ZMP
si:ch211-206k20.6
Ensembl ID:
ZFIN ID:
Description:
BEN domain-containing protein 3 [Source:RefSeq peptide;Acc:NP_001139063]
Human Orthologue:
BEND3
Human Description:
BEN domain containing 3 [Source:HGNC Symbol;Acc:23040]
Mouse Orthologue:
Bend3
Mouse Description:
BEN domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:2677212]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44792 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6315 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44792
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112292 | Nonsense | 627 | 816 | 3 | 3 |
| ENSDART00000132820 | Nonsense | 627 | 816 | 4 | 4 |
| ENSDART00000138571 | None | None | 89 | None | 3 |
Genomic Location (Zv9):
Chromosome 13 (position 32867273)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 32513221 |
| GRCz11 | 13 | 32643671 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTTGTCGGCAAACTTGATGAACGATGTAGACGACGAGATACCGACCAA[C/T]GACGTTCATATCAACAACAGCGGAAAGCCTGTTCACCTGATCAAGAGCCT
Long Flanking Sequence:
TGGAGGAAGCACTGGAGAACGCTTCAACCAGTGGGAACGGAGAGATGTACAACACTACCCGTCTACCTGACAACATCTCTATTGTTAAAATCAGTGACCTGTGTGATTACGAGAAACCAAATCGCAGGTCTAAGAAATCATGGCTAGAGCCTATGGATTTTGACAAACTAGAGATTCCTCTTCCGAACTTTGATGTTCCTCAGGAGTATTTACTTACTAAGGAACAGCTAAAGAATAACTACGAATGCAGTCTGTCAATTGGGAACTTTGCATCTCGTCTCCTGGTTCTCATGTTCCCTGAGCTCTTCACTAACGAGAACGCACGTAAATATTACAACTGCAGCGGATCTCTAGGCAAGAAACAGCTAGATCCTTTACGAATAAGTCTCATCCGACATTATGTACAACTGCTCTACCCACAAGCTAAGAACGACCGCGTATGGACCCTTGAGTTTGTCGGCAAACTTGATGAACGATGTAGACGACGAGATACCGACCAA[C/T]GACGTTCATATCAACAACAGCGGAAAGCCTGTTCACCTGATCAAGAGCCTGACCCGAATGACTCCCTGTTATCTGCTGGCCAAATCAATGCTCTTACTTCTGATCGCTTGAAAGAGGACTTTGAAGTCCTGTCTTCACCCCTGGAGAAAAGCAGCAAAGATTTCTGCAAGATTCCTCTCGAGGACCTCTCGGTACCCACCCCAGACTTCCCAGTGCCTTCTGAATACCTGCTTACGGATGCTGAAGTGAGGGAGATTGTCCAACAGAGTCTGTCTGTGGGAAATTTTGCTGCTCGCCTTCTCGTCCGCCTCTTCCCCGAGCTTTTCACACAGGAAAATTTGCGGCTGCAGTATAACCACTCTGGGGCCTGCAACAAGAAGCAGCTGGACCCCATGCGCCTTCGACTTATTCGTCATTACGTGGAAGCCGTCTATCCTGTTGACAAGATGGAGGAGGTGTGGCACTATGAATGTGTGCCAAGCATCGACGAGCGCTGTAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6315
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112292 | Nonsense | 635 | 816 | 3 | 3 |
| ENSDART00000132820 | Nonsense | 635 | 816 | 4 | 4 |
| ENSDART00000138571 | None | None | 89 | None | 3 |
Genomic Location (Zv9):
Chromosome 13 (position 32867249)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 32513197 |
| GRCz11 | 13 | 32643647 |
KASP Assay ID:
554-5003.1 (used for ordering genotyping assays)
KASP Sequence:
GMTGTAGACGACGAGATACYGACCAACGACGTTCATATCAACAACAGCGG[A/T]AAGCCTGTTCACCTGATCAAGAGCCTGACCCGAATGACTCCCTGTTATCT
Long Flanking Sequence:
CAACCAGTGGGAACGGAGAGATGTACAACACTACCCGTCTACCTGACAACATCTCTATTGTTAAAATCAGTGACCTGTGTGATTACGAGAAACCAAATCGCAGGTCTAAGAAATCATGGCTAGAGCCTATGGATTTTGACAAACTAGAGATTCCTCTTCCGAACTTTGATGTTCCTCAGGAGTATTTACTTACTAAGGAACAGCTAAAGAATAACTACGAATGCAGTCTGTCAATTGGGAACTTTGCATCTCGTCTCCTGGTTCTCATGTTCCCTGAGCTCTTCACTAACGAGAACGCACGTAAATATTACAACTGCAGCGGATCTCTAGGCAAGAAACAGCTAGATCCTTTACGAATAAGTCTCATCCGACATTATGTACAACTGCTCTACCCACAAGCTAAGAACGACCGCGTATGGACCCTTGAGTTTGTCGGCAAACTTGATGAACGATGTAGACGACGAGATACCGACCAACGACGTTCATATCAACAACAGCGG[A/T]AAGCCTGTTCACCTGATCAAGAGCCTGACCCGAATGACTCCCTGTTATCTGCTGGCCAAATCAATGCTCTTACTTCTGATCGCTTGAAAGAGGACTTTGAAGTCCTGTCTTCACCCCTGGAGAAAAGCAGCAAAGATTTCTGCAAGATTCCTCTCGAGGACCTCTCGGTACCCACCCCAGACTTCCCAGTGCCTTCTGAATACCTGCTTACGGATGCTGAAGTGAGGGAGATTGTCCAACAGAGTCTGTCTGTGGGAAATTTTGCTGCTCGCCTTCTCGTCCGCCTCTTCCCCGAGCTTTTCACACAGGAAAATTTGCGGCTGCAGTATAACCACTCTGGGGCCTGCAACAAGAAGCAGCTGGACCCCATGCGCCTTCGACTTATTCGTCATTACGTGGAAGCCGTCTATCCTGTTGACAAGATGGAGGAGGTGTGGCACTATGAATGTGTGCCAAGCATCGACGAGCGCTGTAGACGGCCCAATCGCAAGAAATGTGAC
Associated Phenotype:
Not determined