ZMP
zgc:193751
Ensembl ID:
ZFIN IDs:
Description:
hypothetical protein LOC100170818 [Source:RefSeq peptide;Acc:NP_001124125]
Human Orthologues:
PCDHB1, PCDHG@, PCDHGA1, PCDHGA10, PCDHGA11, PCDHGA12, PCDHGA3, PCDHGA5, PCDHGA6, PCDHGA7, PCDHGA8
Human Descriptions:
protocadherin beta 1 [Source:HGNC Symbol;Acc:8680]
protocadherin gamma cluster [Source:HGNC Symbol;Acc:8695]
protocadherin gamma subfamily A, 1 [Source:HGNC Symbol;Acc:8696]
protocadherin gamma subfamily A, 10 [Source:HGNC Symbol;Acc:8697]
protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:8698]
protocadherin gamma subfamily A, 12 [Source:HGNC Symbol;Acc:8699]
protocadherin gamma subfamily A, 3 [Source:HGNC Symbol;Acc:8701]
protocadherin gamma subfamily A, 5 [Source:HGNC Symbol;Acc:8703]
protocadherin gamma subfamily A, 6 [Source:HGNC Symbol;Acc:8704]
protocadherin gamma subfamily A, 7 [Source:HGNC Symbol;Acc:8705]
protocadherin gamma subfamily A, 8 [Source:HGNC Symbol;Acc:8706]
protocadherin gamma cluster [Source:HGNC Symbol;Acc:8695]
protocadherin gamma subfamily A, 1 [Source:HGNC Symbol;Acc:8696]
protocadherin gamma subfamily A, 10 [Source:HGNC Symbol;Acc:8697]
protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:8698]
protocadherin gamma subfamily A, 12 [Source:HGNC Symbol;Acc:8699]
protocadherin gamma subfamily A, 3 [Source:HGNC Symbol;Acc:8701]
protocadherin gamma subfamily A, 5 [Source:HGNC Symbol;Acc:8703]
protocadherin gamma subfamily A, 6 [Source:HGNC Symbol;Acc:8704]
protocadherin gamma subfamily A, 7 [Source:HGNC Symbol;Acc:8705]
protocadherin gamma subfamily A, 8 [Source:HGNC Symbol;Acc:8706]
Mouse Orthologue:
Pcdhb1
Mouse Description:
protocadherin beta 1 Gene [Source:MGI Symbol;Acc:MGI:2136730]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35623 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa14087 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa35623
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112958 | Nonsense | 134 | 802 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 14 (position 2920274)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 2113631 |
| GRCz11 | 14 | 2031982 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGATCGGTCTTAGGGTTCAAGATATTAACGACAATAATCCATATTTTGGT[A/T]AAGACTTGATCAATTTGGAGATCAGTGAATCCGCCGTTAAGGGCAAACGC
Long Flanking Sequence:
CTTTGCTGTACATGGACTTGTGTTCGTGCTGATTGCAATTCGTCCTTTTTACTTTGATTTGTCTTCTATCGAGAAGCCGGGTTGTCGTTTAGTACCAAAAAATGATTCCTAAAGGATTGCTGGTGGTGACTGTGCTCTTTCTTGTGTTCTCCGTCGTGCTGATGGCGCACAGCGCTTATGGAGACGTGAGCTATTCTTTACCGGAGGAGATGAAACGCGGATCTGTGATTGGAAATATAGCGAAGGATCTCGGACTGGATGTGAACAGACTGTCATCTCGCAAGGCTCGCATTGATACTGAAGGTAATAGAAAACGATACTGTGACATTAATCTGAATACTGGAGAGCTGACCGTAGCGGAGAGAATCGACAGAGAGGGGCTTTGTGGGAAGAAATCGTCGTGCGTTTTGAATCAAGAGCTCGTGCTGGAAAATCCTTTAGAATTGCACCGGATCGGTCTTAGGGTTCAAGATATTAACGACAATAATCCATATTTTGGT[A/T]AAGACTTGATCAATTTGGAGATCAGTGAATCCGCCGTTAAGGGCAAACGCTTTTTACTTGAGGAAGCAAACGACGCTGATATTGGGCAGAATTCTATTCAAAGCTACTCTATTCAAAATAATGAATATTTTATTTTATCCATGCAAGCAAATTCCTTTGAAGAAAAATATGCTGAACTCGTTTTAAATAAGGAATTAGATCGCGAGAAGGAGAAAGAGGTGACTTTAATTCTGACTGCGGTAGACGGCGGGACTCCACCGAGATCAGGTACTGTAGCCATACACGTCACTGTGCTGGATGCTAATGATAATGCTCCAGTCTTTAGTCAGGCCGTCTATAAAGTCAGTCTGCCTGAAAATTCCCCTGTAGACACTGTAGTGGTGACAGTGAGCGCTACTGATGCTGACGAGGGACAAAATGGAGAAGTGACGTATGAGTTTGGGCATATTATGGAAGATTACAAGCATTTGTTTAATCTTGATCGAAAGACAGGTGTCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14087
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112958 | Nonsense | 190 | 802 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 14 (position 2920444)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 2113461 |
| GRCz11 | 14 | 2031812 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATGAATATTTTATTTTATCCATGCAAGYAAATTCMTTTGAAGAAAAATA[T/A]GCTGAACTMGTTTTAAATAAGGAATTAGATCGMGAGMAGSAGAAAGAGGT
Long Flanking Sequence:
AGCGCTTATGGAGACGTGAGCTATTCTTTACCGGAGGAGATGAAACGCGGATCTGTGATTGGAAATATAGCGAAGGATCTCGGACTGGATGTGAACAGACTGTCATCTCGCAAGGCTCGCATTGATACTGAAGGTAATAGAAAACGATACTGTGACATTAATCTGAATACTGGAGAGCTGACCGTAGCGGAGAGAATCGACAGAGAGGGGCTTTGTGGGAAGAAATCGTCGTGCGTTTTGAATCAAGAGCTCGTGCTGGAAAATCCTTTAGAATTGCACCGGATCGGTCTTAGGGTTCAAGATATTAACGACAATAATCCATATTTTGGTAAAGACTTGATCAATTTGGAGATCAGTGAATCCGCCGTTAAGGGCAAACGCTTTTTACTTGAGGAAGCAAACGACGCTGATATTGGGCAGAATTCTATTCAAAGCTACTCTATTCAAAATAATGAATATTTTATTTTATCCATGCAAGCAAATTCCTTTGAAGAAAAATA[T/A]GCTGAACTCGTTTTAAATAAGGAATTAGATCGCGAGAAGGAGAAAGAGGTGACTTTAATTCTGACTGCGGTAGACGGCGGGACTCCACCGAGATCAGGTACTGTAGCCATACACGTCACTGTGCTGGATGCTAATGATAATGCTCCAGTCTTTAGTCAGGCCGTCTATAAAGTCAGTCTGCCTGAAAATTCCCCTGTAGACACTGTAGTGGTGACAGTGAGCGCTACTGATGCTGACGAGGGACAAAATGGAGAAGTGACGTATGAGTTTGGGCATATTATGGAAGATTACAAGCATTTGTTTAATCTTGATCGAAAGACAGGTGTCATTAGCATAAAAGGCCCAGTAGATTTTGAGGAAGAAGCCACATTTAGTTTGCGAATTATAGCTAAAGATGGATCAGGTCTAACATCTTACTCAAATGTTTTAATCAGTGTGAGTGACGTTAATGATAATTCGCCTATAATAATAGTAAAATCTCTGAATATTCCAATTCCTGA
Associated Phenotype:
Not determined