Busch Lab

ZMP

LOC559514

Ensembl ID:
ENSDARG00000077052
Human Orthologue:
TNRC18
Human Description:
trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:11962]
Mouse Orthologue:
Tnrc18
Mouse Description:
trinucleotide repeat containing 18 Gene [Source:MGI Symbol;Acc:MGI:3648294]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa15126 Nonsense Available for shipment Available now
sa20097 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa15126
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103486 Nonsense 477 2925 4 29
Genomic Location (Zv9):
Chromosome 3 (position 40438593)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 40301953
GRCz11 3 40443811
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAAAAGAGACATTTTACGAGAGGAAGGCTCGATAATTAGGTCAAATGGTT[T/A]GGCCATGAAAAAGCCTTTGCATTTGGAAATGTGCACAAATAAATCTGGAA
Long Flanking Sequence:
CGATGAAACCATCCGACCAGGGGGCCACCTTTCTAACGACAAACAGAAAAGATGCGATTCAGTTGCTACATCAGCTGGCACTCTGCATGTTTCGTATGCCAGTCCCTCTTCCCTGCAGCCCAGCCCATCCCATCTCCCGCCCAGGCTGGTGTCCTCTGGCACCTACCCTCCCCCTCACCACATGCCGCCCAGCATGTACCCACTCTACTCTACAACGAAAGAGCCAGGCAAAGAACACAGAGTGATAGCTCCTACTTATGTGCCTTCTGTCGAGGTTTACGATGAGCGAAAAGGGCCAATTCAAATTGCCTCCCAAGCTCGAGATAATAAAAATGACAAGAGCAGGGAGAGGGAATCGCACAGATCAGCCCTGCAGTTGGGAAATGAGAGAACACTTATGGACCATGGTCGATCCTCCGTTAGGAGCGAGTCGCCGCCTCACGGGGATGTCAAAAGAGACATTTTACGAGAGGAAGGCTCGATAATTAGGTCAAATGGTT[T/A]GGCCATGAAAAAGCCTTTGCATTTGGAAATGTGCACAAATAAATCTGGAAATAGCCCAGATGCCAGGGACTTGACTAACACTACATCAAAACACATGATCAGAACAGGACTCGAGACTGAATCCCGCAGCCAAGAGCGGGATAGGGTTCAAAGATCTACCCATTCCTTCTCTGGAATGGATCCAAGTTCGCTTCACACTGAGCAGCATCCGTTGAAGACCTTGGGTTCTGCTGAGCCCAAATGGAAGCCTTTCGAGATGGGCAATTATGCTACCAGTCACATGGCTGCATTGGCAGCCCAACACAACCACGGAGCCCGAGGTGAGGAAGAGGGCAAGCAAATGTACCTAGACACTACTAGCTTGCACAGACCAGTAGGCAGCAGTGGAAGTCCTGATGGACATGGGGAGGTTTCAGCTATGCAGAGCCTCATCAAATATAGTGGCAACTTCTCCAGTGAGTCTGGCTCTAGGCACGGATCCGATAGTCGTAGTCCATTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20097
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103486 Nonsense 1980 2925 18 29
Genomic Location (Zv9):
Chromosome 3 (position 40462467)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 40325827
GRCz11 3 40467685
KASP Assay ID:
2259-3923.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCCCGGGAGTTCAGTTTTGACCTTACAGCGGATGGGAGTGAAGACGAA[C/T]AGTGGACACGGCGGAGGAGCGAACGCATCTTCCTCCATGATGCTGCTCAG
Long Flanking Sequence:
TGTTTAGATGAAAAAAATATTGACTTTACTAAAATAGCCATGTGTACAGTTATGCCTGAGGTATTTCGTAAACATTTTACTATTTTCTTTTTATTTGCAAGAGATCTAATTGATTTAACCATGCTCGAGACAGTTACACCATAGGACAGTTTTGTAAAAGAATGGAATAACAGTTTTTAAGTTAAGAGGTCCATTGGAGACAAAGAAATGTCACATGAAAGCGTATTGCGTGTTTGCTTTAAGTAATAATTAAATGTTATATCTTCTGGATTGTAGGTACGGAGTTTGAGTTTACCGATTCGGAGAGTGATGTCAAGACAAGAAAGAAGTTTCCGTCGCTGTTGCATGGCAAGAGATCCGCTCCCGAGCTTCCTCTCTTGCCTCCCGCGAGCGTGATGCGTGACGACTCCAGCCCCACCAAGCGTGGACGCAAACCCAAGAAACCCAAGTCTCCCCGGGAGTTCAGTTTTGACCTTACAGCGGATGGGAGTGAAGACGAA[C/T]AGTGGACACGGCGGAGGAGCGAACGCATCTTCCTCCATGATGCTGCTCAGTCCACCCCCATCTCCCCGTCCAGCAAAACTCCTCTTCCGCTCACTCCCAAACCTGCTCGCGGCCCCAAAACCTCCCCGCAGAGCCCCAAGGAACTGGTCAAAGCCAAGGAGGTGAAAGATCCCAGCAAGGTAAGCCATTGTTTTATTGATATATCTCAAATCTTGCTTGCCAGCCACAACCAAACGGTATGGGCGCTTGATACCACCAGCAGGTGTCCTGCTACATTTGTCGGACAAGGAAGCCTCCCGCTGTGAGTGTCATGTTGTTGGACACAAAAGGATGACTGCAGCTTGCCAGGCTACAATTACTAACCATCACCATTCCTCCCTCCGAGTCCTCCCGTGTTTTTCCTTTCTCTTAAGTGTTCAGTACACGGCTGCCTATTAATGTTTACTTGTCTATCCAGTGTTGTTGAATGGCTGTAATGTCTGGGAGAACTGAGCCCGATT
Associated Phenotype:
Not determined