Busch Lab

ZMP

arid5a

Ensembl ID:
ENSDARG00000077120
ZFIN ID:
ZDB-GENE-100525-3
Description:
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:B0BLY1]
Human Orthologue:
ARID5A
Human Description:
AT rich interactive domain 5A (MRF1-like) [Source:HGNC Symbol;Acc:17361]
Mouse Orthologue:
Arid5a
Mouse Description:
AT rich interactive domain 5A (MRF1-like) Gene [Source:MGI Symbol;Acc:MGI:2443039]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa8986 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

This allele has been removed from public view.

Allele Name:
sa27291
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115398 Essential Splice Site 117 600 4 7
Genomic Location (Zv9):
Chromosome 8 (position 54674371)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 52409143
GRCz11 8 52395672
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGTGGAAAATCTACAAAGCTGTAGAGACACTTGGAGGATATGATGCGG[T/C]AAGGATCCTCACGCAAAACAAACCTCCAGACAGAGCTTTCACAACTGCCG
Long Flanking Sequence:
TTGACTAAAAACAACCAAATATCAACGTCATATAGACGTCCTTAGACGTCAAAATAACATTGTCCCTAGACGCTGGATAGACATTGAATTTTGGTCACCTGACATCATGATCTAAACTAACCTAATATTAACATATTATAATGTGTGCCTGCTGGGTAGTATTCAGCTTGAAATACAATTTAAAGGCTTAACCAGGTAAATATGTTCAGTAATTTGGCACCAAACAAACACTTTATTTAGGCTAAATTTAAAACCATTATCTGCTTTGTTTTTATTTCTACTACATTTTCTAATACTGAAGTGTTCCAATATATGGTAACGTGATCTTTAAACTTATTAGACGATAAAGCAGGACATATTTAATTTAAAAGGTGCAACATTTTCAGTGGCATCCACTTATCTACACTGTGTGTTAACATAAACACGTCTCTCTCTCTTTCTTCCAGTCAACCTGTGGAAAATCTACAAAGCTGTAGAGACACTTGGAGGATATGATGCGG[T/C]AAGGATCCTCACGCAAAACAAACCTCCAGACAGAGCTTTCACAACTGCCGCTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTCCCGCATCTCACGCTGATGCTGCTGATAGCATTATCTTTCTTGATTTATTGTGCAAGTATGCCAACTACCCGAGGAAGTTGAGAAGCAGGTCATGCATTTGCCTCTTGCTCTTGCAGAGTGGAAACAATAGTGGCTTCAGGTCACACTATACTTACAGCAGTGACCGTTACGACCACAATGAGAATGAGGGTCCATCCGTTTTCTGCCCAAACCTGCTGCTTCAAAAGCTTTGTTCTCTCACCCTTAAGTTTCCACTCCCCCTGAGGTGCTGAAGAGTTTGTGTTTTTAATGAGCGTTCGTGTGGTCAGTCTGCATTTAATTTTAGACATGGTCAAAGCTGTGTTTTGTTTGCGAATTAGGTCTACAAGTGGAAAGTGAGACTACAAAGATAGCCATTATTGCATCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8986
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115398 Nonsense 331 600 7 7
Genomic Location (Zv9):
Chromosome 8 (position 54680884)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 52415656
GRCz11 8 52402185
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCCWTCTGGATCCCTGTCTCGAAGCYCCTCTCCATACTCCGTCTCCTCC[G/T]AGGACTGCATAGCCRTCAYGACTCAAAAGTCTCCAGCTAAAGAGCCTGAA
Long Flanking Sequence:
AGCTAAACTATGCAGGACACTGGCCCTCCAGGATCAAGTTCGCCCACACCTGCCCTAAACACTACCGTTCTTACACTACTGTAAGTTCTAAAGTATCCCACTTTTCTTTTCAGGAGAAAATGTTGTCTGATCACCACTGTGACAGAGGCAGGTGTTCTCATCACAGTCCATGGCTGATATCCTCTGATCGCCTTGACTCCGAGCACACATCCACAGCTCCAGTCCTTGGCATGAGCTCCAGGGAGAACCCGCTTCTCCAGACTTCCAGCCCGCCCGAAGTCATCTCCCCCCTGGAGAAGAAGAAGCGTCTGGCTCAGGCTAGCCTCACTATCCCTGCCTCAGAGGACGGTGGAGAACTTGAGCGACCCTCCGTTATCCACATATCCCACTCTTCCCAGTCTAACACTCGCGGTCGCCACTCCTCCGATGGCTCTCCTGTCCCAGTCTCCTCTCCTTCTGGATCCCTGTCTCGAAGCCCCTCTCCATACTCCGTCTCCTCC[G/T]AGGACTGCATAGCCGTCACGACTCAAAAGTCTCCAGCTAAAGAGCCTGAAAACAAAACAGCGACTCGTTTGCCAGCTCTGTCCACATCCAAAGCTGTCAGCACCGGAGTTTGCAAACCACTCAGCTGTTACCCCAACACCAAAGAACTCGCCAACTATCCCCGCTTACATTATCGAGAGTTCCTGCAAGCTGGTGCAACAGAAAAGACCCAGAGGAGTCTTTTAGCATGGACCTCTGATGATAAATCCAGACTTGCATCCCATAGGCTGCCCTTGCCAGCCTACACCAAACCCTACTGGGTCCCTCATGCCTCCAGCTTCTCCAAGGTCTTGCCCCGGGATCCCTGCAGGCCCATGTCATCACTACAGCCCTCTTTTAAACCGCACATGTCCTCCTACCACCAGCACCTCCTAAAGAGACCTGATGAAGCCTACTTGAAGAAGATGCCAGTATCTTCTCCGATTCGCATTACGGACAGGAAGGAGAAGGCAAAGACGGCG
Associated Phenotype:
Not determined