ZMP
si:ch1073-210b3.2
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to H.sapiens LRRC16A, leucine rich repeat containing 16A (LRRC16A) [Source:Uni
Human Orthologue:
LRRC16A
Human Description:
leucine rich repeat containing 16A [Source:HGNC Symbol;Acc:21581]
Mouse Orthologue:
Lrrc16a
Mouse Description:
leucine rich repeat containing 16A Gene [Source:MGI Symbol;Acc:MGI:1915982]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36739 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36739
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111501 | Essential Splice Site | 12 | 61 | 2 | 3 |
| ENSDART00000136542 | None | None | 50 | None | 2 |
| ENSDART00000141918 | Essential Splice Site | 57 | 106 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 19 (position 139315)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 164472 |
| GRCz11 | 19 | 164562 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTGTATGTGTGTGTGTGTGTGTTTCACCGCTGTGTGTTTGTGTTTGAA[G/A]GACGTGGACACCATCTATCTGTCTCAGGACACCAAAGAGCTCTGCCTGCA
Long Flanking Sequence:
CAGACACTATGGGAAACTTACACTCCAGCAGAAGCAGGACCCTGCGGTACACACACACACACACACACACACACACACACACACACACACACTTGTGCATGCATAAAAACACATTCTGACACACACGCACACACATATACACACCCAGACATACACAAGACAGCACACAGACACACATAAATGCACTCCGACACGCAGACACACATGCGCAAAAGCAAACTCACACACAAATACACACACACACACACACACACACACACACACACATGTTTAAAGAAGTGCTGTTGTAACATAGAGTGTGTGTGTGTGCGCAGGTGGCTTCTCTCGTCTGTACTGGTGTGTGTGTGATCAGATGAACATGCCCTACAGAGAGGAGGTGCAGTGGGTCAGTAGCGCTCGTGTGTGTTCCTATCTGTCCTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTTTCACCGCTGTGTGTTTGTGTTTGAA[G/A]GACGTGGACACCATCTATCTGTCTCAGGACACCAAAGAGCTCTGCCTGCAGGACTTCATACACCTGGACAACAGGTCACACACACACAACATACACACACACAACATACACATGTACAGACAGACACATACAGACGCACACAAACCTGGATTATTATTGTATGTGATGTATTTGGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGGGATCTGCTGGCCATCACTGCTGCGCTCGAGTTCAACCAGTGGTTCATCAAACTCTCCATAAAGGACTTTAAACTGGTGAGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAGTGGTATCTGACATCAGATCAGTATTGTGTGTGTGTGTGTGTGTGTGTG
Associated Phenotype:
Not determined