ZMP
ralgapa1
Ensembl ID:
ZFIN IDs:
Description:
ral GTPase-activating protein subunit alpha-1 [Source:RefSeq peptide;Acc:NP_001139776]
Human Orthologue:
RALGAPA1
Human Description:
Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:HGNC Symbol;Acc:17770]
Mouse Orthologue:
Ralgapa1
Mouse Description:
Ral GTPase activating protein, alpha subunit 1 Gene [Source:MGI Symbol;Acc:MGI:1931050]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15658 | Nonsense | Available for shipment | Available now |
sa42883 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa14320 | Essential Splice Site | Available for shipment | Available now |
sa9808 | Essential Splice Site | Available for shipment | Available now |
sa23016 | Nonsense | Available for shipment | Available now |
sa42884 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa15393 | Nonsense | Available for shipment | Available now |
sa11505 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15658
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Nonsense | 71 | 2105 | 2 | 40 |
ENSDART00000124584 | Nonsense | 71 | 2066 | 2 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12649174)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12631696 |
GRCz11 | 17 | 12785762 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTACTATGTCTTCTTTGAAAACTTYGTCACCATCGAGGTTAACCTGAAA[C/T]AGAAAGGTAAGACCTGGAGCACTTCATWTTCTTTGTTGTTTAAAGATAWA
Long Flanking Sequence:
GTTCAGCACTTTCTCTGTGTGTCATTTCGTTGTTCTTAAACATAACTCATTTTTCAGATTGTTTTGTTTTTTATTTTTATGTTTGTATTGTTTGTTTGGGCTCTTATCAAAATCTGGTTCAATTCCATGTCAACAGTTCTTTTTAAAAATGTTATTCCCACAAAAAACATGACGTATTCAATACTTATTTTCCCCGCTGTAGTTTGACTGTTGGTGGATGATTAAACTCTGATGTGAGTAAAACCTTTTAAAGTGAGTAAAAAAAAAAAGATAAATTCGCAGACATTACAAGACCAACATCTTAAATAAATGCATTTTAATTATGTGCTTTAGTACAGCATTCAAATAATTTGAGTTTTTAAATAGCATGTTAACACGTTTCTTTTGTTTGTGTAGAAAATGCGGAGTCTGCTGAACTCAAGCACCTCTTTGAGCAGAATTACTCCCACATCTACTATGTCTTCTTTGAAAACTTTGTCACCATCGAGGTTAACCTGAAA[C/T]AGAAAGGTAAGACCTGGAGCACTTCATTTTCTTTGTTGTTTAAAGATATAATTCTTTGCGCTCTTGTTTGTTATTTGAATGTTTTGCAAAGTTGCATTGCTTTGCAGTTGACCTACTCCTGGTTGTCCTCTTTGCAAACACAGAGTCAGGAGTCACAGAGTTAATGAGGAAGTTTCCATGAAATGGCGTTTGAGGAAAATTAGCTTGCCTCTGGTTAGCCATGTCTGGTCACACAAGCTCGTTATAGTGCACAGAGATCGCGGCTAGTGTCTCGCAACACTGCACAGTCGCTCATTGAGTATTCAGAGAACTGCTCGCTGCCTTTGACCTCTCATTTGATATCTTTACATTGCGTCTAGTTCTGCTGCATCTGTAGCTGGTTCAGATTGTTATCCTTGCTCAGTGTTTACCTGTTGTTTATAATTGAATTTCTAAGTGTTGTATGACTTGGTGTTGCAAACCAGTATTTTCTTAATTTTTTTATTTTTATGTTTTGGCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42883
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Nonsense | 490 | 2105 | 12 | 40 |
ENSDART00000124584 | Nonsense | 490 | 2066 | 12 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12672741)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12655263 |
GRCz11 | 17 | 12809329 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTGTGTGTAGGATGTTGGGCTCACGGTGTCAGTTCGAAACCCTAATTG[G/A]AGTAGGAGTAAAAGCTCTGATTCTGAGTACAATGTTCACGCTGGAGTCCA
Long Flanking Sequence:
AATAATAGTAGTAATAATGCATTTTATTTCTAATGTGCTTTGCTTAAACCCAAAGAGCTAAAGTAAAAAATAGACACCTCAAACTACAATATAATATCATTTATTTAATGGAAATAAATCTTAAGTATTCAATAGAAAAAATGTATTAGTTTAATTAAAATTAAATTAAATAAGATGTGTATATACCCATAAATACTTATGATAAATACTTTTATGCATTCAATGCTTTTAATTCAATTAAATGTAATGTTTTTTAAACACAATTTTAAATTTTAATTCCATAAAATGTTTTTTTATTTGATTTGATTTTTTTCTTTTAATTTTAGTTTTTTTTTATTTTATTTTTTTAATTTAATTATAACTTTTTTTTTTTTTTACATATTATTATTTTTTTTACATTTTATTTTAAATTTTATTTTATTTTATTTTACCTATCATTGTGAATCTTGTTTGTGTGTGTAGGATGTTGGGCTCACGGTGTCAGTTCGAAACCCTAATTG[G/A]AGTAGGAGTAAAAGCTCTGATTCTGAGTACAATGTTCACGCTGGAGTCCAGGCTACACTACAGGTAAGTGCAGGTGAACTGAAATATAGTGAGTACACTCCTGTAAAGAGCAATGATTGAGGTGTCACCATTGTCCAAAACACAAATCATTTTTAGTCGGAAATTTGAGTTTAGTTGAAGGTATAACTTGTGAAATGTTCTCTCTTCAATCTGGTTTTCCCTCCTTCAGGTTTTTATCACCAATTCCTCTAATGTCTTCCTTCTGGAGGCTGCCAATGAGCTCAAATCACTACTGGAAGAGCATGTGGACATGTGCAAGCGCGTGCTGAACATTTACCGCAGTCTGGTCATGCATGAAACCATGAACCAGAAGACCTGGTATGTCCAATGAGTTTAGAAAGAATTTTAAGTTATTTATCATATAAACTGGAACATATAGACTGGAAAATTATATATAATATATTTTTATGTAAATTTTTTTATGTTTATTTATTTATTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14320
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Essential Splice Site | 838 | 2105 | 19 | 40 |
ENSDART00000124584 | Essential Splice Site | 838 | 2066 | 19 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12690980)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12673502 |
GRCz11 | 17 | 12827568 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YTTCTATGTGAKAGCGTTYATATAGTTGATGACTTTGTSGTGTTGTTTTT[A/G]GGGCATGACGAGGCGCGGCAGTAGCCCAGGAAGTCTGGAGATCCCTAAAG
Long Flanking Sequence:
TCAGTCAACAGCGGCCTCTGGTGGATTTGCAAAAGCAAAAACTGCAAAAAAACACAGCTCATGGGATATGTTTGGAGTTCTCCAGAAAGGTATATGGCGGTCTGTTTTCAGAATGAGCCTGGGTTGCAAACTTGAGTGTGGTGTGCCGAAGGTGAATATAGTAAACTCTGTTACATTAAAGTTGCCATGGCTAATTTTCTAATTATCTATTATATAATCGTCCATCAGCTAGTAATTCATTCAAGTCTTATGTGCAGGGTAAAAGGAACAAAAAATCTTTTCAATATACATTCTCCAAAAACTCCCATAAAGGATTCTAGATATGAACCAAATAAGTTTGAAACTTCATGTCAGCTAAGAACTGCATCATTTAAGCTACTTTAAATTATCCAGCTTTTCACGGTGGTCTTGAAATTTTTATATGAAAGCACACATGTATTATTCATTTAGCTTCTATGTGATAGCGTTTATATAGTTGATGACTTTGTCGTGTTGTTTTT[A/G]GGGCATGACGAGGCGCGGCAGTAGCCCAGGAAGTCTGGAGATCCCTAAAGATCTGCCAGAGCTGCTGAACCGTCAGAACGCCACACGTCCCGCAGACGACCCCGGTGTGCCCTCTGAGTGGACCTCGCCTGCCAGTGCCAGTGGAAGTGACCTCATAAGCTCTGACAGCCAATCGGATTCCTTTAACGCTTTTCAATATGACAGCAAATTCGAAAGTAAGTGGAGTATTCAGTTAAAGGGAAAAGTCAAGTGATGTGCTTGATTCAAGTGCGCTAATAATTCTGACTGTGGTTGATGGCTATGCGTACATGTTCATTGAAGTGTGTTAAGTATAAATGGTCACAGTTGAAAAATGTTTGTGTGCAGATTTCAGCTTCCCCCCTGAGACGTGTGCTTTGGCGTCTGCAGATCAGGATAGTTTGAGTGGGACAGGACAGACAGCGGAGGAACAGGAGCTTTCCAGTCTCACAACACTTCACATCGACTCTGAGACCAGCAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9808
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Essential Splice Site | 909 | 2105 | 19 | 40 |
ENSDART00000124584 | Essential Splice Site | 909 | 2066 | 19 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12691197)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12673719 |
GRCz11 | 17 | 12827785 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCCAATCGGATTCCTTWAACGCTTTTCAATATGACAGCAAATTCGAAAG[T/A]AAGTGGAGTATTCAGTTAAAGGGAAAAGTCAWGTGATGTGCTTGATTCAA
Long Flanking Sequence:
TCGTCCATCAGCTAGTAATTCATTCAAGTCTTATGTGCAGGGTAAAAGGAACAAAAAATCTTTTCAATATACATTCTCCAAAAACTCCCATAAAGGATTCTAGATATGAACCAAATAAGTTTGAAACTTCATGTCAGCTAAGAACTGCATCATTTAAGCTACTTTAAATTATCCAGCTTTTCACGGTGGTCTTGAAATTTTTATATGAAAGCACACATGTATTATTCATTTAGCTTCTATGTGATAGCGTTTATATAGTTGATGACTTTGTCGTGTTGTTTTTAGGGCATGACGAGGCGCGGCAGTAGCCCAGGAAGTCTGGAGATCCCTAAAGATCTGCCAGAGCTGCTGAACCGTCAGAACGCCACACGTCCCGCAGACGACCCCGGTGTGCCCTCTGAGTGGACCTCGCCTGCCAGTGCCAGTGGAAGTGACCTCATAAGCTCTGACAGCCAATCGGATTCCTTTAACGCTTTTCAATATGACAGCAAATTCGAAAG[T/A]AAGTGGAGTATTCAGTTAAAGGGAAAAGTCAAGTGATGTGCTTGATTCAAGTGCGCTAATAATTCTGACTGTGGTTGATGGCTATGCGTACATGTTCATTGAAGTGTGTTAAGTATAAATGGTCACAGTTGAAAAATGTTTGTGTGCAGATTTCAGCTTCCCCCCTGAGACGTGTGCTTTGGCGTCTGCAGATCAGGATAGTTTGAGTGGGACAGGACAGACAGCGGAGGAACAGGAGCTTTCCAGTCTCACAACACTTCACATCGACTCTGAGACCAGCAGCCTTAGTCAGCACGGCCTGTCTGCTGATACTGTCACTATTACTGGTACTCTCTCTCTCAAACTCACTAAAACTGTGTTGGCCTGTGGTATTCAATTTTGGCCTCCAAAGATTAAGAACTGTAAAACTCATATCCAGCATTCTTCCCAGCAGTCCGCAAAGCTTTATTTTATGTGTGAAATAATGTAACCAGGATGGTGTATATTTTAATAATTGGATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23016
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Nonsense | 919 | 2105 | 20 | 40 |
ENSDART00000124584 | Nonsense | 919 | 2066 | 20 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12691377)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12673899 |
GRCz11 | 17 | 12827965 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAAAATGTTTGTGTGCAGATTTCAGCTTCCCCCCTGAGACGTGTGCTT[T/A]GGCGTCTGCAGATCAGGATAGTTTGAGTGGGACAGGACAGACAGCGGAGG
Long Flanking Sequence:
TCACGGTGGTCTTGAAATTTTTATATGAAAGCACACATGTATTATTCATTTAGCTTCTATGTGATAGCGTTTATATAGTTGATGACTTTGTCGTGTTGTTTTTAGGGCATGACGAGGCGCGGCAGTAGCCCAGGAAGTCTGGAGATCCCTAAAGATCTGCCAGAGCTGCTGAACCGTCAGAACGCCACACGTCCCGCAGACGACCCCGGTGTGCCCTCTGAGTGGACCTCGCCTGCCAGTGCCAGTGGAAGTGACCTCATAAGCTCTGACAGCCAATCGGATTCCTTTAACGCTTTTCAATATGACAGCAAATTCGAAAGTAAGTGGAGTATTCAGTTAAAGGGAAAAGTCAAGTGATGTGCTTGATTCAAGTGCGCTAATAATTCTGACTGTGGTTGATGGCTATGCGTACATGTTCATTGAAGTGTGTTAAGTATAAATGGTCACAGTTGAAAAATGTTTGTGTGCAGATTTCAGCTTCCCCCCTGAGACGTGTGCTT[T/A]GGCGTCTGCAGATCAGGATAGTTTGAGTGGGACAGGACAGACAGCGGAGGAACAGGAGCTTTCCAGTCTCACAACACTTCACATCGACTCTGAGACCAGCAGCCTTAGTCAGCACGGCCTGTCTGCTGATACTGTCACTATTACTGGTACTCTCTCTCTCAAACTCACTAAAACTGTGTTGGCCTGTGGTATTCAATTTTGGCCTCCAAAGATTAAGAACTGTAAAACTCATATCCAGCATTCTTCCCAGCAGTCCGCAAAGCTTTATTTTATGTGTGAAATAATGTAACCAGGATGGTGTATATTTTAATAATTGGATTTTCCTTTCAGAAATTGATATTTTTTATTTTTATTAATGTCAGGGTAACAATAACAGCATCCTACAAATTTGTTACGTAGAGTGAACATGAGTTTTCCAGAGAAGCAAAGCACCAAATAAGCACAAAAAATAAACTAAAAAGACAAACAACAAATAATATAAAATCAATTGTTTAGAAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42884
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Essential Splice Site | 1116 | 2105 | 23 | 40 |
ENSDART00000124584 | Essential Splice Site | 1116 | 2066 | 23 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12696290)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12678812 |
GRCz11 | 17 | 12832878 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCAGATCTGATTCCACCTCTGCGGATTCTGACTCCATGGCTTTTCAAA[G/A]TAAGGTTATCACTATTTTACCTTTTTAAGCAAACCCACTTTACTCTTTAT
Long Flanking Sequence:
TGGTGGTGTGTTATCACTTGTGATCAGATTGATGACAATGCATCTTGTGAACGGGTATAAATAGGACTTTATTTTTCATATTGTTCAGAAACCAGCGAGTTTCCCACTGAGGACTGTAGTGTAATGGCTGGTGGCACTCTGACTGGCTGGCATGCTGATGTCGCAACAGTAATGTGGAGGAGAATGCTTGGGATTCTGGGAGATGTCAACTATATAAAGGACCCTGAGATCCATGCGCAGGTTTTTGACTACCTCTGCGAACTCTGGCAGAACCTGGCCAAGGTGAACACACAAAATACACGACTTCACGACTCTGCAAGGATGATTTACAGTGCAGCTAATAATCAAATTCCAGTTGAACAAACGTCCTTCTGCCTCTGTTTTTTATTCCATCGCTGTAGATCAGAGACAATCTCGGGATCTCCCTTGACAACCAGTCGTCTCCGCCACCACCAGATCTGATTCCACCTCTGCGGATTCTGACTCCATGGCTTTTCAAA[G/A]TAAGGTTATCACTATTTTACCTTTTTAAGCAAACCCACTTTACTCTTTATCAAAATGACATAGAATACTGGACATTTATCTTAGACTGTTTAAATAAAAAGACCCAGAATCTGTCTGTCTGTTTTGATATTGAAATTTAAAGCTGAATAAATAAGCTTTAAAATGTATTCTTTTTTAGGATAAGACAATGTTTAGCAATCTGAAAATAATACTAAAAAACCCAGAATGTAGCTTTTAAAGTTGTCTAAATGAAGTGCTTAATCACAAATTGAGTTTTTATATTTTAAGTATTATTATATGTACATTTATATACACATAGAACATGATCTTTACTTAAAATTTTTATCATCTTTAGTGTAAAATCTTACAGTATTTAATAGCGCCCAAAATATACCTGGGCAACATAAGACATAATCACAATCATATTTGATTATTCTATCTATATGTTAATTCTGTTGTACATGGTTTGTTACATTCAGTTGGTTTATTTAATAATTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15393
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Nonsense | 2017 | 2105 | 39 | 40 |
ENSDART00000124584 | Nonsense | 2017 | 2066 | 39 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12774286)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12756808 |
GRCz11 | 17 | 12910874 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAATCGATGCWCCRTGTTTGTTTGACTTTAACTCGCATCTGTCAGCTA[T/A]GAAKARAGGGCCAGATATCTGGAGACGATAGTCCARCATCACTTGGAGCC
Long Flanking Sequence:
CATTGCATATGCTGTGATGTGACCATTGCGAATGATCACATTGCAATATCGATGCTGAAACTATATATTGTGCAGCCCTACTTCATTTCTCCAGTGACGCAACATTCAGTGTCATCCGAACTCATGCGCTCTTGGTTTACAGAGTTATGAATGCAACGAAGACCATATGCCAGCGAACTACTTAATCAAATCGTTCCCCATTAACAGAATCCCTCCGTTTTTAAACCCATACACAGAGACATAATCCAATCCCTTCCATTTGCCCAATACCATCATTTTTCTTAACCGAATAACACAGACAGTAAGATGTCAATTGATACCCAGTGTCACCATTCGTAAAGCAATGACAGCTTTGTAATGCGGTTTACAGAGCAATGGGAGAATTGTTAACCCATGGCATCCTGGCTAACTGTTTGACCACGCTGTATTGATGTGTTTGTGTTGCTGTTTTGAAATCGATGCACCATGTTTGTTTGACTTTAACTCGCATCTGTCAGCTA[T/A]GAAGAGAGGGCCAGATATCTGGAGACGATAGTCCAACATCACTTGGAGCCCACGACATTTGAGGACTACGCCGCTCGTGTCTTTTGTCCTGCGCCTTTCCACTATCTTCCGTCTGAAGCAGGTGGGCGATTGTTGAATTAATGAATGAAATGATCATGTGATCTGTCAATGTGCACTGCTCACCATTCACAATTACATCAAGTTACAGACTCTCTGACCCTAAAGGGTTTGTTCACACCAAAATCATCCTCATGTCTTTGCAAACTAATGAGAAATTAATTGATCTTCAGAACACTAATTGAGATACAGTTGAAGACAGAATTATTAGCACTCCTGAATTATTAGTATATATATATAGTGCTTAGCATAATTGAGTACACCTAGTTTAGAAAATGAATATTTGTATCCATTTCTTAGTAAATATAGGCAATATATTTTGGTGCATTTAAACAAAACAGATTTATTAATATAATATTTATTAACATATATTTTAGTCACCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11505
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112469 | Nonsense | 2019 | 2105 | 39 | 40 |
ENSDART00000124584 | Nonsense | 2019 | 2066 | 39 | 40 |
Genomic Location (Zv9):
Chromosome 17 (position 12774290)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 12756812 |
GRCz11 | 17 | 12910878 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCGATGCWCCATGTTTGTTTGACTTTAACTCGCATCTGTCAGCTATGAA[G/T]ARAGGGCCAGATATCTGGAGACGATAGTCCARCATCACTTGGAGCCCACG
Long Flanking Sequence:
GCATATGCTGTGATGTGACCATTGCGAATGATCACATTGCAATATCGATGCTGAAACTATATATTGTGCAGCCCTACTTCATTTCTCCAGTGACGCAACATTCAGTGTCATCCGAACTCATGCGCTCTTGGTTTACAGAGTTATGAATGCAACGAAGACCATATGCCAGCGAACTACTTAATCAAATCGTTCCCCATTAACAGAATCCCTCCGTTTTTAAACCCATACACAGAGACATAATCCAATCCCTTCCATTTGCCCAATACCATCATTTTTCTTAACCGAATAACACAGACAGTAAGATGTCAATTGATACCCAGTGTCACCATTCGTAAAGCAATGACAGCTTTGTAATGCGGTTTACAGAGCAATGGGAGAATTGTTAACCCATGGCATCCTGGCTAACTGTTTGACCACGCTGTATTGATGTGTTTGTGTTGCTGTTTTGAAATCGATGCACCATGTTTGTTTGACTTTAACTCGCATCTGTCAGCTATGAA[G/T]AGAGGGCCAGATATCTGGAGACGATAGTCCAACATCACTTGGAGCCCACGACATTTGAGGACTACGCCGCTCGTGTCTTTTGTCCTGCGCCTTTCCACTATCTTCCGTCTGAAGCAGGTGGGCGATTGTTGAATTAATGAATGAAATGATCATGTGATCTGTCAATGTGCACTGCTCACCATTCACAATTACATCAAGTTACAGACTCTCTGACCCTAAAGGGTTTGTTCACACCAAAATCATCCTCATGTCTTTGCAAACTAATGAGAAATTAATTGATCTTCAGAACACTAATTGAGATACAGTTGAAGACAGAATTATTAGCACTCCTGAATTATTAGTATATATATATAGTGCTTAGCATAATTGAGTACACCTAGTTTAGAAAATGAATATTTGTATCCATTTCTTAGTAAATATAGGCAATATATTTTGGTGCATTTAAACAAAACAGATTTATTAATATAATATTTATTAACATATATTTTAGTCACCAAACA
Associated Phenotype:
Not determined