ZMP
si:ch211-191a16.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15562 | Nonsense | Available for shipment | Available now |
| sa28530 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa15562
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099821 | Nonsense | 2 | 868 | 1 | 9 |
| ENSDART00000146246 | Nonsense | 152 | 487 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 15 (position 40452558)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 41969265 |
| GRCz11 | 15 | 41926661 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATATATTTTCAACAGACAGGATTCCGAAACCCATAGACAAAAAATCCAA[A/T]GATTYAAATCAAACATAARAMAGAAACATCAGTACATTTTTGAAGGATTT
Long Flanking Sequence:
CCCCTACATTGACCAATGACAAGATGTCTTCTGCTGTTTGTTCATCTAAACTAATAATTTATGAAATCTGAGGGAAAAGAATAGACATAATAAATGACAGTGAAAGCTGCAAAGAAGTCCAAATCAATAGCACAGATTTACATTATGACTAGACAAAAAATTAATGCGGTTTTGGTGTAGCTAGTGTGCTGTGGGCTATTTTAGCAGGCTTAGGTTACTTTACCTGCTTGGTTGCAGAAAAGCAAAAGAATGAGTAAGACAAGATTATGTATGTAGAGTCACTGATGTTTTGATGCTGACTTCAAAATCTTATTTTGTCTGTAAGGTATTCACGAACAAAATATTATCAGGATATTCTGACGGCTGACAGCCTTCCTGGAAGATTCATCCATCAGTATGTTAACAGACCAATGTGATTTATGTATTTGTGAATATTGACTGTTATTGACGAATATATTTTCAACAGACAGGATTCCGAAACCCATAGACAAAAAATCCAA[A/T]GATTCAAATCAAACATAAAACAGAAACATCAGTACATTTTTGAAGGATTTGCAAAGCAGAGAAACCCAACACTCCTCAATGAGATTTACATAGATCTCTACATCACAGAGGGTGGGAATGGAGAGATCAGAAATGAACATGAATATAAAAGGATAGAAAAATCTCTGAAGACTGCAGCAACAGCAACAATACCTATAAAATGCAGAGACATCTTTACACCTTTACCTGGACAAGACAAAGCCATCAGAACTGTGCTGACGAAGGGAGTCGCTGGCATCGGAAAAACAGTCTCTGTGCAGAAGTTCATCCTGGACTGGGCTGAAGAGAAGGAGAATCAGGACGTCCAGCTCATCTTTCCACTTCCTTTCAGAGAGATCAATCTGATGAAGGACAAAACACTCAGTCTGTTAGATCTTCTTCAGCTCTTTTTCCCTCAAACTAAAGAAATGGAAATATCCAGTGACAAATATAGAGTGATGTTCATTCTTGATGGTTTGGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28530
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099821 | Nonsense | 180 | 868 | 1 | 9 |
| ENSDART00000146246 | Nonsense | 330 | 487 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 15 (position 40453092)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 41969799 |
| GRCz11 | 15 | 41927195 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTGATGGTTTGGATGAATGTCGGCTTCCCTTAAATTTCAGAAGGAAC[G/T]AGACTCTGAGGGATGCAAACAAAGAGACATCAGTGGATGTGCTGCTGACG
Long Flanking Sequence:
ACATTTTTGAAGGATTTGCAAAGCAGAGAAACCCAACACTCCTCAATGAGATTTACATAGATCTCTACATCACAGAGGGTGGGAATGGAGAGATCAGAAATGAACATGAATATAAAAGGATAGAAAAATCTCTGAAGACTGCAGCAACAGCAACAATACCTATAAAATGCAGAGACATCTTTACACCTTTACCTGGACAAGACAAAGCCATCAGAACTGTGCTGACGAAGGGAGTCGCTGGCATCGGAAAAACAGTCTCTGTGCAGAAGTTCATCCTGGACTGGGCTGAAGAGAAGGAGAATCAGGACGTCCAGCTCATCTTTCCACTTCCTTTCAGAGAGATCAATCTGATGAAGGACAAAACACTCAGTCTGTTAGATCTTCTTCAGCTCTTTTTCCCTCAAACTAAAGAAATGGAAATATCCAGTGACAAATATAGAGTGATGTTCATTCTTGATGGTTTGGATGAATGTCGGCTTCCCTTAAATTTCAGAAGGAAC[G/T]AGACTCTGAGGGATGCAAACAAAGAGACATCAGTGGATGTGCTGCTGACGAACCTGATTGTGGGGAATCTGCTTCCCTCTGCCCTCATCTGGATCACCTCCAGACCAGCAGCAGCAGATCTCGTCCCCTCTGAGTGTGTCCATCGAGTGACAGAGGTACGAGGCTTCAATGACCCTCAGAAGGAGGAATACTTCAGCAAGAGAATCAGTGATCAGAGTCTGGCCAATACAATCATCTCACACCTGAAGTCCTCCAGGAGCCTCTACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCACTGTTCTGGAGAAGATGTTGAGTGAAGCAGAGACTGCAGAGATTCCCAAGACTCTCACTCAGATGTACACACACTTCCTGATGGCCCAGATCAACATTAAAGACATGAAGTATACTGAAAAAAAAGACAAAGACATTATCTTCAAGCTGGGGAAACTGGCGTATGAGCAACTGGAAAGAGGCAATATAATCTTC
Associated Phenotype:
Not determined