ZMP
zgc:175202
Ensembl ID:
ZFIN IDs:
Description:
Zgc:175202 protein [Source:UniProtKB/TrEMBL;Acc:B0JZN4]
Human Orthologues:
CCDC88A, CCDC88C
Human Descriptions:
coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:25523]
coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:19967]
coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:19967]
Mouse Orthologues:
Ccdc88a, Ccdc88c
Mouse Descriptions:
coiled coil domain containing 88A Gene [Source:MGI Symbol;Acc:MGI:1925177]
coiled-coil domain containing 88C Gene [Source:MGI Symbol;Acc:MGI:1915589]
coiled-coil domain containing 88C Gene [Source:MGI Symbol;Acc:MGI:1915589]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa17648 | Nonsense | Available for shipment | Available now |
sa22541 | Nonsense | Available for shipment | Available now |
sa42447 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa30679 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa22542 | Essential Splice Site | Available for shipment | Available now |
sa45524 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa2750 | Nonsense | Available for shipment | Available now |
sa30985 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa17648
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | None | None | 983 | 3 | 30 |
ENSDART00000112470 | Nonsense | 78 | 1603 | 3 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48639801)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46717460 |
GRCz11 | 14 | 45704752 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TKGTTGYTTGYTTGGGTTTTTTAWYCAGTGATCCCAATCCAAAGGTAGAA[C/T]AAATCTACCACAATGTGGGCGACGACAAGATTCGCAGAGTGCAGAACTTT
Long Flanking Sequence:
TACCATAACAGATAAATTCATGTACTTTACTATAGTGTGGTTGAAAGAAAAGTGTTTACTATAAACTATAAATTACTATTGTATGTTTTCTTGTTGGAGCAACTGAAGTAAACTTAATGTAAGCATTGACAACAGAGCACAGAATCTTGATGTGAACAGAGTGTTTATGATTTAAGGTGCATCTGTTTGAGGGTATTGTCGGTGAGGAAGAGGATGGATCACTCTTTCCGGAATACATGGAAGTAAACATCAGCTCCCAGAATGCAGTAAGGCAGTACCTGACGCTCACCAATGGAGTTTACCTCAATGAGGTCATGAGGATCATGTAAGACGGACTCGTTGTAAAAATAGAAAACATTTCCTCAGTTTTGTTTTTATATAATGTTGTTAAAAAGAAAGCTATCATTGATTACAGTTCAACAGTGACTCGTCATCTAATGGCAACATTTTTTGTTGTTTGTTTGGGTTTTTTATTCAGTGATCCCAATCCAAAGGTAGAA[C/T]AAATCTACCACAATGTGGGCGACGACAAGATTCGCAGAGTGCAGAACTTTTCCATCCTCAATCGCCACTTAAGATCTTACTATCAGGTACTGAAGTAACATATCAGTCATATTATTATGTGACATTATGTCTATGTATCCAGTACATTTCACTATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTTTATATTATATTATATTAAATTATATTATTTTATATTAAATTATATTATATTATATTATATTATAATATTTTATATTAAATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTTTATATTAAATTATATTATATTATATTATATTATTTTACTTTATATTATATTAAATTATATTATTTTATATTAAATTATATTATATTATATTACTTTATATTAAATTATTTTATATTATATTATATTACAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | None | None | 983 | 7 | 30 |
ENSDART00000112470 | Nonsense | 211 | 1603 | 7 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48654898)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46732557 |
GRCz11 | 14 | 45719849 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGACTGAACGGAGCCGAGCTGCAGATTCTTTTCTGCTCAATGGCCAAA[C/T]AGATCCAGAACCTGCTAGCCCAAAGAGACACACAGCTGGAGGTCAGAGAA
Long Flanking Sequence:
TCAACTGGTTCACTTGGGACTCGAATCAGTGACCTTCTTGCTGGAAAGCACAGGTGTCAAATGCAGCTCCTGGAGAGCTGCAGCTCTGCACAGTTTAGCTTTAACCCTAATTAAACACACCTGTTCAAACTAATTGAGTCCTTCAGGCTTGTTTGAAACCTACAGGTAGGTGTGTTGAAGCAGGGTTGGAACTAAAGTGTGCTGAGCAGCAGCCACCATGCCACCCGTAATCGTTTTTACAAATTTAAGTGGATTGAACATAAAACAATTAGGTTTCCCCCCCCCAAAAAAACCTTAAGAATTGAAGTTGCTTTAACTCATTTTACATAAGTAGTTTAAACAAGCAGCAGAATAATTTTTTTCAGTGTGTATATGCCTAAATCATACCTTTTGATCATTAGGTGACCCAGGACCGAAGTGCAGTCCTTCCTCTGGAGTTTGGAGATCTGTGTGGACTGAACGGAGCCGAGCTGCAGATTCTTTTCTGCTCAATGGCCAAA[C/T]AGATCCAGAACCTGCTAGCCCAAAGAGACACACAGCTGGAGGTCAGAGAACAACTGATCTTCACAATCTGGCATTTTCATATGCAAGTAGGTGAGATCTGATTTTTGCTTTTGAATGTCGTGTCTGATATTTAGAGGATAGCAGAGCTTTGTCAGGAACAGGAGTCATCTGTAAATCATATAAACACATCGAGCGGGTTTGGAGATGGATCTCCTGAAGGACTGGCCTTTCAGCTGGCGGAGAGCAAAGCTAAACTACGGCGACTCAAGCAGGAGCTGTGAGTTTATTTTTATAATGGTTTATGTCAGTGTTTCTCAACCACGTTCCTGGAGAACCATTTTCCATGTCTCCTTAATCAAACACACCTGATTCCGATCATTAGCACAGACTGAAAGACTTGTGTGATAGATGAAAGAGACATTTAAAACAAGCAGTGTTGGTTGTCCTACAGGAACATGGTTGAAAAACACTGTTTTTTTATGAAGATATGTGTCAGTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42447
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | None | None | 983 | 12 | 30 |
ENSDART00000112470 | Nonsense | 408 | 1603 | 12 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48663775)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46741434 |
GRCz11 | 14 | 45728726 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATTTTGACCAACTGTATGATTGTTTGTGTAGGAGCGGGATGTGGAGAGA[C/T]AGCGGGTGGACGAGCTGCTGGAGATGAACATGAGTCTGCAGGTGGATCTG
Long Flanking Sequence:
TCTTACCTTTTTTTCTCCATTTTTTTTCCTCCATTGTGTTTTTTAACACATTTCTTAACCGTCATTCATTTTCTTTCCGCTGTGGCGACCCCAGAATAATAAAGGGACTAAGCCGAAAAGAATATGAATGAATGCCCTTCTGGCTGCAACCCATCACTGGGAACATCCATACACACACATTCACATACATATACTACGGACAATTTAGCTTACCCAATTCTCCTATAGCGCATGTCTTTGGACTTGTGAGGGAAACCGGAGCACCCAGAGGAAACCTACGCCAACACAGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGACTCAGCTAAGGCTCAGTGACCTTCTTGCTGTGAAGCGATCATGCTATCCACTGCGCCACCGTGACGCCCTGTTGAACATCATTTGGGACTTACTTGAAAAAGAAAAAATTTCAGCAGTGCGAATAATTTTGACCAACTGTATGATTGTTTGTGTAGGAGCGGGATGTGGAGAGA[C/T]AGCGGGTGGACGAGCTGCTGGAGATGAACATGAGTCTGCAGGTGGATCTGAAGCGCCAGGTTCATTCTGCAGGTGTCAATCAAAGTGTGACTCATCAACATTTCCTCCAATCAGAGCTAGAGTCTGACGAGGATGTTCAGGAAGTAAACATGCCCGAGATTGGTAGGTTTAATTATGCATGATTTGATATTATGGTGTTTGATATTATGACTCACATGGCATTGCTACACTGTTGAATTCGTAATTTAATGAGTAGATATCAATCACTTTTATGCAAATCAGCCCGTCAGGATTAGAAATAGACATTTATGAATACATTTACATTCCGCCCTATCGATAAATCATCCACCTTCATGTTGTTTCAGATCTCTGTGTTGTTCGTTCTTCTGTAATGCATGGAAGGAATAGATTGGCCTTGTCCTGGATGGCCTTTTCTGTATAGTGAAAATAAATAGGAAAAGATAGAAAATAAAACTTTAATGTTGCTGTTTTTGAAGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30679
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | None | None | 983 | 13 | 30 |
ENSDART00000112470 | Nonsense | 499 | 1603 | 13 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48667241)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46744900 |
GRCz11 | 14 | 45732192 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAACGAGAACGCCGAGCTGAGACGGCGACTGGAGCTCCTGCAGGCTGAA[C/T]AAGAGGTCAGCGGATGTTTGGCCAGATTTATCCTCAGGCTACCACCTGGC
Long Flanking Sequence:
AGTGGGTGGACGGGTCAATCAGTGCTTTTGAAAACACTGTCGGTTGGGTTTAGGGAAGGAGGAAGGTGGGTCAGTCGATCGGTCAGTCGACAGCGGCCTCTGTTGGATTTTCAGAACAGCAGGCGTGAATAGCACGCGAATGGGAAATTTGAGATCTCAAAAAGCGTACACAGCGGCAACTGGTGGATTTGCGAAAACAAAAACTGCAAAAAAACGTAGCTCCTGGAACGTATTTGGCATTCTCCAAAAATGTAAATAGGGGAACAGAATGAGCTTTCAGAATGAGCTTGGATTGTTTTTTTAGAGTGTAAGTAGGTTTATGAAAAAATGCCCTTGGAAATCAATCCTGACCTTGAAGTGTGTTTGTGCGTCTCTCTTACTTTGGTTCAGATCTGAAGCCCCTGAGTGAGGAGGTAAATGAGGCTTCCTCGTTGAGGCTTCTGGGAGCTGAAAACGAGAACGCCGAGCTGAGACGGCGACTGGAGCTCCTGCAGGCTGAA[C/T]AAGAGGTCAGCGGATGTTTGGCCAGATTTATCCTCAGGCTACCACCTGGCTGATGTTAATTCTCAGGTCTCCCATGTACTGTATGTCTCTCTCTCTCTCTCTCACACACACAGGCTCAGCAGGGCCCAGAGAAAACCCAAGAGCTCCAGAGACTCACAGAGCAGCTCTCACAAAAGCTTCAAAACACCCTCAAGGAGGTGAGCCACTTCTGACAGATTTAAGGAGCGTTTTTTCCTTCTTTTTTCTGTGTCTACTGTCATTTTGTCCCCGTTTCAACTTTTTGAATCGGGCCCTGTCATTTCTCTTTTAACCGTTAGCTGGAGTGTCTGAAGAATGAAAATAGCAGCCTGAAGATAAATCTGGAGGAGACAAAACGCAAACGGGAAGAAGACCTAAAGACAGACAGAACAACCTCACAGGGAAAAGAAGGGAAAAAGCCAGTAATCCCAAGAGGGGAGTGTGAGGGAAATGACACGAGGAGAGAGAAACATGATGGAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22542
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | Essential Splice Site | None | 983 | 13 | 30 |
ENSDART00000112470 | Essential Splice Site | 500 | 1603 | 13 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48667247)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46744906 |
GRCz11 | 14 | 45732198 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAACGCCGAGCTGAGACGGCGACTGGAGCTCCTGCAGGCTGAACAAGAG[G/A]TCAGCGGATGTTTGGCCAGATTTATCCTCAGGCTACCACCTGGCTGATGT
Long Flanking Sequence:
TGGACGGGTCAATCAGTGCTTTTGAAAACACTGTCGGTTGGGTTTAGGGAAGGAGGAAGGTGGGTCAGTCGATCGGTCAGTCGACAGCGGCCTCTGTTGGATTTTCAGAACAGCAGGCGTGAATAGCACGCGAATGGGAAATTTGAGATCTCAAAAAGCGTACACAGCGGCAACTGGTGGATTTGCGAAAACAAAAACTGCAAAAAAACGTAGCTCCTGGAACGTATTTGGCATTCTCCAAAAATGTAAATAGGGGAACAGAATGAGCTTTCAGAATGAGCTTGGATTGTTTTTTTAGAGTGTAAGTAGGTTTATGAAAAAATGCCCTTGGAAATCAATCCTGACCTTGAAGTGTGTTTGTGCGTCTCTCTTACTTTGGTTCAGATCTGAAGCCCCTGAGTGAGGAGGTAAATGAGGCTTCCTCGTTGAGGCTTCTGGGAGCTGAAAACGAGAACGCCGAGCTGAGACGGCGACTGGAGCTCCTGCAGGCTGAACAAGAG[G/A]TCAGCGGATGTTTGGCCAGATTTATCCTCAGGCTACCACCTGGCTGATGTTAATTCTCAGGTCTCCCATGTACTGTATGTCTCTCTCTCTCTCTCTCACACACACAGGCTCAGCAGGGCCCAGAGAAAACCCAAGAGCTCCAGAGACTCACAGAGCAGCTCTCACAAAAGCTTCAAAACACCCTCAAGGAGGTGAGCCACTTCTGACAGATTTAAGGAGCGTTTTTTCCTTCTTTTTTCTGTGTCTACTGTCATTTTGTCCCCGTTTCAACTTTTTGAATCGGGCCCTGTCATTTCTCTTTTAACCGTTAGCTGGAGTGTCTGAAGAATGAAAATAGCAGCCTGAAGATAAATCTGGAGGAGACAAAACGCAAACGGGAAGAAGACCTAAAGACAGACAGAACAACCTCACAGGGAAAAGAAGGGAAAAAGCCAGTAATCCCAAGAGGGGAGTGTGAGGGAAATGACACGAGGAGAGAGAAACATGATGGAAAAGAAGGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45524
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | Nonsense | 711 | 983 | 25 | 30 |
ENSDART00000112470 | Nonsense | 1331 | 1603 | 24 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48699030)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46776689 |
GRCz11 | 14 | 45763981 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTAAAAAAATGTGACCGTAATTAATATCTTTATTATTTAGCTTCTCACG[C/T]AGCTGAAGGCAAACATGGAGGAGGAGAACCGACATCTAGTGGAGCAGAAT
Long Flanking Sequence:
CAAGACTGAAAACTCATCTGTTCAGCTGTGCATTTACTGAATGAGCACTGTGCTATGTCCAACAGATCGCACTATTATGTCTTTCTTTTCTTTTTAAATCTTTTATAACCTGTTTTAACACATTTTAAACTGTTTTGAATCAATTTTATTATTTGTTTTTATTTTCCTATACTTGTCTCTTTTATTGCTGTTTATGTGAATGGCCACTGTGTATGAAATGTGCTATATAGTAATATAGTATATAGTACAGTAAATAAACTTGCCTTGCCTATTATTAAGATATGAACTGTTTATAAATACATATTAAGCACATATTCTGCATTATCCTATTCTACATCCCTAATCCTTAATACCTAAACCCAACTACTACCTTAATAACTTTTAATAAGCAGCAAATAAGAAATTTATTGAGCTAAAATTAATAAGTTTGGTTTATTAATAAGAGTTATCCTTAAAAAAATGTGACCGTAATTAATATCTTTATTATTTAGCTTCTCACG[C/T]AGCTGAAGGCAAACATGGAGGAGGAGAACCGACATCTAGTGGAGCAGAATCAGAGTCTGGCCAAAGAAAACAAGGCTCTAATGGAGAGCAGCCTGGAGAGCCGAGACCAGCACCACAACCAGCAGAGAGAGTATCTGTACGAACACACACCGCTCACGTCTGTCCACAGCAGCGCATCAGTAAATAACACTCACCTCACCTCCGTCTGTGTGTCTCCACCGCAGGGATAAACTCAACGAGCTGCGCAGGGAGAAGCAGAAGCTGGTGGAGAAGATCATGGATCAGTATCGGGTCCTGGAGCCTGCTCTGCCCGCAATGAGTCCCCTTAAACAAGCAAAGTTAGTCAAGCAATCACAACTAATAATGTAATTTGTAGCAAACGCTGTGTTTTTTCATTGCATCAAACCATACTATAGTACTTGAATCAATCTGAGTTGAATTAACTATAGTGGTATAATACAAAATACGGTCGTTTTCAACATCTATAGGGCATATTATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2750
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | Nonsense | 908 | 983 | 28 | 30 |
ENSDART00000112470 | Nonsense | 1528 | 1603 | 27 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48704138)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46781797 |
GRCz11 | 14 | 45769089 |
KASP Assay ID:
554-2868.1 (used for ordering genotyping assays)
KASP Sequence:
TGGGCAAAGGCAGAGGAGRAGTTTCTCAGTCCTTCAGTCCAGGAGACCAG[C/T]GATCTCAGCCTCGCATCCGCCTGCGCTCCTCTCAGACAGGAGCCTCAGCC
Long Flanking Sequence:
AACTGCTTTTATTCAAAATACAAAATACAAAATAAAACAAATAAGACTTTCTAAATAATCTAAAGAAATAATATTATCAGACACACTGTGAAAAATTCCTTGCTCTGTTAAACATCATTTGGGAAATATTTAAAAAAATAATAATAATTAAAGGAGGTTAAATATGTCTTACTTCTATTTTATATAAAAGTCCATAATGATCTTTACCTCACCAGGTAGAGAAAATCAATAAATAAATAAAATGAAAAAAAAAAAAAAAATGAAATAAAAATCTTTATTTTACAACTCACTTTCCTCTATTTGACCCCTCAGTTCATGACCAGGACCCCATCAGCGCTCCAGTCTCTCCAAGCCCGCTGAGGAGAATTTCATATCAAGTTGAAGAAGAGCAACCTAAAGCTAATCTGCGGACCGGACGCCGCAAACTGGGTTCTCGGCATGGCTGGGCTCTGGGCAAAGGCAGAGGAGGAGTTTCTCAGTCCTTCAGTCCAGGAGACCAG[C/T]GATCTCAGCCTCGCATCCGCCTGCGCTCCTCTCAGACAGGAGCCTCAGCCCTCTGGGAGCACGACAGCAGCCCTACACCCAGCCAGGACAGCCCCAGTGAAGAGGGCAGAGGTAAACATGATGGTGGAGAGGGGAAATTACATGCATTTGAAAAGATGCTTTTGTGGAAAATATGTAACTGAAAAGATGAATTTGAAAACAAGCATTTGTGGAAAATAAGCATTTGAAAACATGCATTTGTGCAAATTATGCATTTAAAATATGCATTTATGGACAATATGCATTTGAAAACATGCAATTTTGAAAAATTTGTAATTAAAAATATGCATTCAAAAATATTCATTTGTTGAAAATATGCATTTGAAAATGCATTTATGGACAATATGCATTAGAAAACATGCATTTTTTGAAAAATATGCATTTGAGGAAAATATGCATTTATGGAAAATATGCATTTAAAAATATGCATTTGTGAAAATATACATTTAAAAATATGCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30985
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000110103 | Essential Splice Site | 967 | 983 | 29 | 30 |
ENSDART00000112470 | Essential Splice Site | 1587 | 1603 | 28 | 29 |
Genomic Location (Zv9):
Chromosome 14 (position 48704933)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 46782592 |
GRCz11 | 14 | 45769884 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCTCACCTGCACATTCAGACGTCAGTCGTGTTTCATCTGGAACTGAAGG[T/C]CAGTCTGTGACATTGGTAGAACAAATCAAAACATGCACATTTCTGATGCA
Long Flanking Sequence:
GCAATTTTGAAAAATTTGTAATTAAAAATATGCATTCAAAAATATTCATTTGTTGAAAATATGCATTTGAAAATGCATTTATGGACAATATGCATTAGAAAACATGCATTTTTTGAAAAATATGCATTTGAGGAAAATATGCATTTATGGAAAATATGCATTTAAAAATATGCATTTGTGAAAATATACATTTAAAAATATGCATTTGTAAAAATATACATTTAAAAATATGCATTTGTGAAAATATACATTTAAAATATGCATTTGTGAAAATATACATTTAAAAATATGCATTTGTGAAAAATAGGCAGTTAAATATTAGCATTCGTAGAGAATATGTGTTTGAAACTATGCATTTGTGGAAAACATTTATTTGAAAACATGCATTTGTATTCATTAGGAGCTGAGAGTAATATCTGTTTGTGTGTTTTAGTTGATAGTGAGGAGAACATCTCACCTGCACATTCAGACGTCAGTCGTGTTTCATCTGGAACTGAAGG[T/C]CAGTCTGTGACATTGGTAGAACAAATCAAAACATGCACATTTCTGATGCAAATGATACAATTACAATTGAACTTTTTACAGTTTCTTACAGAATATCAAGACTAGTACAATTATATATATATTTAAAATAAAGATTTATTTGGTATGTCTTTGAGTAAAATAATTCCGATCACCCCTTAGGAAGAGGTTCTCAAACAATTACGGAATAACATATGTTTAACCTATATTTGCTGGATTGGCTCTAATTTTCATCATAATAAATGTTTTTATTAGTTATGACTGAACATCAAGGTTATTCCAGCAATTATACATTTTGTAACTGTTAAGAAGTTAAAAAAAAAGTTTTAGATTTTTTTTATGTCTCAAACTAATAAAAACATCAGAAAACATGGCACCATTTTGGTTATTTTATTCATAGAAAGAAATGCTCTTAAATAACAACATGGCAACATGTTTGGATGATGATTTGACATATTACTATACCAGACCAAAACAAATAT
Associated Phenotype:
Not determined