Busch Lab

ZMP

si:ch73-140j6.1

Ensembl ID:
ENSDARG00000076499
ZFIN ID:
ZDB-GENE-090312-168
Human Orthologue:
USP53
Human Description:
ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:29255]
Mouse Orthologue:
Usp53
Mouse Description:
ubiquitin specific peptidase 53 Gene [Source:MGI Symbol;Acc:MGI:2139607]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa19503 Nonsense Available for shipment Available now
sa39617 Nonsense Mutation detected in F1 DNA Not yet available
sa32683 Nonsense Mutation detected in F1 DNA Not yet available
sa39616 Nonsense Mutation detected in F1 DNA Not yet available
sa14536 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa19503
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109714 Nonsense 29 1029 1 16
ENSDART00000145012 Nonsense 29 391 1 9
Genomic Location (Zv9):
Chromosome 1 (position 24768606)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 25220377
GRCz11 1 25911206
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACATGTCTGGCACAGGTGCAAGGAGTGGGACGGGGCTGAGCAAGTCCTA[T/A]CAGCCGGGCAGCATGATCTCTCTCGCTTTGACCAAAGGACTTCTAAATGA
Long Flanking Sequence:
GATTTGTTCTTCTATCTGCGTCCATCCTCATATTGCCTGTGTGCCTGGATGCAGAGGAATCCACACATGCAGTGGAGACAGAGCCAGATCATTGTTATAGTAACTGCTGGACTGATAAAGCAATGTGCTTCAACTTGTGGCTGAATGCCACATGCTTGCGTTAAATGTAAAGCAACTGAATAATTTCTTATATCCCAATGGTGTGCTGTCAAATTCTGCACATCGAAAAAAAATCTGTTGCAATATATTTTGCTCTTTTGTCGGGGGGCATTATACAGTTGGCTTTCAGCTACAGGGACTGCCAGGACTAATGTTGCCTAAAACAGATCCATCAGCCTCAAGTTGCTCAAGATCCATCAGCCTCAAGAGTAATTGACTGGTTATTTGCTGGAGAGAGGGCCAGGCTCCAACCTCATGGCATGGGTCAAACTGTTTAAAAAGCCTGGAGGCAACATGTCTGGCACAGGTGCAAGGAGTGGGACGGGGCTGAGCAAGTCCTA[T/A]CAGCCGGGCAGCATGATCTCTCTCGCTTTGACCAAAGGACTTCTAAATGAGCCAGGCCAGAACAGCTGCTTTCTCAACAGTGCGGTGCAGGTGAGTGAAGCTATATTGAAAACCTACTGTATGCTGGTGTACAATTGAACAAACACTGAAACTGAATATAAAATATTCTTTAAATGGGGTGGAATGTGTGACCCTGGACTTGAAAACCATTTATTGGGGTAATTGTCTATAGATACGCCACATGAAGACAGAATCAAAAATCTGTTGAGATAGGACATTATTTGGCTAAGATATAAGATAAAATCTGTAATCTGAGGGTTAAAAAATAGAGAAATTTGCATTAAAAAGACATTGAAATTGTGGCATTCACTCGAGTAAATTATGATGTTGATTTTTATGCGTTCACTAGAGGAAATAATATGATTAACGCTAGCTCCACAGCTAACTATCAGGCACCTGTAGAGTTAATGCGTTCCAGTAAAATATAGCTATACAAATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39617
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109714 Nonsense 476 1029 12 16
ENSDART00000145012 None None 391 None 9
Genomic Location (Zv9):
Chromosome 1 (position 24721139)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 25172910
GRCz11 1 25863739
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATCTGAATTGCTTACTAATGAAAATTATTTTGATTTCAGATATGACATA[T/A]CCACGCTTATCCTCTCCACCTGAGAATGGCCCAAGGTTTCATTGTGAGCA
Long Flanking Sequence:
TCTCTTCAGCTTAAAAGGATGCTGTTTGCTCGCTCCAGGTGTGCTTATATGCTGGGATAATTGGCAATGAAGCACACCTGTGCAAGCTTACGCTGCCAATTCATTGCATTCATTGGCCCATTCAATACTTTTTCAGACAAGCGGCTTCTGATCCGAATCCTCCCATTCGTGGATTTCAATCAATCCACTCTATGGCACTTCCGTTCCCCTCCTCGGGGAACGAAGGGTTACTTCTGTAACCTCGAACGTTTGTGCCTCATTTTGTGAGCCAACTGACAGTTGTTCACTTCCCTTTTTTCTCTGCTTTGCTGGCCATGCCCAATCGCAGCACTCCACACCCATCATAAAGCTTTTTTTTTTTTTAAATCTAAGGTACACTTGAACTAAAAGAAAGGGATTTCATGACCCTTTAAAACACACACAGCAACCCATTGATTATCTCAAACTTATAATCTGAATTGCTTACTAATGAAAATTATTTTGATTTCAGATATGACATA[T/A]CCACGCTTATCCTCTCCACCTGAGAATGGCCCAAGGTTTCATTGTGAGCAGAGGCCGCGAACTTTGCCCTCACGGGTCTCTCGAACTGAGCACTCTTCTGTTCATCCTCGTGTATCACCCCAGGAGTCTCGCTCAAACCAGGGGATGGCATCTGGAGTCAGTCGTCACGCTGATTCATCATCGCTTTCCCATCGTGGCTCCACAAATCCCACTGAGCGTGGCAAGTCCAAGCCCTCATGGAGACCAGTACGGGAGGTCCTCAATGTAGACAGTGTGCTGAGCGAACTAGAGCGACGACAGCAGCAGCAACAGCAGCAACAGCGTGGAAGCCCTCGATGTGTGCGTCGATTCGCCCATGAGAGGGGGCTGATGAAGGACAAGCAGAAGGGTCTGATGACTATTTATGAAGATGACTCACGGCTGGAGACTGAAAGTCAAAGCTCCCAGGAGTCTCAACGACAGATGATGGTGACCAGGTCTAAAGGTGGAGCAAATGTAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32683
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109714 Nonsense 583 1029 12 16
ENSDART00000145012 None None 391 None 9
Genomic Location (Zv9):
Chromosome 1 (position 24720820)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 25172591
GRCz11 1 25863420
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAGTGTGCTGAGCGAACTAGAGCGACGACAGCAGCAGCAACAGCAGCAA[C/T]AGCGTGGAAGCCCTCGATGTGTGCGTCGATTCGCCCATGAGAGGGGGCTG
Long Flanking Sequence:
CAATCGCAGCACTCCACACCCATCATAAAGCTTTTTTTTTTTTTAAATCTAAGGTACACTTGAACTAAAAGAAAGGGATTTCATGACCCTTTAAAACACACACAGCAACCCATTGATTATCTCAAACTTATAATCTGAATTGCTTACTAATGAAAATTATTTTGATTTCAGATATGACATATCCACGCTTATCCTCTCCACCTGAGAATGGCCCAAGGTTTCATTGTGAGCAGAGGCCGCGAACTTTGCCCTCACGGGTCTCTCGAACTGAGCACTCTTCTGTTCATCCTCGTGTATCACCCCAGGAGTCTCGCTCAAACCAGGGGATGGCATCTGGAGTCAGTCGTCACGCTGATTCATCATCGCTTTCCCATCGTGGCTCCACAAATCCCACTGAGCGTGGCAAGTCCAAGCCCTCATGGAGACCAGTACGGGAGGTCCTCAATGTAGACAGTGTGCTGAGCGAACTAGAGCGACGACAGCAGCAGCAACAGCAGCAA[C/T]AGCGTGGAAGCCCTCGATGTGTGCGTCGATTCGCCCATGAGAGGGGGCTGATGAAGGACAAGCAGAAGGGTCTGATGACTATTTATGAAGATGACTCACGGCTGGAGACTGAAAGTCAAAGCTCCCAGGAGTCTCAACGACAGATGATGGTGACCAGGTCTAAAGGTGGAGCAAATGTAGCACAGCGAAGTGATAACTGGGTAATACAGAGGACAGAGTCAGGATATGAGAGCAGTGATAGGCTGAGCAGCGGCTCTACCAATCCTGACTCACCTGGAGTTGAGAACTTTACCGGCAAAGAGCTGAGACTCAGTCAAGATGCACAGCACCTCAGGTAGGAGAAATGAAGTAATGATGTGTATGTTATTTATTCTTTGAGTTACTTGCTCTTGATTTAGTGATGTATTCCCTCAGGGATCAAGGCCATAATAATCAAGATGACTCAAAAATGGAGGCGGCGCGTTCTCCACTGTACCACGGTAAGTATTAACGTTACACCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39616
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109714 Nonsense 794 1029 15 16
ENSDART00000145012 None None 391 None 9
Genomic Location (Zv9):
Chromosome 1 (position 24712908)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 25164679
GRCz11 1 25855508
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGAAAGCCCATTACTGCGCCGCCTGGGCAAGATCAGCAGTTCAGAGTG[T/A]AACAGTTCTGATGAACTCACTAACCCTCTGTCAGAGCAGGAGGACAGTGC
Long Flanking Sequence:
TAACTTGCCTCATTACCCTAACCTGCCAAGTTAACCTAATTAACCTAATTAAGCCTTTAAATGTCACTTTAAGCTGTATAGAAGTGCCTTGAAAAATGTCAAAAATTATTTACTGCCATCATGGCAAAAAGAAAATAAATCACTTTTTTGAAATGAGTTAAGAAAACTATTATGTTTAGAAATGTTTTAAAAACATTTCGCTCCGTTAAGTAGAAATTGGGTAAAAAATAAACAGAGGGTATAATAATTCAGAGGGGCTAATAATTCTGACTTCAACTTTATATATCTAAAAGTAAAATAAATTACTAAATGAGATTGCTCATGTTTCACAGAAGGAAGCTTCGATATTCATCCTGTGGTACCAGGAAAGCAGGCAACACAGAGAAAGACCCGTCAGGTGTGGATCTTCCACCAGAGCAGCAGGAACTTTCCATGCAATGGCACCACAGCCCAGAAAGCCCATTACTGCGCCGCCTGGGCAAGATCAGCAGTTCAGAGTG[T/A]AACAGTTCTGATGAACTCACTAACCCTCTGTCAGAGCAGGAGGACAGTGCTTATCGTTCCAGCACCAGTGAAGTCGCTCCACATGAGTCACCGGGTCCCAATCGCTCTAGTTACCCATGGGAAGAATCAGCCATCCAATCAGGACCCTCGATTGCAAGCCACTCCAAACACGCTCAGCGACCGATCGAGATAAAGACTCCACCTTTCCGCCCCAGAATCTTACAGGAACCATCTCAAACAGCTTCAAGAGCATCTGGCCGTGGTGCTCCATCATCTTCACACAGTGGCGCAGTACACAGGCGAATGGAGATCAATGGCACGTGCCCCAGCTCGTCAGACGTGAGCTCAAAATCGGGATCAGACCAGGAAAGAGGGGAGCAGGTGTCCAGCGAGCCCGAGGGTTGGGATAAGCCATCTTCTTCTGTGTCTCCAGGATCTGGAGTGGCGCTGACCACTTATTTCTCTGTGGATAATTGCATGACAGACACCTACAGACTGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14536
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109714 Nonsense 812 1029 15 16
ENSDART00000145012 None None 391 None 9
Genomic Location (Zv9):
Chromosome 1 (position 24712854)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 25164625
GRCz11 1 25855454
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTTCTGATGAACTCACTAACCCTCTGTCAGAGCAGGAGGACAGTGCTTA[T/A]CGTTCCAGCACCAGTGAAGTCGCTCCACAKGAGTCACCGGGTCCCAATCG
Long Flanking Sequence:
CTTTAAATGTCACTTTAAGCTGTATAGAAGTGCCTTGAAAAATGTCAAAAATTATTTACTGCCATCATGGCAAAAAGAAAATAAATCACTTTTTTGAAATGAGTTAAGAAAACTATTATGTTTAGAAATGTTTTAAAAACATTTCGCTCCGTTAAGTAGAAATTGGGTAAAAAATAAACAGAGGGTATAATAATTCAGAGGGGCTAATAATTCTGACTTCAACTTTATATATCTAAAAGTAAAATAAATTACTAAATGAGATTGCTCATGTTTCACAGAAGGAAGCTTCGATATTCATCCTGTGGTACCAGGAAAGCAGGCAACACAGAGAAAGACCCGTCAGGTGTGGATCTTCCACCAGAGCAGCAGGAACTTTCCATGCAATGGCACCACAGCCCAGAAAGCCCATTACTGCGCCGCCTGGGCAAGATCAGCAGTTCAGAGTGTAACAGTTCTGATGAACTCACTAACCCTCTGTCAGAGCAGGAGGACAGTGCTTA[T/A]CGTTCCAGCACCAGTGAAGTCGCTCCACATGAGTCACCGGGTCCCAATCGCTCTAGTTACCCATGGGAAGAATCAGCCATCCAATCAGGACCCTCGATTGCAAGCCACTCCAAACACGCTCAGCGACCGATCGAGATAAAGACTCCACCTTTCCGCCCCAGAATCTTACAGGAACCATCTCAAACAGCTTCAAGAGCATCTGGCCGTGGTGCTCCATCATCTTCACACAGTGGCGCAGTACACAGGCGAATGGAGATCAATGGCACGTGCCCCAGCTCGTCAGACGTGAGCTCAAAATCGGGATCAGACCAGGAAAGAGGGGAGCAGGTGTCCAGCGAGCCCGAGGGTTGGGATAAGCCATCTTCTTCTGTGTCTCCAGGATCTGGAGTGGCGCTGACCACTTATTTCTCTGTGGATAATTGCATGACAGACACCTACAGACTGAAGTATCACCACCAGAGGCCATTGGTCCTCTCCATGCCTGAGCCTAGAGGAGCTGG
Associated Phenotype:
Not determined