Busch Lab

ZMP

ENSDARG00000077343

Ensembl ID:
ENSDARG00000077343
Human Orthologues:
PCDHB1, PCDHG@, PCDHGA1, PCDHGA10, PCDHGA11, PCDHGA12, PCDHGA3, PCDHGA5, PCDHGA6, PCDHGA7, PCDHGA8
Human Descriptions:
protocadherin beta 1 [Source:HGNC Symbol;Acc:8680]
protocadherin gamma cluster [Source:HGNC Symbol;Acc:8695]
protocadherin gamma subfamily A, 1 [Source:HGNC Symbol;Acc:8696]
protocadherin gamma subfamily A, 10 [Source:HGNC Symbol;Acc:8697]
protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:8698]
protocadherin gamma subfamily A, 12 [Source:HGNC Symbol;Acc:8699]
protocadherin gamma subfamily A, 3 [Source:HGNC Symbol;Acc:8701]
protocadherin gamma subfamily A, 5 [Source:HGNC Symbol;Acc:8703]
protocadherin gamma subfamily A, 6 [Source:HGNC Symbol;Acc:8704]
protocadherin gamma subfamily A, 7 [Source:HGNC Symbol;Acc:8705]
protocadherin gamma subfamily A, 8 [Source:HGNC Symbol;Acc:8706]
Mouse Orthologue:
Pcdhb1
Mouse Description:
protocadherin beta 1 Gene [Source:MGI Symbol;Acc:MGI:2136730]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa28241 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa28241
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103420 Nonsense 195 795 1 1
Genomic Location (Zv9):
Chromosome 14 (position 2827488)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 2183063
GRCz11 14 2101414
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGTGGTAAATATGGCGAGCTTGTTTTAAACAAGGAATTGGACCGTGAG[C/T]AGCAGAAAGAGGTGACTTTAATTCTAACTGCGGTAGACGGCGGGACTCCA
Long Flanking Sequence:
AGATGAAACGCGGATCTGTGATTGGGAATTTGGCGAAGGATCTTGGTATCGATGTGAAAAGGCTGTCATCTCGAAAAGCTCGTATTGATGCAGAAGGCAACAGAAAACGATACTGTGACATTAATCTGAACACTGGAGAGCTGACCGTAGCGGAGAGAATCGACAGGGAAGGGCTTTGTGGAAAAAAATCGTCATGCGTTCTTAAACAGGAGCTCGTGCTGGAAAATCCTCTAGAGCTGCATCGCTTTATTTTTAATATCGAAGATATAAATGATAATTCACCGCAATTTAAAGAAAGTGTTATTAAATTTGAAGTACAGGAGTCAGCAGACAAAGGATCTCGTTATTTATTAGATGAGGCTCATGATGCGGATATTGGTATGAATTCAGTGCAGTCATATACACTTCAGAATAATGACCATTTTGTTCTCAATATTCACAATGGCGACAGTGGTGGTAAATATGGCGAGCTTGTTTTAAACAAGGAATTGGACCGTGAG[C/T]AGCAGAAAGAGGTGACTTTAATTCTAACTGCGGTAGACGGCGGGACTCCACCGAGATCAGGTACTGTAGCCATACACGTCACTGTGCTGGATGCTAATGATAATGCTCCAGTCTTTAGTCAGACCGTCTATAAAGTCAGTCTGCCTGAAAATTCCCCTGTAGATACTGTAGTGGTGACAGTGAGCGCTACTGATGCAGACGAGGGGCAAAATGGAGAGGTGACGTATGCATTTGGTCATTTATCAGAAATCTATCAGGAAATGTTTTTCATTGATGCAGTGTCTGGTGAAATTAAACTAAAACGCTTGTTTGATTATGAAGAGGAGACCTCTATTCAGCTGCCAATTCAAGCTAAAGATGGTCAAGGGTTAGCAAATAGATGCACTGTATTGATAAATGTTATTGACGTAAATGATAACGCACCTGTAATAGTGATAAATTCTCTGAATGTTCCCATTCCTGAGAGCGCGTTACCCGGTACAGAGGTTGGCATCATTAAT
Associated Phenotype:
Not determined