Busch Lab

ZMP

LOC100334297

Ensembl ID:
ENSDARG00000077190
Human Orthologue:
HCN1
Human Description:
hyperpolarization activated cyclic nucleotide-gated potassium channel 1 [Source:HGNC Symbol;Acc:4845
Mouse Orthologue:
Hcn1
Mouse Description:
hyperpolarization-activated, cyclic nucleotide-gated K+ 1 Gene [Source:MGI Symbol;Acc:MGI:1096392]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa8952 Nonsense Mutation detected in F1 DNA Not yet available
sa9828 Nonsense Available for shipment Available now
sa2904 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa8952
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113932 Nonsense 122 593 2 8
Genomic Location (Zv9):
Chromosome 17 (position 1943304)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 10330300
GRCz11 21 10422781
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTGATTGAWCTRAAYTGAWMATGTTTTGTCTCCCCCTGCAGGTTCTACT[G/A]GGACTTGATAATGCTCATCATGATGATGGGGAATCTAATTATCATTCCTG
Long Flanking Sequence:
TTCCTTGGCAGTTCGTGGGTCCTTTAGGCTTTTCCCCTTCACAAAGAAACTTTCCAAAGACATCTGTTTCTTACTCATTTTGCTGCTTGTTGGTTAAATTTGGGCGCTCAAGTGATCGAAATGTAAGCAAGAGAATATGGTCATTTTTCAAAATGAAAGATTTTTCAAAATAAAAGATCATTCAGATTTAAATAATAAACATGACAGAAAAAATTTATGATTTCTTGTGCGGCCCGGTAGCAATTGATCCACGAACCGGTACCAGTCCATGGCCTGGTGGTTAAAGACCATTGGATTACGGTCTCAAACTGTTGTTTTGGTAAATATTGCTTTATTTTTGCTAGTTGTTGCCACCTACTGACCTGGCATGCATTTTTACAGCAACCTTGAATGCTATTTTCAATTTGAACCTATGAACTGAATTCAACGAGAAATTTGTTTTCATCAATCTTTGATTGAACTGAATTGAAAATGTTTTGTCTCCCCCTGCAGGTTCTACT[G/A]GGACTTGATAATGCTCATCATGATGATGGGGAATCTAATTATCATTCCTGTGGGAATTACCTTCTTTTCCGAGCAAACCACCACCAGCTGGCTCGTCTTCAACGTGGCGTCGGACACCATCTTCCTGGTGGACCTGGTCATGAACTTCCGAACGGGAATTGTCAATGAGGAAAGCTCGGAGATCATCCTGGACCCAAAGGTCATTAAGATGAACTACCTGAAAAGTTGGTTCGTGGTAGACTTCCTGTCCTCCATCCCGGTGGATTATATCTTTCTAATAGTGGAGAAAGGCTTCGACTCAGAGGTCTACAAGACGGCCCGAGCGCTGCGCATCGTACGCTTCACCAAAATCCTCAGCTTGCTCCGTCTTCTCAGGCTTTCACGCCTCATCAGATACATCCACCAGTGGGAGGAGGTGAGGGGACAGCGTGTGTATATGTGTGTGTGTGTGTGTGTGTGAGTGAACAAACTCTGACGCAGATGGCCTTTAGTAACACGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9828
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113932 Nonsense 322 593 4 8
Genomic Location (Zv9):
Chromosome 17 (position 1839958)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 10226954
GRCz11 21 10319435
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGATCTTTTCTTATCTTCTCTCTTAGAACGACTCGTGGGGGAAGCAGTA[C/A]TCWTACGCCCTGTTCAAGGCCATGAGCCACATGTTGTGTATCGGGTATGG
Long Flanking Sequence:
TACACTATTACAATTTAGGTGCTAGTAGGAATTACATGACGAATTAAAATCTGTCTGAACTTTTCAGGATTCACAAAAAATTCCGGCAACATTGACAACAGCTCTGGCAGAAATGTAGATCAAACCAAGACAGAAACTCAGTATTTTTCATATATTCTTCCATTTTCTCTAACTCGTTCTTTCATATGTCAAACAAATAGACCCTCAAAAATTCAACTAGAAGCTGTATTTTCTGGTTGTATTTTAATAAAGAAAAAGCAAAGTAATATATCATGTCATTACCCTCAGTAAAACAGCAAATGCAACTGGGGGTCTAAGACTTTTGCACAGTACTGTAAATGTATGAAGACAGACAGTTCTGTCATGCATGAATGTGAAGCTTCCAGTCTTCTTTCAAGAAATGTATATTATGTGTCATTTTCCAAATTATTTCCTATGTATTTTCAATGGCTGATCTTTTCTTATCTTCTCTCTTAGAACGACTCGTGGGGGAAGCAGTA[C/A]TCATACGCCCTGTTCAAGGCCATGAGCCACATGTTGTGTATCGGGTATGGAGCCCGAGCGCCTGTTAGCATGTCCGACCTCTGGATCACCATGCTCAGTATGATCGTTGGCGCCACCTGCTATGCCATGTTCGTGGGTCACGCCACAGCCCTCATCCAGTCTCTGGACTCGTCCCGACGACAGTACCAGGAGAAGGTAAGCGCAGGGTTTATTATGTAAAGATTTGCTTATTTCCAATAATAATAATATATAGTTTTTTTTCATCATAATCATCTTTATTATTGTTGTTGTTATATGTAATAATAATAATAATAATAATAATATTAATAATAATAACAGTGACGCAGTGGCGCAGTAGGTAGTGCTGTTGCCTCACAGCAAGAAGGTCGCTGATTCAAGCCTCTCTTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGCTCTCCCCGCGCACGTGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2904
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113932 Nonsense 382 593 4 8
Genomic Location (Zv9):
Chromosome 17 (position 1839780)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 10226776
GRCz11 21 10319257
KASP Assay ID:
554-2771.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTYGTGGGTCACGYCACAGCCCTCATCCAGTCTCTGGACTCGTCCCGA[C/T]GACAGTACCARGAGAAGGTARGCGCAGGGTTTATTATGTRAAGATYTGCT
Long Flanking Sequence:
CTTTCATATGTCAAACAAATAGACCCTCAAAAATTCAACTAGAAGCTGTATTTTCTGGTTGTATTTTAATAAAGAAAAAGCAAAGTAATATATCATGTCATTACCCTCAGTAAAACAGCAAATGCAACTGGGGGTCTAAGACTTTTGCACAGTACTGTAAATGTATGAAGACAGACAGTTCTGTCATGCATGAATGTGAAGCTTCCAGTCTTCTTTCAAGAAATGTATATTATGTGTCATTTTCCAAATTATTTCCTATGTATTTTCAATGGCTGATCTTTTCTTATCTTCTCTCTTAGAACGACTCGTGGGGGAAGCAGTACTCATACGCCCTGTTCAAGGCCATGAGCCACATGTTGTGTATCGGGTATGGAGCCCGAGCGCCTGTTAGCATGTCCGACCTCTGGATCACCATGCTCAGTATGATCGTTGGCGCCACCTGCTATGCCATGTTCGTGGGTCACGCCACAGCCCTCATCCAGTCTCTGGACTCGTCCCGA[C/T]GACAGTACCAGGAGAAGGTAAGCGCAGGGTTTATTATGTAAAGATTTGCTTATTTCCAATAATAATAATATATAGTTTTTTTTCATCATAATCATCTTTATTATTGTTGTTGTTATATGTAATAATAATAATAATAATAATAATATTAATAATAATAACAGTGACGCAGTGGCGCAGTAGGTAGTGCTGTTGCCTCACAGCAAGAAGGTCGCTGATTCAAGCCTCTCTTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGCTCTCCCCGCGCACGTGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAGGTGATATGGGTAGGCTTAATTGCTCGTAGTGTATGAGTGTGGATAAGTATGGATAAACTATTATTATGATTTTTTTATTATTATTAATAATATTATTATTATTATTATAAGTATTATTATTAGTAGTATTATCAGTTTTTTACTTCTATGTTAAGCTGCTTTGAC
Associated Phenotype:
Not determined