ZMP

col6a3

Ensembl ID:

ENSDARG00000077139

ZFIN ID:

ZDB-GENE-070501-8

Description:

Novel protein similar to vertebrate collagen, type VI, alpha 3 (COL6A3) [Source:UniProtKB/TrEMBL;Acc

Human Orthologue:

COL6A3

Human Description:

collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213]

Mouse Orthologue:

Col6a3

Mouse Description:

collagen, type VI, alpha 3 Gene [Source:MGI Symbol;Acc:MGI:88461]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa31713	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa31713

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113176	Nonsense	2597	3107	37	45
ENSDART00000135769	None	None	305	None	9
ENSDART00000138754	Nonsense	1460	2027	31	42
ENSDART00000140346	None	None	429	None	4
ENSDART00000142446	None	None	28	None	2
ENSDART00000145734	None	None	320	None	10

The following transcripts of ENSDARG00000077139 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 9 (position 24956924)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	24112710
GRCz11	9	23923579

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTATATTCCTCCTCGTGGAGTCCGAGACCGAAGAGATCCCACCACTGACT[T/G]AGACATCGACATGGCTTTCATACTTGATAGTTCGGAGAGCACCTGGCCCT

Long Flanking Sequence:

CTACCAAACAAATTTAAAGTGTTTGAACTTGTTTGAAAATGTCATCCACCTGGAAAGGTAAACTGTAATGAACTCTACACAAACTCTACCTGACAGGTTTAATTATTGTTTAGTGAGGTAAATTAAGTAAAACATTTGGCACATTGTTCTGATTTAAGTGTAAAAGAAAGCATACACTAAGTATATTACATTTACTCTGTTTCAGCTTAACAACACTGCATTAGCCCAGATTATTGTCCTGCCCTCACCTGGCAGTGCTGAATACAACAATGTCATCAAGAAGATCATGACCTGCCATATCTGCTTGGGTAAAACACAAAATGAAAAGCCATCAAACTTATTTGTCTAAAACTATGACTCAAACTTTTGAAAACAGCAAAACAGAATGTAACATTTCTTTGGTCATTTATTTCTTTTTTCAGACTTCTGTGCCCCTGATCAGATCTGTGATTATATTCCTCCTCGTGGAGTCCGAGACCGAAGAGATCCCACCACTGACT[T/G]AGACATCGACATGGCTTTCATACTTGATAGTTCGGAGAGCACCTGGCCCTCAGTCTTCACAGAGATCAAGCAATATGTGGCTCTGATGACAGAACAGCTAGTTATGTCCCCTGAGCCAACCAGCACTAGCCACCATGCTCGAGTGGCGCTTGTTCAGCATGCACCTTATGAATACTTGCACAACAGCAGTGGCATTCCCATCAGCGTGGCCTTTGGTTTGACGGATCACAAGTCACCTCACAGTGTCCGCAGCTTCTTAGAGGATAAGGTGCACCAGCTGGAAGGAGGACGGGCACTTGCATCTGCACTTGAGGGCACTGTTGAACATGTGTTTGAGAAGGCACCACATCCTCGCCACTTGAAGGTTTTAGTTCTGTTAGTGACTGGACCAGTTGAATTGTATGAAGACAGGATAGTAAGGGCTGCCACTGAAGTTAAATGCAAAGGCTACTTCATAGTGGTGATGGCGGTTGGAAAGCTGTTCAGTACAGGTGATGTCC

Associated Phenotype:

Not determined