Busch Lab

ZMP

si:dkey-126h10.1

Ensembl ID:
ENSDARG00000078070
ZFIN ID:
ZDB-GENE-070424-201
Description:
Novel protein similar to vertebrate solute carrier family 32 (GABA vesicular transporter), member 1
Human Orthologue:
SLC32A1
Human Description:
solute carrier family 32 (GABA vesicular transporter), member 1 [Source:HGNC Symbol;Acc:11018]
Mouse Orthologue:
Slc32a1
Mouse Description:
solute carrier family 32 (GABA vesicular transporter), member 1 Gene [Source:MGI Symbol;Acc:MGI:1194

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa8973 Nonsense Mutation detected in F1 DNA Not yet available
sa12972 Essential Splice Site Available for shipment Available now
sa23622 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa8973
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109269 Nonsense 60 400 2 4
ENSDART00000136645 Nonsense 60 397 2 3
Genomic Location (Zv9):
Chromosome 20 (position 1748328)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 1704193
GRCz11 20 1778539
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTGCAGCTACACTGGTAAGATCCTGGTGTCCTGCTTGTAYGAAGAGGAT[G/T]AGAGCGGCTGCCCGGTCCGCGTAAGACACACCTACGAGGACATCGCTAAT
Long Flanking Sequence:
CAGCAAACTTCAGCAAGTCATTCTCATTTGCTGAATTTGAAGTCACGTCTGAATCAGCCGTTTTCCTGAAGTAACTTCTGGGGCCTGACCGGGCCGTGTCTGAACTTTTGTGATGACTCCATGTTGCGATTTACCTGTGTAATTTTGACTTGTCTTTCTCTTTCCCACAAAACTGCACAGGTTGTGTGATGTTTGATTTGGGGGGCGTACTTAGGGAAGGGTTTTCATGCTGCACTTTGACCTTGACCTTGACCTTACAGTTCAATTGCACACATTGTCCTGGCTCACATTGGTCAGACAGTGTAAAAGTAGCTATTGTTGCCTTCTTACTTTGAGTACTTGACTAAGCACTGCTTTTGTCTCCTCAGGGTCTCTTTGTGCTGGGTCTGCCCTATGCCCTGCTGCAGAGCGGCTACCTGGGTCTGCTGTTGCTGGTGCTAGCCGCCCTCATCTGCAGCTACACTGGTAAGATCCTGGTGTCCTGCTTGTATGAAGAGGAT[G/T]AGAGCGGCTGCCCGGTCCGCGTAAGACACACCTACGAGGACATCGCTAATGCTTGCTGCAGACACATCTGCCCGTGCATCGGGGGAAAGGTTGTGAATGTGGCGCAGCTGGTTGAGCTAGTCATGACCTGCATCCTCTACTTGGTTGTGAGCGGTAATCTGATGTGCCACAGCCTGTTTTTCCTGCACCTGAGCCCGACGACCGGCTCCGCCATCAGCTTTCTGATCCTACTGCCCTGCATGCTGATCCGAGACCTGAGGGTGGTGTCCCGCCTCAGCCTCTTCTGCTCGCTGGCTCAGTTCCTCATCACCTTCATTGTGATTGGCTACTGTGTGCGCCAGTCTCCGCAGTGGGCCAGCAGAAGTCTGCGTGCAGATGTGGTGGACTTTGATGGCTTTCAGGTGGCGGTGGGGGTGATTATCTTCAGCTACACCTCACAGATCTACCTGCCCACGTTGGAAGAGAGCATGATGGACCGGCTGGACTTCAACACCATGATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12972
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109269 Essential Splice Site 254 400 2 4
ENSDART00000136645 Essential Splice Site 254 397 2 3
Genomic Location (Zv9):
Chromosome 20 (position 1747742)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 1703607
GRCz11 20 1777953
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCCTTCTCTGTGCTGGYCTTCCTAACKTGGGGAGAGGAAACTAAAGAGG[T/C]GCGCTGATCTCACATGMCTGTAGACATCGCTAAMGTCCTGATATACTTCA
Long Flanking Sequence:
AAAGGTTGTGAATGTGGCGCAGCTGGTTGAGCTAGTCATGACCTGCATCCTCTACTTGGTTGTGAGCGGTAATCTGATGTGCCACAGCCTGTTTTTCCTGCACCTGAGCCCGACGACCGGCTCCGCCATCAGCTTTCTGATCCTACTGCCCTGCATGCTGATCCGAGACCTGAGGGTGGTGTCCCGCCTCAGCCTCTTCTGCTCGCTGGCTCAGTTCCTCATCACCTTCATTGTGATTGGCTACTGTGTGCGCCAGTCTCCGCAGTGGGCCAGCAGAAGTCTGCGTGCAGATGTGGTGGACTTTGATGGCTTTCAGGTGGCGGTGGGGGTGATTATCTTCAGCTACACCTCACAGATCTACCTGCCCACGTTGGAAGAGAGCATGATGGACCGGCTGGACTTCAACACCATGATGGACTGGACTCACGCTCTGGCCTGTGTCCTGAAGACGGCCTTCTCTGTGCTGGCCTTCCTAACGTGGGGAGAGGAAACTAAAGAGG[T/C]GCGCTGATCTCACATGACTGTAGACATCGCTAACGTCCTGATATACTTCAAATTAAATTGAAGAATTAACTGAAACATTATAATGTATTATTTTGAAATCTGGCCAATCATTTCAAGTTTAAGTTTTGTGTTTTGTTTTTGTTTTTTGACACCTTTGAGCTACATTTGGCCTAACCCTAACCCTAATATGAGCCAACTGGTTTAATCATGAGCACGTACTCCTCTCGAAATTATTTTAATAAATTAAACTTCACTTCATGTAAAGCACTTTTAATTACCATTGTGTATGATGTGCTAAAAATAAACTTGCCTTGCCTTGCCTTTAAGTCAGGGGTGTCCAAAGTCGGTCCTGCAGATTTTACCTCCAACTTGCCTGAACACACCTTCAAGGATGTTTCTAGAAAGCCTATAAGAGCTTGATTAGCTAGCCTAGGTGTGTCTGGTTGGGGTTGGAACTAAACTTTGCAGGACACCGGCCCTCCAGGACCGAGTTTGGACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23622
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109269 Nonsense 388 400 3 4
ENSDART00000136645 Nonsense 388 397 3 3
Genomic Location (Zv9):
Chromosome 20 (position 1746807)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 1702672
GRCz11 20 1777018
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTACTGCTGGGCGGATTCTGCAGCGTCTCCGGGGTCATCTGCTCCATC[A/T]GAGGGATGATAACCGCCTTTGAGGACAAGTAGATAACACGTCGTCCTGTC
Long Flanking Sequence:
TGTGTCTGGTTGGGGTTGGAACTAAACTTTGCAGGACACCGGCCCTCCAGGACCGAGTTTGGACATGCCTGCTTTAAGTGGACTTTTATTATTATTTTCAGGTGATAACAGATAACCTGCCCTCTGCTCTGCGTACCGTGGTGAATCTGTGTCTGCTGGCGAAGGCTCTGCTCTCGTACCCGCTGCCATTCTATGCTGCGGCAGAAATACTGCAGACAGGCCTCCTGAAACTGGACTCCGGGTCTGAGCGGTGGACGCTGCTGCTGCTGCGTGGTTCTCTGCTGCTGCTCACCCTCCTCATGGCACTGTTCGTGCCCCGCTTTTCCCTCCTCATGGGCCTGACGGGCAGCGTGACAGGGGCGGCCATGACTCTGCTGCTGCCTGCTCTCTTCCACCTGCAGCTGAAGTGGACGCAGCTGGACCTGAGCCGGAGAATGCTGGACCTGCTGATCTTACTGCTGGGCGGATTCTGCAGCGTCTCCGGGGTCATCTGCTCCATC[A/T]GAGGGATGATAACCGCCTTTGAGGACAAGTAGATAACACGTCGTCCTGTCTGCCTCAAGGTTATTTTAGTAAACAACAACTCAGGCCTGTCCATATGAACACAGGTGTTTTCAAAGCAGCAGTTTTGCTGTTTGCCGACGGATCCACAATGCAGTTCGCCAACGGCGAAGTGAATGGGAAGCGTTAACACTTGACGCCCTGTGTGAATGAGGCATTAATGTAATGTAAGAGTTGATGTAAGTCTATGTAATGTGCAAAAACACTAAACCTCACTCTGGTCAACATTGGATGTGTACTTGTGAAAACTGAAACTAAATATATATAAAAACACAGAGAAACACAGCAAAAATGCTTTCCTTATTTCAATTTTTTGTCTTGGTTTTAGTACAAATATTCAAATCAAGAAGCATTTTCTAGATTAGCAAAAAAGTTTTTGTTTAAAGAAATAATATGCTAAAATAGTGTTTTATGTTAAAACTAGTAAAATAATTTGCCAACGT
Associated Phenotype:
Not determined