ZMP

SHROOM2 (2 of 2)

Ensembl ID:

ENSDARG00000076371

Description:

shroom family member 2 [Source:HGNC Symbol;Acc:630]

Human Orthologue:

SHROOM2

Human Description:

shroom family member 2 [Source:HGNC Symbol;Acc:630]

Mouse Orthologue:

Shroom2

Mouse Description:

shroom family member 2 Gene [Source:MGI Symbol;Acc:MGI:107194]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa4439	Nonsense	F2 line generated	Not yet available
sa6222	Nonsense	Mutation detected in F1 DNA	Not yet available
sa35165	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa4439

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111271	Nonsense	117	1425	3	9

Genomic Location (Zv9):

Chromosome 11 (position 45287307)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	43889574
GRCz11	11	44191364

KASP Assay ID:

554-3547.1 (used for ordering genotyping assays)

KASP Sequence:

TCAGAAATATGGAAAGCGTAGAGCCCTCATCTCATGCTTTCTCAAAAGAA[C/T]AACCTTTAACAAGCAAACCCAATGGAGGAGCAGATCACGAGGTGCTTGAA

Long Flanking Sequence:

CCCGGAGGAAACCCACGCGAACGCAGGGAGAACATGCAAACTCCACACAGAAACGCTTAAGTTCATGACCCCTTTAAATTGTCTTGTGGAAAAGGAACTAGTTGTTACTCCTTCACTATGGCCTAATTTGAAGCCATAGTCATTCTGTCTGTTTGCATTTCAGGAGGAATGAATCGTCATGTAGACCCCATTCATGGCACTCAGCTAAATCCTCGGAAAGCTCCAACCCAAACGACTCCAAATCTGAACCCAACCCAGCACCTGACCCCACTTGGCAGACAAAATGTGATCCTGGGTGAGATTCTGAGTATGTCTATGCAATTGATGTATGAACTGAACTCAGTCAGCATTATCAATTATACTTGTTTGTCACCAGGTCACCCACAAAAGAATTCACCAGCTGTTGGGGACAGACCAATCTGCGACAAGCATCCTGCCAGTTCAGCTCGGTCAGAAATATGGAAAGCGTAGAGCCCTCATCTCATGCTTTCTCAAAAGAA[C/T]AACCTTTAACAAGCAAACCCAATGGAGGAGCAGATCACGAGGTGCTTGAAAGTGCAATCAGCAAACCTGCTTTGCCAGGCAATGCATTTTCAGGCACAGCTGATCATGGTGCACCTCGGGGTGCCAATCCCACAGAAGGGGTGTTTTACAGAGGCGATCTAACAGTCCCGAGTGACTGCCACAGATACCTGCAGATCCCCATAGGCAATGGGGGACGAGTGAGTCCCAGTGTTGAGGAGCAATCTAGCTCCAGACTCTCCTCTACTGCGAGATCAAACCATAGACCTGTGTGGCATATTCCAGAGAATAAGATGTCCAGTTCTGAAGCTCCTCCTGCTCCTCCTTTGCGGAGTGATAGTTTCACTGCCACCAGAGTTCATGAGAAGAGCTTAGTGGGATTGTTCCCTGAGGGACACACTGTATATCCACTACAGAGACCTCCCTGTAGAGCTGTGGACAGACAATTAGAGGACGTGAGACACAGCTACAACTCGCCTCCA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa6222

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111271	Nonsense	178	1425	3	9

Genomic Location (Zv9):

Chromosome 11 (position 45287124)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	43889391
GRCz11	11	44191181

KASP Assay ID:

554-5084.1 (used for ordering genotyping assays)

KASP Sequence:

CAGAAGGGGTGTTTTACAGAGGCGATCTAACAGTYCCGAGTGACTGCCAC[A/T]GATACCTGCAGATCCCCATAGGCAATGGGGGACGAGTGAGTCCCAGTGTW

Long Flanking Sequence:

GACCCCATTCATGGCACTCAGCTAAATCCTCGGAAAGCTCCAACCCAAACGACTCCAAATCTGAACCCAACCCAGCACCTGACCCCACTTGGCAGACAAAATGTGATCCTGGGTGAGATTCTGAGTATGTCTATGCAATTGATGTATGAACTGAACTCAGTCAGCATTATCAATTATACTTGTTTGTCACCAGGTCACCCACAAAAGAATTCACCAGCTGTTGGGGACAGACCAATCTGCGACAAGCATCCTGCCAGTTCAGCTCGGTCAGAAATATGGAAAGCGTAGAGCCCTCATCTCATGCTTTCTCAAAAGAACAACCTTTAACAAGCAAACCCAATGGAGGAGCAGATCACGAGGTGCTTGAAAGTGCAATCAGCAAACCTGCTTTGCCAGGCAATGCATTTTCAGGCACAGCTGATCATGGTGCACCTCGGGGTGCCAATCCCACAGAAGGGGTGTTTTACAGAGGCGATCTAACAGTCCCGAGTGACTGCCAC[A/T]GATACCTGCAGATCCCCATAGGCAATGGGGGACGAGTGAGTCCCAGTGTTGAGGAGCAATCTAGCTCCAGACTCTCCTCTACTGCGAGATCAAACCATAGACCTGTGTGGCATATTCCAGAGAATAAGATGTCCAGTTCTGAAGCTCCTCCTGCTCCTCCTTTGCGGAGTGATAGTTTCACTGCCACCAGAGTTCATGAGAAGAGCTTAGTGGGATTGTTCCCTGAGGGACACACTGTATATCCACTACAGAGACCTCCCTGTAGAGCTGTGGACAGACAATTAGAGGACGTGAGACACAGCTACAACTCGCCTCCAAAGAAGGACTACCTTGAGCCATACCTTCCAGTTGAGGACTACCCAAATCAGCTAAACCCTACCAAACTCTTTTCCCTGTCAAGCACTGATGTAAGACAAGGCCAGAATCCGTTTGCCTCTGAGTTTCAGCATCAGAGACAGCACAGTGATGATAGTCCATTTTCTGTGTATAACAACTCTACA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35165

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111271	Nonsense	715	1425	3	9

Genomic Location (Zv9):

Chromosome 11 (position 45285513)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	43887780
GRCz11	11	44189570

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAGTTGAAGATAAAGCTGGCGGGTCTTTTGCAGACCGATACAAGTTCTTT[G/T]AAGGTTCTGGCAAAGCGGTTGTCCAAAAGCCCATTCCAAAGCAGTCCCTG

Long Flanking Sequence:

TTACAACAGCCTCCAAAGGAGGTAGTCATGAATCAAGTGATGCCAGCAGTGGAAAGCTGGGAAGACGAAGTGACCGCTATGCCACAACTTTACGCAAAGAGATTCAAAAGAAGAGGGCTCAACTTCAAAAAAGCAGAAGCGCAGCTACCTTGACTTGCTCAACTGAAGTTGAGGAGGACTCTGACATATGGAAGTCCAATGAAACCTCCACATCCTCTTCTGATGGTTCCTTTACTAACACGTACAAGGATCATCTGAAGGAAGCCCAAGCCAAAGTTCTACAGGCTACATCATTCATGAGGAAAGATCTGGAGCTTCCTGGGAATGAAGTTGTGTCTGCTCAACTTCCCAAAAGACCTGGGCAAGTCACCCGCATTGGAGGTCGTAAACGCTTTCCCATGGATAAAAAAATACATTCCTTCTCTGAACCGGACAAGATCAATGAGGTCGGAGTTGAAGATAAAGCTGGCGGGTCTTTTGCAGACCGATACAAGTTCTTT[G/T]AAGGTTCTGGCAAAGCGGTTGTCCAAAAGCCCATTCCAAAGCAGTCCCTGCTTGGTCCTACTGTAGACCACAGTGAGAGAAAGACTGGAGAAGGTGAAAGTATCCCTCGAGTACTGTTAAAGCAAAGTAAATCCAGCCATTCTGACCTTAATGCAGATGAGCAACAAAGGCTTGGTACATTTGCAGAATATGAGGCTACATGGAACTTGCAGAAGAAGCAAGTGGAAAGAAGAAACACAGGCAGATACCATTCAGCTGAAAATATTTTGGACTCAGGCTTGGAGGAATCCAACAGTGCACTGTGTGTGCATGAAAGATCACGCTCCTCACCTTCTGCTGACTTCTATGGACAGGTAAGAAGAAAGATTGAATGTACTGTTTAGCAGTAGTTGCAAACGCCCTAATTGTATAAAATTGCACTTGCAAGGTTGTAGGTTCAGTTCCTAGTACTGGCAGAGATTGTAGTGGGGGGAATATATTAATGGTGCTTTCTTCCATTC

Associated Phenotype:

Not determined