACTTAAAGATAGTACTGTATGTATGTCAGGTTGCATTACGCGACATAACAAATCAAGTGCCTGTGGTGTCTTTCAGTGATGGTGGTGCTCTATATGGGCCTGAGAAGACACAAGAAGAAGGACACTCTGATGTCGTCTAAAGAGGACGTCAGGGACAATGTGATCCACTA[T/A]GATGATGAGGGGGGCGGGGAAGAGGACACCCAGGCCTTCGACATAGGTACGTTACGCAATCCCAAAGGCATCAAAGAGACGGGGCCGCTGCAGAAAATAAGATCAGAGGACAAGGCCGATCAGGCTAGCGCGGCCGAGGACAGCGAGGACATCCGAGCTTACATCCATCATTGTCTTTTGGAGAGCTCCACACCTCCGTATGACTCCCTGGTCACATATGCATATGAAGGAGACGGTTCGGTGGCCGAATCACTTAGTTCTATTGAATCTTGGGTGCTCGAGCCCAAGGAGGATTACAGAAATCTGTGTGACTGGGGTCCTCGCTTCAAAACACTGGCTGGGATATTTAAAGAGCATGAGGGTAAGGAAAAGGAGAAAGTGGAAAATGAAGCACACGCTGAGGCACTACAGGACAGGCTGGACTGAGAGTATTTTAAGGAGCTCTGTGAAATACAAAGTTTATTTATTTCAGATGTGGCACTTGAAGGGATTGTTCACTT

Associated Phenotype:

Not determined